Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9P523T21 Lonicera japonica HOM05D002498 ORTHO05D002553 3.3e-86 322.0 205 100.0
Dinv30674 Davidia involucrata HOM05D002498 ORTHO05D002553 2.4e-20 103.2 238 52.5
Dinv34334 Davidia involucrata HOM05D002498 ORTHO05D002553 2.4e-20 103.2 238 52.5
Actinidia39082 Actinidia chinensis HOM05D002498 ORTHO05D002553 8.0e-16 88.2 205 53.2
Lj5C37T8 Lonicera japonica HOM05D002498 ORTHO05D002553 2.0e-14 83.6 190 49.5
Hma1.2p1_0496F.1_g166220 Hydrangea macrophylla HOM05D002498 ORTHO05D002553 3.4e-14 82.8 215 40.9
Hma1.2p1_0291F.1_g115140 Hydrangea macrophylla HOM05D002498 ORTHO05D002553 7.5e-14 81.6 204 47.1
Lsat_1_v5_gn_1_38060 Lactuca sativa HOM05D002498 ORTHO05D002553 2.4e-12 76.6 203 50.2
Actinidia26030 Actinidia chinensis HOM05D002498 ORTHO05D002553 7.0e-12 75.1 216 50.9
Potri.001G169900 Populus trichocarpa HOM05D002498 ORTHO05D002553 2.7e-11 73.2 213 39.9
Potri.003G064100 Populus trichocarpa HOM05D002498 ORTHO05D002553 2.7e-11 73.2 107 55.1
Gohir.A06G193600 Gossypium hirsutum HOM05D002498 ORTHO05D002553 1.3e-10 70.9 117 51.3
A06p13370 Brassica napus HOM05D002498 ORTHO05D002553 5.0e-10 68.9 99 53.5
BraA06t24489Z Brassica rapa HOM05D002498 ORTHO05D002553 5.0e-10 68.9 99 53.5
HanXRQChr04g0094561 Helianthus annuus HOM05D002498 ORTHO05D002553 5.0e-10 68.9 204 42.2
Thecc.06G119300 Theobroma cacao HOM05D002498 ORTHO05D002553 6.6e-10 68.6 119 49.6
GSVIVG01016770001 Vitis vinifera HOM05D002498 ORTHO05D002553 8.6e-10 68.2 207 39.1
Gorai.010G235100 Gossypium raimondii HOM05D002498 ORTHO05D002553 1.5e-09 67.4 119 49.6
THA.LOC104813958 Tarenaya hassleriana HOM05D002498 ORTHO05D002553 2.5e-09 66.6 100 50.0
Gohir.D06G201400 Gossypium hirsutum HOM05D002498 ORTHO05D002553 4.3e-09 65.9 117 49.6
MD17G1168400 Malus domestica HOM05D002498 ORTHO05D002553 4.3e-09 65.9 228 41.7
TAR633G2028 Trochodendron aralioides HOM05D002498 ORTHO05D002553 5.6e-09 65.5 206 38.3
TAR636G1942 Trochodendron aralioides HOM05D002498 ORTHO05D002553 7.3e-09 65.1 223 45.7
C05p15830 Brassica napus HOM05D002498 ORTHO05D002553 3.6e-08 62.8 102 48.0
BolC5t30289H Brassica oleracea HOM05D002498 ORTHO05D002553 3.6e-08 62.8 102 48.0
Sabra03G0037700 Salix brachista HOM05D002498 ORTHO05D002553 3.6e-08 62.8 87 54.0
Cpa.g.sc25.112 Carica papaya HOM05D002498 ORTHO05D002553 4.7e-08 62.4 106 52.8
CAN.G862.29 Capsicum annuum HOM05D002498 ORTHO05D002553 6.1e-08 62.0 132 46.2
CARHR018030 Cardamine hirsuta HOM05D002498 ORTHO05D002553 6.1e-08 62.0 201 38.8
FAN05G3736 Fragaria x ananassa HOM05D002498 ORTHO05D002553 6.1e-08 62.0 214 37.4
Atru.chr1.3950 Acer truncatum HOM05D002498 ORTHO05D002553 8.0e-08 61.6 122 47.5
CiPaw.01G219200 Carya illinoinensis HOM05D002498 ORTHO05D002553 4.0e-07 59.3 101 50.5
ClCG09G000950 Citrullus lanatus HOM05D002498 ORTHO05D002553 4.0e-07 59.3 213 41.8
Sp1g15580 Schrenkiella parvula HOM05D002498 ORTHO05D002553 4.0e-07 59.3 200 43.5
CsaV3_7G034500 Cucumis sativus L. HOM05D002498 ORTHO05D002553 6.8e-07 58.5 212 40.6
MD09G1184100 Malus domestica HOM05D002498 ORTHO05D002553 6.8e-07 58.5 231 39.4
Ca_23371_v3 Cicer arietinum L. HOM05D002498 ORTHO05D002553 8.9e-07 58.2 106 51.9
Duzib192G0999 Durio zibethinus HOM05D002498 ORTHO05D002553 8.9e-07 58.2 115 47.8
COL.COLO4_30763 Corchorus olitorius HOM05D002498 ORTHO05D002553 1.2e-06 57.8 119 45.4
Manes.11G020700 Manihot esculenta HOM05D002498 ORTHO05D002553 1.5e-06 57.4 107 46.7
Phvul.010G130700 Phaseolus vulgaris HOM05D002498 ORTHO05D002553 1.5e-06 57.4 202 37.6
Sabra01G0141500 Salix brachista HOM05D002498 ORTHO05D002553 1.5e-06 57.4 215 38.1
Sed0015077 Sechium edule HOM05D002498 ORTHO05D002553 2.0e-06 57.0 214 39.3
Migut.I01070 Erythranthe guttata HOM05D002498 ORTHO05D002553 2.6e-06 56.6 142 41.5
Ciclev10025234m.g Citrus clementina HOM05D002498 ORTHO05D002553 3.4e-06 56.2 107 52.3
Aa31LG4G2990 Aethionema arabicum HOM05D002498 ORTHO05D002553 5.7e-06 55.5 219 34.7
Duzib235G0745 Durio zibethinus HOM05D002498 ORTHO05D002553 5.7e-06 55.5 120 45.8
Gohir.D10G055000 Gossypium hirsutum HOM05D002498 ORTHO05D002553 5.7e-06 55.5 112 46.4
Gorai.011G058700 Gossypium raimondii HOM05D002498 ORTHO05D002553 5.7e-06 55.5 112 46.4
CANSAT56G2749 Cannabis sativa HOM05D002498 ORTHO05D002553 7.5e-06 55.1 151 40.4
THA.LOC104808053 Tarenaya hassleriana HOM05D002498 ORTHO05D002553 9.8e-06 54.7 181 48.1


User provided reference genes

Program Settings