Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9P440T28 Lonicera japonica HOM05D000345 ORTHO05D000215 5.6e-98 360.9 181 100.0
CSS0001744 Camellia sinensis var. sinensis HOM05D000345 ORTHO05D000215 5.6e-29 131.7 200 48.0
QL10p019856 Quercus lobata HOM05D000345 ORTHO05D000215 1.4e-24 117.1 210 44.3
Nitab4.5_0001485g0060 Nicotiana tabacum HOM05D000345 ORTHO05D000215 2.7e-23 112.8 192 43.2
Actinidia35041 Actinidia chinensis HOM05D000345 ORTHO05D000215 1.1e-21 107.5 203 41.9
Nitab4.5_0007160g0050 Nicotiana tabacum HOM05D000345 ORTHO05D000215 1.5e-21 107.1 201 41.8
TAR371G0572 Trochodendron aralioides HOM05D000345 ORTHO05D000215 1.9e-21 106.7 197 43.1
DCAR_023118 Daucus carota HOM05D000345 ORTHO05D000215 2.5e-21 106.3 189 42.9
CSS0027512 Camellia sinensis var. sinensis HOM05D000345 ORTHO05D000215 3.3e-21 105.9 182 43.4
CSS0044647 Camellia sinensis var. sinensis HOM05D000345 ORTHO05D000215 3.3e-21 105.9 182 43.4
Thecc.03G103800 Theobroma cacao HOM05D000345 ORTHO05D000215 3.3e-21 105.9 204 41.2
Gohir.A12G183300 Gossypium hirsutum HOM05D000345 ORTHO05D000215 7.3e-21 104.8 166 41.6
Duzib205G0744 Durio zibethinus HOM05D000345 ORTHO05D000215 1.6e-20 103.6 201 41.8
Cfa019349 Carpinus fangiana HOM05D000345 ORTHO05D000215 4.7e-20 102.1 162 45.7
Atru.chr9.545 Acer truncatum HOM05D000345 ORTHO05D000215 6.2e-20 101.7 196 41.3
Haze_07740 Corylus avellana HOM05D000345 ORTHO05D000215 3.1e-19 99.4 204 40.7
VMungo1309G0504 Vigna mungo HOM05D000345 ORTHO05D000215 4.0e-19 99.0 206 40.8
Phvul.009G202200 Phaseolus vulgaris HOM05D000345 ORTHO05D000215 5.2e-19 98.6 206 40.8
Gohir.D12G186300 Gossypium hirsutum HOM05D000345 ORTHO05D000215 8.9e-19 97.8 166 40.4
TAR629G1889 Trochodendron aralioides HOM05D000345 ORTHO05D000215 2.0e-18 96.7 195 41.5
CiPaw.12G009000 Carya illinoinensis HOM05D000345 ORTHO05D000215 3.4e-18 95.9 208 37.5
Nn4g23449 Nelumbo nucifera HOM05D000345 ORTHO05D000215 4.4e-18 95.5 199 42.2
Manes.14G086500 Manihot esculenta HOM05D000345 ORTHO05D000215 9.9e-18 94.4 206 39.3
Gorai.008G199700 Gossypium raimondii HOM05D000345 ORTHO05D000215 2.9e-17 92.8 169 39.6
Eucgr.B00608 Eucalyptus grandis HOM05D000345 ORTHO05D000215 3.7e-17 92.4 208 38.0
Glyma.04G161400 Glycine max HOM05D000345 ORTHO05D000215 3.2e-16 89.4 214 39.7
Medtr3g026050 Medicago truncatula HOM05D000345 ORTHO05D000215 3.5e-15 85.9 171 41.5
GSVIVG01032911001 Vitis vinifera HOM05D000345 ORTHO05D000215 3.5e-15 85.9 169 42.6
Lalb_Chr12g0197261 Lupinus albus HOM05D000345 ORTHO05D000215 4.6e-15 85.5 186 40.9
Glyma.06G204300 Glycine max HOM05D000345 ORTHO05D000215 6.0e-15 85.1 223 38.1
Duzib068G0919 Durio zibethinus HOM05D000345 ORTHO05D000215 7.8e-15 84.7 207 36.7
Sabra15G0084300 Salix brachista HOM05D000345 ORTHO05D000215 7.8e-15 84.7 154 44.8
Cc09_g09490 Coffea canephora HOM05D000345 ORTHO05D000215 1.0e-14 84.3 148 43.9
TPR.G12176 Trifolium pratense HOM05D000345 ORTHO05D000215 1.7e-14 83.6 224 37.9
MSTRG.4484 Avicennia marina HOM05D000345 ORTHO05D000215 2.3e-14 83.2 177 38.4
Aqoxy3G03676 Aquilegia oxysepala HOM05D000345 ORTHO05D000215 1.1e-13 80.9 195 37.4
MBI19_g25292_MAGBIO Magnolia biondii HOM05D000345 ORTHO05D000215 1.1e-13 80.9 192 37.5
MD14G1213400 Malus domestica HOM05D000345 ORTHO05D000215 1.5e-13 80.5 220 34.5
MSTRG.9597 Avicennia marina HOM05D000345 ORTHO05D000215 4.3e-13 79.0 188 40.4
CiPaw.11G054900 Carya illinoinensis HOM05D000345 ORTHO05D000215 4.3e-13 79.0 189 37.6
MD06G1226300 Malus domestica HOM05D000345 ORTHO05D000215 5.6e-13 78.6 161 36.0
Cpa.g.sc14.188 Carica papaya HOM05D000345 ORTHO05D000215 7.3e-13 78.2 176 35.8
Duzib264G0963 Durio zibethinus HOM05D000345 ORTHO05D000215 9.6e-13 77.8 199 36.7
Psat5g205080 Pisum sativum HOM05D000345 ORTHO05D000215 9.6e-13 77.8 219 36.5
Prupe.5G206400 Prunus persica HOM05D000345 ORTHO05D000215 1.2e-12 77.4 167 38.9
HanXRQChr09g0270421 Helianthus annuus HOM05D000345 ORTHO05D000215 2.8e-12 76.3 157 42.0
Lalb_Chr13g0302791 Lupinus albus HOM05D000345 ORTHO05D000215 3.6e-12 75.9 205 39.5
Oeu017186.1 Olea europaea HOM05D000345 ORTHO05D000215 2.4e-11 73.2 161 39.8
Hund09924 Selenicereus undatus HOM05D000345 ORTHO05D000215 4.0e-11 72.4 188 39.9
Lsat_1_v5_gn_4_110881 Lactuca sativa HOM05D000345 ORTHO05D000215 5.2e-11 72.0 165 40.0
Sabra17G0084000 Salix brachista HOM05D000345 ORTHO05D000215 1.2e-10 70.9 181 34.8
HanXRQChr16g0502471 Helianthus annuus HOM05D000345 ORTHO05D000215 1.5e-10 70.5 138 41.3
CSS0017069 Camellia sinensis var. sinensis HOM05D000345 ORTHO05D000215 3.4e-10 69.3 189 30.7
Nn3g17467 Nelumbo nucifera HOM05D000345 ORTHO05D000215 4.4e-10 68.9 204 35.8
Haze_14421 Corylus avellana HOM05D000345 ORTHO05D000215 5.8e-10 68.6 167 34.1
Glyma.17G079900 Glycine max HOM05D000345 ORTHO05D000215 5.8e-10 68.6 196 35.7
Oeu044880.1 Olea europaea HOM05D000345 ORTHO05D000215 7.6e-10 68.2 141 44.0
Duzib187G1165 Durio zibethinus HOM05D000345 ORTHO05D000215 1.3e-09 67.4 200 33.5
Glyma.05G019900 Glycine max HOM05D000345 ORTHO05D000215 1.7e-09 67.0 180 36.7
Cpa.g.sc94.62 Carica papaya HOM05D000345 ORTHO05D000215 2.2e-09 66.6 186 36.6
Potri.017G094800 Populus trichocarpa HOM05D000345 ORTHO05D000215 2.2e-09 66.6 198 31.3
Prupe.3G252600 Prunus persica HOM05D000345 ORTHO05D000215 2.9e-09 66.2 170 36.5
Sabra04G0069800 Salix brachista HOM05D000345 ORTHO05D000215 3.8e-09 65.9 194 31.4
Lj1g0002593 Lotus japonicus HOM05D000345 ORTHO05D000215 1.1e-08 64.3 174 39.7
Nitab4.5_0007019g0020 Nicotiana tabacum HOM05D000345 ORTHO05D000215 1.9e-08 63.5 152 35.5
Ah.02g114150 Amaranthus hybridus HOM05D000345 ORTHO05D000215 1.6e-07 60.5 112 40.2
TWI81G0916 Tripterygium wilfordii HOM05D000345 ORTHO05D000215 2.7e-07 59.7 202 34.2
Atru.chr8.475 Acer truncatum HOM05D000345 ORTHO05D000215 3.5e-07 59.3 164 37.2
COL.COLO4_24334 Corchorus olitorius HOM05D000345 ORTHO05D000215 7.8e-07 58.2 134 37.3
Ah.11g047630 Amaranthus hybridus HOM05D000345 ORTHO05D000215 5.1e-06 55.5 172 33.1
ECA232G0975 Erigeron canadensis HOM05D000345 ORTHO05D000215 6.6e-06 55.1 158 32.3


User provided reference genes

Program Settings