Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9P400T40 Lonicera japonica HOM05D007970 ORTHO05D009943 3.8e-85 318.2 162 100.0
Dinv41914 Davidia involucrata HOM05D007970 ORTHO05D009943 1.6e-22 110.2 141 47.5
Rhsim11G0193700 Rhododendron simsii HOM05D007970 ORTHO05D009943 8.5e-21 104.4 106 52.8
Actinidia14361 Actinidia chinensis HOM05D007970 ORTHO05D009943 4.0e-18 95.5 100 54.0
vmacro17329 Vaccinium macrocarpon HOM05D007970 ORTHO05D009943 5.2e-18 95.1 99 53.5
Actinidia21480 Actinidia chinensis HOM05D007970 ORTHO05D009943 8.8e-18 94.4 133 45.1
Actinidia18037 Actinidia chinensis HOM05D007970 ORTHO05D009943 2.6e-17 92.8 121 47.9
Rhsim05G0052900 Rhododendron simsii HOM05D007970 ORTHO05D009943 2.2e-16 89.7 134 46.3
Hma1.2p1_0032F.1_g019140 Hydrangea macrophylla HOM05D007970 ORTHO05D009943 8.3e-16 87.8 95 54.7
CSS0030284 Camellia sinensis var. sinensis HOM05D007970 ORTHO05D009943 4.1e-15 85.5 148 40.5
Lsat_1_v5_gn_4_72040 Lactuca sativa HOM05D007970 ORTHO05D009943 1.6e-14 83.6 103 50.5
PGSC0003DMG400018628 Solanum tuberosum HOM05D007970 ORTHO05D009943 2.7e-14 82.8 96 50.0
Oeu028958.1 Olea europaea HOM05D007970 ORTHO05D009943 7.7e-14 81.3 99 48.5
Oeu015553.1 Olea europaea HOM05D007970 ORTHO05D009943 1.0e-13 80.9 85 51.8
Solyc01g111820.2 Solanum lycopersicum HOM05D007970 ORTHO05D009943 3.8e-13 79.0 90 52.2
COL.COLO4_36729 Corchorus olitorius HOM05D007970 ORTHO05D009943 1.1e-12 77.4 144 39.6
TWI31G1200 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 1.1e-12 77.4 140 36.4
CAN.G588.103 Capsicum annuum HOM05D007970 ORTHO05D009943 2.5e-12 76.3 100 43.0
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 2.5e-12 76.3 122 42.6
Migut.N01333 Erythranthe guttata HOM05D007970 ORTHO05D009943 3.2e-12 75.9 83 54.2
Peaxi162Scf00078g00137 Petunia axillaris HOM05D007970 ORTHO05D009943 7.2e-12 74.7 103 43.7
Sopen01g053860 Solanum pennellii HOM05D007970 ORTHO05D009943 1.6e-11 73.6 81 50.6
RcHm_v2.0_Chr6g0278991 Rosa chinensis HOM05D007970 ORTHO05D009943 2.7e-11 72.8 154 37.0
Dinv14128 Davidia involucrata HOM05D007970 ORTHO05D009943 3.6e-11 72.4 90 48.9
Actinidia20529 Actinidia chinensis HOM05D007970 ORTHO05D009943 6.1e-11 71.6 72 56.9
Gohir.A03G206000 Gossypium hirsutum HOM05D007970 ORTHO05D009943 8.0e-11 71.2 161 34.8
SGA_v2.0_scaffold32G13308 Striga asiatica HOM05D007970 ORTHO05D009943 8.0e-11 71.2 94 46.8
CiPaw.05G085600 Carya illinoinensis HOM05D007970 ORTHO05D009943 1.0e-10 70.9 147 38.1
SGA_v2.0_scaffold195G40813 Striga asiatica HOM05D007970 ORTHO05D009943 1.0e-10 70.9 99 45.5
Peaxi162Scf00362g00411 Petunia axillaris HOM05D007970 ORTHO05D009943 1.4e-10 70.5 88 50.0
Oeu045100.1 Olea europaea HOM05D007970 ORTHO05D009943 1.8e-10 70.1 88 44.3
Potri.004G178101 Populus trichocarpa HOM05D007970 ORTHO05D009943 3.0e-10 69.3 120 40.0
FAN27G0083 Fragaria x ananassa HOM05D007970 ORTHO05D009943 5.2e-10 68.6 114 36.8
Haze_02097 Corylus avellana HOM05D007970 ORTHO05D009943 6.8e-10 68.2 130 37.7
DCAR_022819 Daucus carota HOM05D046813 ORTHO05D009943 6.8e-10 68.2 116 37.9
DCAR_022820 Daucus carota HOM05D046813 ORTHO05D009943 6.8e-10 68.2 116 37.9
Thecc.02G055100 Theobroma cacao HOM05D007970 ORTHO05D009943 6.8e-10 68.2 146 34.2
Nitab4.5_0013642g0020 Nicotiana tabacum HOM05D007970 ORTHO05D009943 8.8e-10 67.8 88 47.7
Duzib248G1052 Durio zibethinus HOM05D007970 ORTHO05D009943 1.2e-09 67.4 150 34.0
Gorai.005G255300 Gossypium raimondii HOM05D007970 ORTHO05D009943 1.2e-09 67.4 161 34.2
Sabra04G0119900 Salix brachista HOM05D007970 ORTHO05D009943 1.2e-09 67.4 120 39.2
TAR376G1232 Trochodendron aralioides HOM05D007970 ORTHO05D009943 1.5e-09 67.0 134 38.1
FAN15G0059 Fragaria x ananassa HOM05D007970 ORTHO05D009943 2.6e-09 66.2 108 37.0
FAN20G1196 Fragaria x ananassa HOM05D007970 ORTHO05D009943 2.6e-09 66.2 108 37.0
Gohir.D02G227400 Gossypium hirsutum HOM05D007970 ORTHO05D009943 3.4e-09 65.9 161 33.5
Cfa005290 Carpinus fangiana HOM05D007970 ORTHO05D009943 4.4e-09 65.5 130 37.7
TWI75G1150 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 4.4e-09 65.5 134 33.6
Ciclev10030163m.g Citrus clementina HOM05D007970 ORTHO05D009943 5.7e-09 65.1 104 36.5
Manes.11G099100 Manihot esculenta HOM05D007970 ORTHO05D009943 5.7e-09 65.1 101 41.6
Nitab4.5_0000079g0240 Nicotiana tabacum HOM05D007970 ORTHO05D009943 7.5e-09 64.7 56 55.4
SGA_v2.0_scaffold58G20343 Striga asiatica HOM05D007970 ORTHO05D009943 1.7e-08 63.5 82 51.2
FvH4_2g15690 Fragaria vesca HOM05D007970 ORTHO05D009943 2.8e-08 62.8 83 43.4
FAN24G2575 Fragaria x ananassa HOM05D007970 ORTHO05D009943 2.8e-08 62.8 83 43.4
Gorai.012G156800 Gossypium raimondii HOM05D007970 ORTHO05D009943 3.7e-08 62.4 147 34.0
Migut.B00057 Erythranthe guttata HOM05D007970 ORTHO05D009943 6.3e-08 61.6 94 40.4
Gohir.D04G168500 Gossypium hirsutum HOM05D007970 ORTHO05D009943 6.3e-08 61.6 147 34.0
Prupe.8G169400 Prunus persica HOM05D007970 ORTHO05D009943 1.4e-07 60.5 149 32.2
Manes.04G070700 Manihot esculenta HOM05D007970 ORTHO05D009943 2.4e-07 59.7 106 36.8
Cpa.g.sc104.60 Carica papaya HOM05D006872 ORTHO05D006261 4.1e-07 58.9 82 40.2
MD10G1128300 Malus domestica HOM05D007970 ORTHO05D009943 7.0e-07 58.2 101 38.6
ClCG02G012110 Citrullus lanatus HOM05D007970 ORTHO05D009943 2.7e-06 56.2 100 38.0
TWI77G0288 Tripterygium wilfordii HOM05D006872 ORTHO05D006261 2.7e-06 56.2 102 34.3
Gohir.A04G131900 Gossypium hirsutum HOM05D007970 ORTHO05D009943 3.5e-06 55.8 145 31.7
QL11p052437 Quercus lobata HOM05D007970 ORTHO05D009943 4.5e-06 55.5 186 29.6
Nn5g30844 Nelumbo nucifera HOM05D007970 ORTHO05D006261 5.9e-06 55.1 134 32.1
MD12G1037000 Malus domestica HOM05D006872 ORTHO05D006261 7.7e-06 54.7 67 40.3


User provided reference genes

Program Settings