Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9P543T41 Lonicera japonica HOM05D007364 ORTHO05D009275 1.9e-44 182.2 98 100.0
Thecc.06G054700 Theobroma cacao HOM05D007364 ORTHO05D009275 6.3e-19 97.4 107 51.4
Lsat_1_v5_gn_4_106261 Lactuca sativa HOM05D007364 ORTHO05D009275 2.4e-18 95.5 95 54.7
Nitab4.5_0011805g0010 Nicotiana tabacum HOM05D007364 ORTHO05D009275 3.1e-18 95.1 102 50.0
Peaxi162Scf00062g00099 Petunia axillaris HOM05D007364 ORTHO05D009275 5.3e-18 94.4 102 49.0
Manes.14G008700 Manihot esculenta HOM05D007364 ORTHO05D009275 9.1e-18 93.6 100 54.0
Sopen12g034580 Solanum pennellii HOM05D007364 ORTHO05D009275 1.6e-17 92.8 104 47.1
Solyc12g099960.1 Solanum lycopersicum HOM05D007364 ORTHO05D009275 2.0e-17 92.4 104 47.1
PGSC0003DMG400004654 Solanum tuberosum HOM05D007364 ORTHO05D009275 2.0e-17 92.4 104 47.1
Duzib235G1177 Durio zibethinus HOM05D007364 ORTHO05D009275 5.9e-17 90.9 103 48.5
TWI38G2254 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 5.9e-17 90.9 101 49.5
Cc09_g07400 Coffea canephora HOM05D007364 ORTHO05D009275 1.7e-16 89.4 102 52.0
Haze_16200 Corylus avellana HOM05D007364 ORTHO05D009275 1.7e-16 89.4 102 50.0
Gohir.A05G115400 Gossypium hirsutum HOM05D007364 ORTHO05D009275 1.7e-16 89.4 103 50.5
Gohir.D05G115800 Gossypium hirsutum HOM05D007364 ORTHO05D009275 2.2e-16 89.0 103 50.5
Atru.chr1.2614 Acer truncatum HOM05D007364 ORTHO05D009275 2.9e-16 88.6 103 44.7
Gorai.009G119800 Gossypium raimondii HOM05D007364 ORTHO05D009275 2.9e-16 88.6 100 52.0
Cfa003431 Carpinus fangiana HOM05D007364 ORTHO05D009275 6.5e-16 87.4 102 50.0
TWI63G0101 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 8.5e-16 87.0 101 48.5
DCAR_001424 Daucus carota HOM05D007364 ORTHO05D009275 1.1e-15 86.7 108 43.5
HanXRQChr04g0125291 Helianthus annuus HOM05D007364 ORTHO05D009275 1.1e-15 86.7 95 56.8
TAR625G0136 Trochodendron aralioides HOM05D007364 ORTHO05D009275 1.9e-15 85.9 101 48.5
CAN.G484.12 Capsicum annuum HOM05D007364 ORTHO05D009275 2.5e-15 85.5 104 44.2
Ah.15g094280 Amaranthus hybridus HOM05D007364 ORTHO05D009275 3.2e-15 85.1 101 45.5
Aqoxy2G03840 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 3.2e-15 85.1 101 51.5
Aqoxy5G03758 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 3.2e-15 85.1 101 51.5
Ciclev10013953m.g Citrus clementina HOM05D007364 ORTHO05D009275 5.5e-15 84.3 103 43.7
Lj4g0012611 Lotus japonicus HOM05D007364 ORTHO05D009275 7.2e-15 84.0 102 52.0
arahy.Tifrunner.gnm1.ann1.TFQ65X Arachis hypogaea HOM05D007364 ORTHO05D009275 1.2e-14 83.2 102 51.0
Phvul.002G258200 Phaseolus vulgaris HOM05D007364 ORTHO05D009275 1.6e-14 82.8 102 49.0
Glyma.05G173100 Glycine max HOM05D007364 ORTHO05D009275 2.1e-14 82.4 102 47.1
arahy.Tifrunner.gnm1.ann1.A7U39C Arachis hypogaea HOM05D007364 ORTHO05D009275 3.6e-14 81.6 102 50.0
EL10Ac7g18129 Beta vulgaris HOM05D007364 ORTHO05D009275 3.6e-14 81.6 101 47.5
Ca_17791_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 3.6e-14 81.6 102 46.1
Ca_29552_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 3.6e-14 81.6 102 46.1
ClCG07G014710 Citrullus lanatus HOM05D007364 ORTHO05D009275 3.6e-14 81.6 102 45.1
Glyma.08G130400 Glycine max HOM05D007364 ORTHO05D009275 3.6e-14 81.6 102 47.1
Lalb_Chr07g0185511 Lupinus albus HOM05D007364 ORTHO05D009275 3.6e-14 81.6 102 51.0
VMungo0251G1224 Vigna mungo HOM05D007364 ORTHO05D009275 3.6e-14 81.6 102 49.0
Actinidia21894 Actinidia chinensis HOM05D007364 ORTHO05D009275 4.7e-14 81.3 101 47.5
MBI16_g18204_MAGBIO Magnolia biondii HOM05D007364 ORTHO05D009275 4.7e-14 81.3 106 45.3
TAR636G2112 Trochodendron aralioides HOM05D007364 ORTHO05D009275 4.7e-14 81.3 101 49.5
unitig_26.g10058 Utricularia gibba HOM05D007364 ORTHO05D009275 4.7e-14 81.3 96 49.0
TPR.G6288 Trifolium pratense HOM05D007364 ORTHO05D009275 8.0e-14 80.5 102 47.1
COL.COLO4_38285 Corchorus olitorius HOM05D007364 ORTHO05D009275 1.0e-13 80.1 100 46.0
AUR62001324 Chenopodium quinoa HOM05D007364 ORTHO05D009275 1.8e-13 79.3 101 46.5
CANSAT78G1269 Cannabis sativa HOM05D007364 ORTHO05D009275 3.0e-13 78.6 98 46.9
Migut.I01209 Erythranthe guttata HOM05D007364 ORTHO05D009275 3.0e-13 78.6 103 43.7
Psat7g058640 Pisum sativum HOM05D007364 ORTHO05D009275 3.0e-13 78.6 102 47.1
AUR62025707 Chenopodium quinoa HOM05D007364 ORTHO05D009275 4.0e-13 78.2 101 45.5
Potri.010G254100 Populus trichocarpa HOM05D007364 ORTHO05D009275 4.0e-13 78.2 100 42.0
QL05p088447 Quercus lobata HOM05D007364 ORTHO05D009275 6.8e-13 77.4 102 44.1
Oeu047568.2 Olea europaea HOM05D007364 ORTHO05D009275 8.8e-13 77.0 100 47.0
MELO3C010416.2 Cucumis melo HOM05D007364 ORTHO05D009275 1.2e-12 76.6 98 44.9
THA.LOC104812333 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 1.5e-12 76.3 102 43.1
FvH4_6g36820 Fragaria vesca HOM05D007364 ORTHO05D009275 2.0e-12 75.9 97 48.5
FAN02G1908 Fragaria x ananassa HOM05D007364 ORTHO05D009275 2.0e-12 75.9 97 48.5
FAN05G2474 Fragaria x ananassa HOM05D007364 ORTHO05D009275 2.0e-12 75.9 97 48.5
FAN14G5026 Fragaria x ananassa HOM05D007364 ORTHO05D009275 2.0e-12 75.9 97 48.5
CARHR017250 Cardamine hirsuta HOM05D007364 ORTHO05D009275 3.4e-12 75.1 99 42.4
C05p15020 Brassica napus HOM05D007364 ORTHO05D009275 4.4e-12 74.7 99 43.4
BolC5t30217H Brassica oleracea HOM05D007364 ORTHO05D009275 4.4e-12 74.7 99 43.4
PSO063G5199 Papaver somniferum HOM05D007364 ORTHO05D009275 4.4e-12 74.7 99 44.4
PSO170G0377 Papaver somniferum HOM05D007364 ORTHO05D009275 4.4e-12 74.7 99 44.4
PGR031G1732 Punica granatum HOM05D007364 ORTHO05D009275 4.4e-12 74.7 99 45.5
SalBow6G2338 Salvia bowleyana HOM05D007364 ORTHO05D009275 4.4e-12 74.7 104 44.2
BraA06t24432Z Brassica rapa HOM05D007364 ORTHO05D009275 5.7e-12 74.3 99 43.4
Carub.0001s1652 Capsella rubella HOM05D007364 ORTHO05D009275 5.7e-12 74.3 99 41.4
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 9.8e-12 73.6 100 43.0
Thhalv10009015m.g Eutrema salsugineum HOM05D007364 ORTHO05D009275 9.8e-12 73.6 99 41.4
A06p12720 Brassica napus HOM05D007364 ORTHO05D009275 1.3e-11 73.2 99 42.4
Eucgr.J03185 Eucalyptus grandis HOM05D007364 ORTHO05D009275 1.3e-11 73.2 98 45.9
Nitab4.5_0001925g0240 Nicotiana tabacum HOM05D007364 ORTHO05D009275 1.3e-11 73.2 87 44.8
AT1G16790 Arabidopsis thaliana HOM05D007364 ORTHO05D009275 1.7e-11 72.8 99 41.4
BcaC07g38817 Brassica carinata HOM05D007364 ORTHO05D009275 1.7e-11 72.8 100 42.0
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 1.7e-11 72.8 100 42.0
AL1G28960 Arabidopsis lyrata HOM05D007364 ORTHO05D009275 2.2e-11 72.4 99 40.4
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 2.2e-11 72.4 100 41.0
Aa31LG7G1240 Aethionema arabicum HOM05D007364 ORTHO05D009275 2.8e-11 72.0 102 43.1
Sp1g14930 Schrenkiella parvula HOM05D007364 ORTHO05D009275 2.8e-11 72.0 99 42.4
ECA232G2752 Erigeron canadensis HOM05D007364 ORTHO05D009275 4.8e-11 71.2 95 48.4
Prupe.3G024300 Prunus persica HOM05D007364 ORTHO05D009275 1.1e-10 70.1 99 43.4
Actinidia38815 Actinidia chinensis HOM05D007364 ORTHO05D009275 1.8e-10 69.3 96 43.8
Hma1.2p1_0191F.1_g083440 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 2.4e-10 68.9 111 40.5
Hma1.2p1_3076F.1_g332395 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 2.4e-10 68.9 111 40.5
BcaB03g13030 Brassica carinata HOM05D007364 ORTHO05D009275 3.1e-10 68.6 100 39.0
MD09G1166600 Malus domestica HOM05D007364 ORTHO05D009275 3.1e-10 68.6 102 39.2
RcHm_v2.0_Chr2g0149211 Rosa chinensis HOM05D007364 ORTHO05D009275 3.1e-10 68.6 97 43.3
SGA_v2.0_scaffold71G23970 Striga asiatica HOM05D007364 ORTHO05D009275 9.1e-10 67.0 111 38.7
SalBow7G1183 Salvia bowleyana HOM05D003223 ORTHO05D004865 1.6e-09 66.2 104 40.4
THA.LOC104808105 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 2.7e-09 65.5 91 45.1
FAN09G0058 Fragaria x ananassa HOM05D007364 ORTHO05D009275 3.5e-09 65.1 78 51.3
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 7.7e-09 63.9 75 49.3
HPP92_017099 Vanilla planifolia HOM05D007364 ORTHO05D009275 1.0e-08 63.5 101 36.6
HPP92_017109 Vanilla planifolia HOM05D007364 ORTHO05D009275 1.7e-08 62.8 100 35.0
BcaB02g06675 Brassica carinata HOM05D007364 ORTHO05D009275 2.2e-08 62.4 84 44.0
Sc15g0001160 Simmondsia chinensis HOM05D000912 ORTHO05D008392 2.2e-08 62.4 90 38.9
Atru.chr2.3597 Acer truncatum HOM05D007364 ORTHO05D009275 1.1e-07 60.1 64 48.4
BcaC05g25538 Brassica carinata HOM05D007364 ORTHO05D009275 1.2e-06 56.6 75 46.7
Sed0001602 Sechium edule HOM05D007364 ORTHO05D009275 2.1e-06 55.8 92 39.1
CiPaw.01G094100 Carya illinoinensis HOM05D007364 ORTHO05D009275 3.6e-06 55.1 74 41.9
CsaV3_4G028750 Cucumis sativus L. HOM05D007364 ORTHO05D009275 8.0e-06 53.9 67 43.3


User provided reference genes

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