Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9P648T51 Lonicera japonica HOM05D002489 ORTHO05D002653 1.1e-70 270.0 148 100.0
Oeu013061.1 Olea europaea HOM05D002489 ORTHO05D002653 1.2e-16 90.5 122 47.5
Gohir.A06G173800 Gossypium hirsutum HOM05D002489 ORTHO05D002653 2.6e-16 89.4 136 43.4
Gorai.010G215200 Gossypium raimondii HOM05D002489 ORTHO05D002653 4.4e-16 88.6 136 44.1
Dinv02126 Davidia involucrata HOM05D002489 ORTHO05D002653 1.3e-15 87.0 121 47.1
Gohir.D04G018800 Gossypium hirsutum HOM05D002489 ORTHO05D002653 2.2e-15 86.3 126 44.4
Gohir.D06G183800 Gossypium hirsutum HOM05D002489 ORTHO05D002653 2.2e-15 86.3 136 42.6
Ciclev10002081m.g Citrus clementina HOM05D002489 ORTHO05D002653 3.7e-15 85.5 117 44.4
Dinv31993 Davidia involucrata HOM05D002489 ORTHO05D002653 8.3e-15 84.3 131 46.6
CiPaw.13G017100 Carya illinoinensis HOM05D002489 ORTHO05D002653 1.9e-14 83.2 101 50.5
Duzib128G0493 Durio zibethinus HOM05D002489 ORTHO05D002653 1.9e-14 83.2 154 48.1
Gorai.012G022300 Gossypium raimondii HOM05D002489 ORTHO05D002653 7.1e-14 81.3 130 42.3
FAN06G4066 Fragaria x ananassa HOM05D002489 ORTHO05D002653 9.2e-14 80.9 120 43.3
Gohir.A05G396200 Gossypium hirsutum HOM05D002489 ORTHO05D002653 2.1e-13 79.7 131 40.5
Duzib114G0058 Durio zibethinus HOM05D002489 ORTHO05D002653 2.7e-13 79.3 127 45.7
FvH4_7g04210 Fragaria vesca HOM05D002489 ORTHO05D002653 3.5e-13 79.0 120 42.5
Haze_02969 Corylus avellana HOM05D002489 ORTHO05D002653 6.0e-13 78.2 109 45.9
Thecc.10G138700 Theobroma cacao HOM05D002489 ORTHO05D002653 6.0e-13 78.2 140 42.9
vmacro13785 Vaccinium macrocarpon HOM05D002489 ORTHO05D002653 6.0e-13 78.2 121 46.3
Dinv31538 Davidia involucrata HOM05D002489 ORTHO05D002653 1.3e-12 77.0 121 44.6
FAN01G0190 Fragaria x ananassa HOM05D002489 ORTHO05D002653 1.3e-12 77.0 120 42.5
Atru.chr4.883 Acer truncatum HOM05D002489 ORTHO05D002653 1.7e-12 76.6 117 42.7
CSS0044836 Camellia sinensis var. sinensis HOM05D002489 ORTHO05D002653 2.3e-12 76.3 127 37.0
COL.COLO4_21328 Corchorus olitorius HOM05D002489 ORTHO05D002653 3.0e-12 75.9 116 44.0
FAN03G2991 Fragaria x ananassa HOM05D002489 ORTHO05D002653 3.0e-12 75.9 120 44.2
Cc00_g08160 Coffea canephora HOM05D002489 ORTHO05D002653 6.6e-12 74.7 121 38.8
FAN10G0477 Fragaria x ananassa HOM05D002489 ORTHO05D002653 1.1e-11 73.9 120 40.8
Rhsim07G0072000 Rhododendron simsii HOM05D002489 ORTHO05D002653 1.9e-11 73.2 118 43.2
Sabra03G0143000 Salix brachista HOM05D002489 ORTHO05D002653 3.3e-11 72.4 126 37.3
TWI15G0844 Tripterygium wilfordii HOM05D002489 ORTHO05D002653 5.6e-11 71.6 122 41.8
Prupe.2G047600 Prunus persica HOM05D002489 ORTHO05D002653 7.3e-11 71.2 152 36.8
Nn7g36989 Nelumbo nucifera HOM05D002489 ORTHO05D002653 9.5e-11 70.9 114 42.1
Glyma.06G311400 Glycine max HOM05D002489 ORTHO05D002653 1.6e-10 70.1 124 41.1
arahy.Tifrunner.gnm1.ann1.1YL9TV Arachis hypogaea HOM05D002489 ORTHO05D002653 2.8e-10 69.3 116 37.9
Sabra01G0023600 Salix brachista HOM05D002489 ORTHO05D002653 2.8e-10 69.3 136 35.3
arahy.Tifrunner.gnm1.ann1.M21JET Arachis hypogaea HOM05D002489 ORTHO05D002653 3.6e-10 68.9 116 37.9
Glyma.15G227300 Glycine max HOM05D002489 ORTHO05D002653 3.6e-10 68.9 111 44.1
TWI63G0515 Tripterygium wilfordii HOM05D002489 ORTHO05D002653 3.6e-10 68.9 119 40.3
MSTRG.5082 Avicennia marina HOM05D002489 ORTHO05D002653 6.2e-10 68.2 122 40.2
QL04p021817 Quercus lobata HOM05D002489 ORTHO05D002653 6.2e-10 68.2 129 39.5
RcHm_v2.0_Chr1g0328761 Rosa chinensis HOM05D002489 ORTHO05D002653 6.2e-10 68.2 130 37.7
CiPaw.14G010800 Carya illinoinensis HOM05D002489 ORTHO05D002653 8.1e-10 67.8 129 40.3
PGR031G2636 Punica granatum HOM05D002489 ORTHO05D002653 8.1e-10 67.8 118 39.8
Potri.003G192100 Populus trichocarpa HOM05D002489 ORTHO05D002653 1.1e-09 67.4 130 36.2
MSTRG.20493 Avicennia marina HOM05D002489 ORTHO05D002653 1.4e-09 67.0 103 45.6
Nn2g14603 Nelumbo nucifera HOM05D002489 ORTHO05D002653 1.8e-09 66.6 93 44.1
Duzib106G0143 Durio zibethinus HOM05D002489 ORTHO05D002653 2.4e-09 66.2 126 38.1
Lj3g0021581 Lotus japonicus HOM05D002489 ORTHO05D002653 2.4e-09 66.2 92 43.5
Ca_24030_v3 Cicer arietinum L. HOM05D002489 ORTHO05D002653 3.1e-09 65.9 136 37.5
Glyma.13G189400 Glycine max HOM05D002489 ORTHO05D002653 6.8e-09 64.7 106 43.4
MD07G1042300 Malus domestica HOM05D002489 ORTHO05D002653 8.9e-09 64.3 167 33.5
QL01p015995 Quercus lobata HOM05D002489 ORTHO05D002653 1.2e-08 63.9 95 44.2
DCAR_006595 Daucus carota HOM05D002489 ORTHO05D002653 1.5e-08 63.5 99 43.4
Cc01_g07160 Coffea canephora HOM05D002489 ORTHO05D002653 2.6e-08 62.8 82 43.9
Peaxi162Scf00978g00427 Petunia axillaris HOM05D002489 ORTHO05D002653 2.6e-08 62.8 84 44.0
Peaxi162Scf47032g00004 Petunia axillaris HOM05D002489 ORTHO05D002653 2.6e-08 62.8 84 44.0
Sed0016042 Sechium edule HOM05D002489 ORTHO05D002653 2.6e-08 62.8 125 35.2
GSVIVG01037394001 Vitis vinifera HOM05D002489 ORTHO05D002653 3.4e-08 62.4 70 45.7
Actinidia18374 Actinidia chinensis HOM05D002489 ORTHO05D002653 5.8e-08 61.6 95 44.2
HanXRQChr11g0341281 Helianthus annuus HOM05D002489 ORTHO05D002653 5.8e-08 61.6 135 39.3
LjContig00430g0026017 Lotus japonicus HOM05D002489 ORTHO05D002653 9.9e-08 60.8 125 36.8
Medtr3g012030 Medicago truncatula HOM05D002489 ORTHO05D002653 9.9e-08 60.8 126 38.9
TPR.G2578 Trifolium pratense HOM05D002489 ORTHO05D002653 9.9e-08 60.8 95 44.2
Nitab4.5_0002567g0120 Nicotiana tabacum HOM05D002489 ORTHO05D002653 1.3e-07 60.5 128 34.4
VMungo1127G1287 Vigna mungo HOM05D002489 ORTHO05D002653 1.3e-07 60.5 128 39.1
CsaV3_6G038670 Cucumis sativus L. HOM05D002489 ORTHO05D002653 1.7e-07 60.1 90 40.0
Migut.N01867 Erythranthe guttata HOM05D002489 ORTHO05D002653 1.7e-07 60.1 122 34.4
Manes.04G155300 Manihot esculenta HOM05D002489 ORTHO05D002653 1.7e-07 60.1 131 34.4
Cfa010969 Carpinus fangiana HOM05D002489 ORTHO05D002653 2.2e-07 59.7 123 35.0
Dinv15412 Davidia involucrata HOM05D002489 ORTHO05D002653 2.2e-07 59.7 88 40.9
Lalb_Chr03g0032591 Lupinus albus HOM05D002489 ORTHO05D002653 2.2e-07 59.7 128 34.4
Psat5g224160 Pisum sativum HOM05D002489 ORTHO05D002653 2.9e-07 59.3 130 40.0
MELO3C014530.2 Cucumis melo HOM05D002489 ORTHO05D002653 3.8e-07 58.9 90 40.0
Ca_14212_v3 Cicer arietinum L. HOM05D002489 ORTHO05D002653 6.4e-07 58.2 124 37.1
Aqoxy2G00026_Aqoxy2G00027 Aquilegia oxysepala HOM05D002489 ORTHO05D002653 8.4e-07 57.8 70 45.7
LjContig00564g0014208 Lotus japonicus HOM05D002489 ORTHO05D002653 8.4e-07 57.8 98 38.8
ClCG02G022540 Citrullus lanatus HOM05D002489 ORTHO05D002653 1.1e-06 57.4 102 31.4
Eucgr.J00664 Eucalyptus grandis HOM05D002489 ORTHO05D002653 1.1e-06 57.4 79 41.8
Sed0020453 Sechium edule HOM05D002489 ORTHO05D002653 1.1e-06 57.4 129 31.8
vmacro04096 Vaccinium macrocarpon HOM05D002489 ORTHO05D002653 1.4e-06 57.0 95 35.8
DCAR_025311 Daucus carota HOM05D002489 ORTHO05D002653 1.9e-06 56.6 96 35.4
MBI19_g39605_MAGBIO Magnolia biondii HOM05D002489 ORTHO05D002653 1.9e-06 56.6 131 34.4
Hma1.2p1_2592F.1_g325030 Hydrangea macrophylla HOM05D002489 ORTHO05D002653 2.4e-06 56.2 132 34.8
CAN.G280.1 Capsicum annuum HOM05D002489 ORTHO05D002653 3.2e-06 55.8 122 33.6
Glyma.02G277000 Glycine max HOM05D002489 ORTHO05D002653 3.2e-06 55.8 127 34.6
Lalb_Chr18g0048111 Lupinus albus HOM05D002489 ORTHO05D002653 3.2e-06 55.8 118 31.4
MD02G1273400 Malus domestica HOM05D002489 ORTHO05D002653 4.2e-06 55.5 168 31.5
PSO675G1019 Papaver somniferum HOM05D002489 ORTHO05D002653 4.2e-06 55.5 116 30.2
TPR.G9952 Trifolium pratense HOM05D002489 ORTHO05D002653 4.2e-06 55.5 124 37.1
Hund13412 Selenicereus undatus HOM05D002489 ORTHO05D002653 5.4e-06 55.1 94 39.4
COL.COLO4_33264 Corchorus olitorius HOM05D002489 ORTHO05D002653 7.1e-06 54.7 89 38.2
Hma1.2p1_1468F.1_g285540 Hydrangea macrophylla HOM05D002489 ORTHO05D002653 7.1e-06 54.7 86 41.9
MBI13_g00894_MAGBIO Magnolia biondii HOM05D002489 ORTHO05D002653 7.1e-06 54.7 130 32.3
MSTRG.16971 Avicennia marina HOM05D002489 ORTHO05D002653 9.2e-06 54.3 129 32.6
ClCG11G013040 Citrullus lanatus HOM05D002489 ORTHO05D002653 9.2e-06 54.3 127 31.5
Rhsim13G0202300 Rhododendron simsii HOM05D002489 ORTHO05D002653 9.2e-06 54.3 95 33.7


User provided reference genes

Program Settings