Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9P685T24 Lonicera japonica HOM05D005586 ORTHO05D007044 0.0e+00 1226.8 631 100.0
Dinv41251 Davidia involucrata HOM05D005586 ORTHO05D007044 2.1e-293 1011.9 625 84.5
DCAR_017968 Daucus carota HOM05D005586 ORTHO05D007044 4.0e-292 1007.7 631 81.3
Lj7P472T26 Lonicera japonica HOM05D005586 ORTHO05D007044 4.1e-289 997.7 634 80.6
Dinv25464 Davidia involucrata HOM05D005586 ORTHO05D007044 2.3e-287 991.9 630 81.7
CSS0030464 Camellia sinensis var. sinensis HOM05D005586 ORTHO05D007044 1.9e-286 988.8 631 81.5
Rhsim07G0149700 Rhododendron simsii HOM05D005586 ORTHO05D007044 1.0e-279 966.5 629 79.8
CSS0000496 Camellia sinensis var. sinensis HOM05D005586 ORTHO05D007044 3.9e-279 964.5 631 80.0
ECA234G4574 Erigeron canadensis HOM05D005586 ORTHO05D007044 7.3e-278 960.3 633 78.7
Hma1.2p1_1025F.1_g249260 Hydrangea macrophylla HOM05D005586 ORTHO05D007044 1.1e-273 946.4 592 81.8
Lsat_1_v5_gn_5_84680 Lactuca sativa HOM05D005586 ORTHO05D007044 7.9e-272 940.3 637 76.9
TAR383G0761 Trochodendron aralioides HOM05D005586 ORTHO05D007044 2.5e-270 935.3 639 76.8
Lj4g0013239 Lotus japonicus HOM05D005586 ORTHO05D007044 5.6e-270 934.1 637 75.8
MELO3C017465.2 Cucumis melo HOM05D005586 ORTHO05D007044 8.1e-269 930.2 648 75.2
Cc06_g13260 Coffea canephora HOM05D005586 ORTHO05D007044 1.1e-268 929.9 642 76.6
Oeu025223.1 Olea europaea HOM05D005586 ORTHO05D007044 1.1e-268 929.9 644 75.2
Peaxi162Scf00231g00064 Petunia axillaris HOM05D005586 ORTHO05D007044 1.5e-267 926.0 645 74.4
TAR626G0800 Trochodendron aralioides HOM05D005586 ORTHO05D007044 2.0e-267 925.6 635 75.3
ClCG06G013320 Citrullus lanatus HOM05D005586 ORTHO05D007044 3.4e-267 924.9 648 74.4
PGSC0003DMG400011415 Solanum tuberosum HOM05D005586 ORTHO05D007044 9.9e-267 923.3 643 74.2
Solyc10g078790.1 Solanum lycopersicum HOM05D005586 ORTHO05D007044 1.7e-266 922.5 643 74.2
TWI60G0698 Tripterygium wilfordii HOM05D005586 ORTHO05D007044 2.2e-266 922.2 652 73.0
Sopen10g029410 Solanum pennellii HOM05D005586 ORTHO05D007044 4.9e-266 921.0 643 74.0
CsaV3_1G031580 Cucumis sativus L. HOM05D005586 ORTHO05D007044 6.4e-266 920.6 648 74.5
Glyma.17G063500 Glycine max HOM05D005586 ORTHO05D007044 8.4e-266 920.2 635 75.0
Sed0005590 Sechium edule HOM05D005586 ORTHO05D007044 8.4e-266 920.2 647 75.0
Aqoxy7G02326 Aquilegia oxysepala HOM05D005586 ORTHO05D007044 2.4e-265 918.7 636 74.4
Nitab4.5_0000730g0080 Nicotiana tabacum HOM05D005586 ORTHO05D007044 3.2e-265 918.3 645 73.8
Glyma.20G083600 Glycine max HOM05D005586 ORTHO05D007044 7.9e-264 913.7 635 74.5
PSO170G6484 Papaver somniferum HOM05D005586 ORTHO05D007044 1.3e-263 912.9 636 74.5
Lalb_Chr12g0199381 Lupinus albus HOM05D005586 ORTHO05D007044 1.8e-263 912.5 642 74.9
Potri.006G168200 Populus trichocarpa HOM05D005586 ORTHO05D007044 1.8e-263 912.5 660 72.7
PSO063G4043 Papaver somniferum HOM05D005586 ORTHO05D007044 1.5e-262 909.4 636 74.2
Atru.chr7.639 Acer truncatum HOM05D005586 ORTHO05D007044 1.3e-261 906.4 648 72.7
MSTRG.6212 Avicennia marina HOM05D005586 ORTHO05D007044 1.3e-261 906.4 642 73.8
Sed0016049 Sechium edule HOM05D005586 ORTHO05D007044 1.6e-261 906.0 648 72.4
Sabra06G0129800 Salix brachista HOM05D005586 ORTHO05D007044 3.7e-261 904.8 660 72.6
CAN.G1161.32 Capsicum annuum HOM05D005586 ORTHO05D007044 4.8e-261 904.4 649 72.4
CANSAT11G2700 Cannabis sativa HOM05D005586 ORTHO05D007044 1.1e-260 903.3 646 72.8
Oeu009835.1 Olea europaea HOM05D005586 ORTHO05D007044 1.1e-260 903.3 646 72.8
arahy.Tifrunner.gnm1.ann1.F5X18S Arachis hypogaea HOM05D005586 ORTHO05D007044 2.4e-260 902.1 642 74.1
Phvul.003G146100 Phaseolus vulgaris HOM05D005586 ORTHO05D007044 2.4e-260 902.1 635 73.9
CiPaw.07G192200 Carya illinoinensis HOM05D005586 ORTHO05D007044 5.3e-260 901.0 649 73.0
Ca_21173_v3 Cicer arietinum L. HOM05D005586 ORTHO05D007044 6.9e-260 900.6 638 73.0
Ca_21222_v3 Cicer arietinum L. HOM05D005586 ORTHO05D007044 6.9e-260 900.6 638 73.0
Duzib168G0896 Durio zibethinus HOM05D005586 ORTHO05D007044 1.5e-259 899.4 646 73.4
COL.COLO4_33680 Corchorus olitorius HOM05D005586 ORTHO05D007044 4.5e-259 897.9 646 73.1
RcHm_v2.0_Chr4g0402481 Rosa chinensis HOM05D005586 ORTHO05D007044 5.8e-259 897.5 646 72.9
SGA_v2.0_scaffold17G07909 Striga asiatica HOM05D005586 ORTHO05D007044 1.7e-258 896.0 631 72.9
Prupe.2G007900 Prunus persica HOM05D005586 ORTHO05D007044 2.9e-258 895.2 655 72.1
Medtr4g128210 Medicago truncatula HOM05D005586 ORTHO05D007044 8.4e-258 893.6 639 72.6
Nitab4.5_0004134g0010 Nicotiana tabacum HOM05D005586 ORTHO05D007044 1.4e-257 892.9 634 73.7
Eucgr.C02307 Eucalyptus grandis HOM05D005586 ORTHO05D007044 5.5e-257 891.0 650 71.8
Haze_22099 Corylus avellana HOM05D005586 ORTHO05D007044 2.1e-256 889.0 649 72.0
Ah.14g083790 Amaranthus hybridus HOM05D005586 ORTHO05D007044 4.6e-256 887.9 646 73.4
Nn4g25000 Nelumbo nucifera HOM05D005586 ORTHO05D007044 4.6e-256 887.9 615 75.3
Cfa013507 Carpinus fangiana HOM05D005586 ORTHO05D007044 6.0e-256 887.5 648 71.5
FAN18G4074 Fragaria x ananassa HOM05D005586 ORTHO05D007044 6.0e-256 887.5 650 72.6
Nitab4.5_0000455g0040 Nicotiana tabacum HOM05D005586 ORTHO05D007044 7.9e-256 887.1 635 73.5
Psat0s509g0200 Pisum sativum HOM05D005586 ORTHO05D007044 1.0e-255 886.7 638 72.4
FvH4_5g27790 Fragaria vesca HOM05D005586 ORTHO05D007044 1.3e-255 886.3 650 72.5
VMungo1215G0758 Vigna mungo HOM05D005586 ORTHO05D007044 1.3e-255 886.3 621 75.0
PGR102G3328 Punica granatum HOM05D005586 ORTHO05D007044 3.0e-255 885.2 635 73.7
Migut.J01477 Erythranthe guttata HOM05D005586 ORTHO05D007044 3.9e-255 884.8 642 70.9
FAN08G2362 Fragaria x ananassa HOM05D005586 ORTHO05D007044 3.9e-255 884.8 648 72.5
Ciclev10007551m.g Citrus clementina HOM05D005586 ORTHO05D007044 3.3e-254 881.7 650 71.1
Sc08g0005320 Simmondsia chinensis HOM05D005586 ORTHO05D007044 3.3e-254 881.7 634 73.8
Gohir.A08G084500 Gossypium hirsutum HOM05D005586 ORTHO05D007044 1.4e-252 876.3 648 70.8
THA.LOC104811789 Tarenaya hassleriana HOM05D005586 ORTHO05D007044 1.4e-252 876.3 649 70.1
Gorai.004G099900 Gossypium raimondii HOM05D005586 ORTHO05D007044 1.8e-252 875.9 648 71.1
GSVIVG01029208001 Vitis vinifera HOM05D005586 ORTHO05D007044 2.4e-252 875.5 633 74.2
QL02p097708 Quercus lobata HOM05D005586 ORTHO05D007044 9.0e-252 873.6 650 71.2
Cpa.g.sc95.50 Carica papaya HOM05D005586 ORTHO05D007044 4.5e-251 871.3 630 73.2
Aa31LG3G13340 Aethionema arabicum HOM05D005586 ORTHO05D007044 1.2e-248 863.2 649 69.6
Thecc.09G173100 Theobroma cacao HOM05D005586 ORTHO05D007044 3.0e-247 858.6 629 72.5
EL10Ac8g18286 Beta vulgaris HOM05D005586 ORTHO05D007044 6.7e-247 857.4 650 70.6
AL8G33420 Arabidopsis lyrata HOM05D005586 ORTHO05D007044 9.7e-246 853.6 653 68.5
Manes.14G153700 Manihot esculenta HOM05D005586 ORTHO05D007044 3.7e-245 851.7 631 71.0
AT5G57460 Arabidopsis thaliana HOM05D005586 ORTHO05D007044 4.8e-245 851.3 657 67.9
MD13G1254800 Malus domestica HOM05D005586 ORTHO05D007044 4.8e-245 851.3 630 71.7
CARHR271250 Cardamine hirsuta HOM05D005586 ORTHO05D007044 8.2e-245 850.5 660 67.7
MBI03_g13495_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 3.1e-244 848.6 641 69.7
BcaB08g36100 Brassica carinata HOM05D005586 ORTHO05D007044 1.2e-243 846.7 651 68.5
Sp6g19170 Schrenkiella parvula HOM05D005586 ORTHO05D007044 1.2e-243 846.7 651 67.9
BcaB01g04458 Brassica carinata HOM05D005586 ORTHO05D007044 2.0e-243 845.9 651 67.6
C03p14980 Brassica napus HOM05D005586 ORTHO05D007044 2.6e-243 845.5 654 67.7
C09p49310 Brassica napus HOM05D005586 ORTHO05D007044 3.4e-243 845.1 655 67.9
BcaC04g19966 Brassica carinata HOM05D005586 ORTHO05D007044 7.7e-243 844.0 657 67.7
A03p12820 Brassica napus HOM05D005586 ORTHO05D007044 1.3e-242 843.2 652 67.6
BolC3t13940H Brassica oleracea HOM05D005586 ORTHO05D007044 2.2e-242 842.4 653 67.5
BraA03t10590Z Brassica rapa HOM05D005586 ORTHO05D007044 2.2e-242 842.4 651 67.6
BraA10t43568Z Brassica rapa HOM05D005586 ORTHO05D007044 6.5e-242 840.9 650 68.5
BcaC01g06487 Brassica carinata HOM05D005586 ORTHO05D007044 8.5e-242 840.5 651 67.7
Carub.0008s1797 Capsella rubella HOM05D005586 ORTHO05D007044 8.5e-242 840.5 655 67.3
A10p14890 Brassica napus HOM05D005586 ORTHO05D007044 1.1e-241 840.1 653 67.8
Thhalv10015707m.g Eutrema salsugineum HOM05D005586 ORTHO05D007044 1.2e-240 836.6 652 66.6
Aa31LG3G220 Aethionema arabicum HOM05D005586 ORTHO05D007044 1.1e-238 830.1 647 67.7
Actinidia15717 Actinidia chinensis HOM05D005586 ORTHO05D007044 4.8e-237 824.7 615 72.4
TPR.G5407 Trifolium pratense HOM05D005586 ORTHO05D007044 6.3e-237 824.3 578 73.4
CDE04G2484 Ceratophyllum demersum HOM05D005586 ORTHO05D007044 5.3e-236 821.2 631 68.6
BolC9t57782H Brassica oleracea HOM05D005586 ORTHO05D007044 5.9e-235 817.8 655 66.6
Gohir.D08G094100 Gossypium hirsutum HOM05D005586 ORTHO05D007044 1.3e-229 800.0 648 66.7
AUR62021301 Chenopodium quinoa HOM05D005586 ORTHO05D007044 9.1e-228 793.9 645 66.8
Actinidia14649 Actinidia chinensis HOM05D005586 ORTHO05D007044 4.5e-227 791.6 528 78.2
AUR62033219 Chenopodium quinoa HOM05D005586 ORTHO05D007044 1.7e-226 789.6 645 66.5
PSO541G5977 Papaver somniferum HOM05D005586 ORTHO05D007044 1.5e-225 786.6 651 65.3
MBI14_g17367_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 6.1e-224 781.2 636 64.5
SHI41749 Sapria himalayana HOM05D005586 ORTHO05D007044 1.0e-223 780.4 651 64.8
SalBow1G5715 Salvia bowleyana HOM05D005586 ORTHO05D007044 7.5e-222 774.2 636 65.7
SalBow6G0691 Salvia bowleyana HOM05D005586 ORTHO05D007044 9.1e-220 767.3 634 65.0
Hma1.2p1_3184F.1_g333760 Hydrangea macrophylla HOM05D005586 ORTHO05D007044 3.6e-216 755.4 627 65.9
ATR0618G120 Amborella trichopoda HOM05D005586 ORTHO05D007044 3.0e-215 752.3 635 62.2
MD13G1254300 Malus domestica HOM05D005586 ORTHO05D007044 3.8e-210 735.3 644 63.4
SEGI_38070 Sequoiadendron giganteum HOM05D005586 ORTHO05D007044 9.5e-209 730.7 637 60.6
MBI18_g04576_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 8.9e-199 697.6 631 62.1
Zm00001eb414690 Zea mays HOM05D005586 ORTHO05D007044 2.9e-197 692.6 645 59.4
Os08g0243900 Oryza sativa ssp. japonica HOM05D005586 ORTHO05D007044 2.5e-193 679.5 645 58.1
CDE02G2425 Ceratophyllum demersum HOM05D005586 ORTHO05D007044 8.9e-183 644.4 640 57.5
BcaC01g06491 Brassica carinata HOM05D005586 ORTHO05D007044 8.7e-170 601.3 638 54.2
MBI16_g35931_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 7.3e-169 598.2 540 61.9
Mapoly0111s0055 Marchantia polymorpha HOM05D005586 ORTHO05D007044 1.6e-155 553.9 657 49.9
Pp3c25_4850 Physcomitrium patens HOM05D005586 ORTHO05D007044 2.1e-152 543.5 657 47.3
BcaC01g06494 Brassica carinata HOM05D005586 ORTHO05D007044 3.8e-149 532.7 643 50.9
AagrBONN_evm.TU.Sc2ySwM_368.670 Anthoceros agrestis HOM05D005586 ORTHO05D007044 9.0e-135 485.0 664 45.0
COL.COLO4_04392 Corchorus olitorius HOM05D005586 ORTHO05D007044 2.0e-118 430.6 364 63.7
unitig_899.g14852 Utricularia gibba HOM05D005586 ORTHO05D007044 3.0e-114 416.8 318 71.4
SMO228G0090 Selaginella moellendorffii HOM05D005586 ORTHO05D007044 2.4e-95 354.0 380 51.6
unitig_899.g14851 Utricularia gibba HOM05D005586 ORTHO05D007044 8.9e-90 335.5 244 66.8
HPP92_000781 Vanilla planifolia HOM05D005586 ORTHO05D007044 7.3e-68 262.7 296 52.0
CBR_g26159 Chara braunii HOM05D005586 ORTHO05D000002 9.6e-44 182.6 565 30.1
QL11p053068 Quercus lobata HOM05D005586 ORTHO05D007044 1.6e-38 165.2 118 74.6
MD16G1258000 Malus domestica HOM05D005586 ORTHO05D007044 3.0e-37 161.0 118 66.9
MD16G1258100 Malus domestica HOM05D005586 ORTHO05D007044 1.5e-20 105.5 113 52.2
Oeu013635.1 Olea europaea HOM05D006172 ORTHO05D005515 2.2e-19 101.7 94 60.6
CBR_g26157 Chara braunii HOM05D005586 ORTHO05D007044 6.7e-13 80.1 98 48.0
MBI16_g35933_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009834 1.2e-09 69.3 44 68.2
MBI16_g35934_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 6.5e-08 63.5 52 57.7


User provided reference genes

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