Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9P331T19 Lonicera japonica HOM05D000058 ORTHO05D018523 5.8e-16 86.3 39 100.0
Lj9A335T23 Lonicera japonica HOM05D000058 ORTHO05D000255 2.7e-13 77.4 37 89.2
Lj9A652G33 Lonicera japonica HOM05D000058 ORTHO05D018523 1.6e-10 68.2 35 85.7
Duzib132G1230 Durio zibethinus HOM05D000058 ORTHO05D000255 4.0e-09 63.5 39 71.8
PGR142G3267 Punica granatum HOM05D000058 ORTHO05D000255 8.9e-09 62.4 40 72.5
PGR142G2440 Punica granatum HOM05D000058 ORTHO05D000255 1.5e-08 61.6 40 70.0
Lj9A336T18 Lonicera japonica HOM05D000058 ORTHO05D013992 2.6e-08 60.8 38 76.3
Duzib132G0198 Durio zibethinus HOM05D000058 ORTHO05D000255 4.4e-08 60.1 39 69.2
Duzib132G0567 Durio zibethinus HOM05D000058 ORTHO05D000255 4.4e-08 60.1 39 69.2
CiPaw.05G019500 Carya illinoinensis HOM05D000058 ORTHO05D000255 7.6e-08 59.3 39 66.7
Haze_10278 Corylus avellana HOM05D000058 ORTHO05D000255 7.6e-08 59.3 38 71.1
Eucgr.I01043 Eucalyptus grandis HOM05D000058 ORTHO05D000255 7.6e-08 59.3 39 69.2
QL09p049724 Quercus lobata HOM05D000058 ORTHO05D000255 7.6e-08 59.3 38 71.1
QL09p049747 Quercus lobata HOM05D000058 ORTHO05D000255 7.6e-08 59.3 38 71.1
Prupe.8G147500 Prunus persica HOM05D000058 ORTHO05D000255 9.9e-08 58.9 38 71.1
Eucgr.G01198 Eucalyptus grandis HOM05D000058 ORTHO05D000255 1.3e-07 58.5 39 64.1
Cfa004684 Carpinus fangiana HOM05D000058 ORTHO05D000255 1.7e-07 58.2 38 68.4
CiPaw.05G019400 Carya illinoinensis HOM05D000058 ORTHO05D000255 1.7e-07 58.2 39 64.1
CiPaw.05G019800 Carya illinoinensis HOM05D000058 ORTHO05D000255 1.7e-07 58.2 38 68.4
CiPaw.05G019900 Carya illinoinensis HOM05D000058 ORTHO05D000255 1.7e-07 58.2 38 68.4
Haze_10276 Corylus avellana HOM05D000058 ORTHO05D000255 1.7e-07 58.2 35 80.0
Eucgr.G01194 Eucalyptus grandis HOM05D000058 ORTHO05D000255 1.7e-07 58.2 39 64.1
Eucgr.G01197 Eucalyptus grandis HOM05D000058 ORTHO05D000255 1.7e-07 58.2 39 64.1
Eucgr.G01200 Eucalyptus grandis HOM05D000058 ORTHO05D000255 1.7e-07 58.2 39 64.1
Lj9A331G28 Lonicera japonica HOM05D000058 ORTHO05D000255 1.7e-07 58.2 37 75.7
Lj9A333G24 Lonicera japonica HOM05D000058 ORTHO05D000255 1.7e-07 58.2 37 75.7
Lj9A334G23 Lonicera japonica HOM05D000058 ORTHO05D000255 1.7e-07 58.2 37 75.7
Cfa004680 Carpinus fangiana HOM05D000058 ORTHO05D000255 2.2e-07 57.8 38 68.4
Potri.001G291700 Populus trichocarpa HOM05D000058 ORTHO05D000255 2.2e-07 57.8 39 66.7
Cfa004679 Carpinus fangiana HOM05D000058 ORTHO05D000255 2.9e-07 57.4 38 68.4
Cfa004682 Carpinus fangiana HOM05D000058 ORTHO05D000255 2.9e-07 57.4 38 68.4
Eucgr.G01195 Eucalyptus grandis HOM05D000058 ORTHO05D000255 4.9e-07 56.6 39 61.5
Eucgr.I01039 Eucalyptus grandis HOM05D000058 ORTHO05D000255 6.4e-07 56.2 38 63.2
Potri.001G290900 Populus trichocarpa HOM05D000058 ORTHO05D000255 6.4e-07 56.2 39 64.1
Potri.001G291300 Populus trichocarpa HOM05D000058 ORTHO05D000255 6.4e-07 56.2 39 64.1
Potri.001G291800 Populus trichocarpa HOM05D000058 ORTHO05D000255 6.4e-07 56.2 39 64.1
arahy.Tifrunner.gnm1.ann1.KDA1VZ Arachis hypogaea HOM05D000058 ORTHO05D000255 8.4e-07 55.8 39 66.7
DCAR_029165 Daucus carota HOM05D000058 ORTHO05D000255 8.4e-07 55.8 37 64.9
arahy.Tifrunner.gnm1.ann1.8THP1T Arachis hypogaea HOM05D000058 ORTHO05D000255 1.1e-06 55.5 39 66.7
ECA234G4452 Erigeron canadensis HOM05D000058 ORTHO05D000255 1.1e-06 55.5 39 61.5
GSVIVG01037792001 Vitis vinifera HOM05D000058 ORTHO05D000255 1.1e-06 55.5 38 63.2
Lsat_1_v5_gn_5_109840 Lactuca sativa HOM05D000058 ORTHO05D000255 1.4e-06 55.1 39 61.5
Eucgr.I01033 Eucalyptus grandis HOM05D000058 ORTHO05D000255 1.9e-06 54.7 38 60.5
Eucgr.I01040 Eucalyptus grandis HOM05D000058 ORTHO05D000255 1.9e-06 54.7 38 60.5
MD05G1103100 Malus domestica HOM05D000058 ORTHO05D000255 1.9e-06 54.7 38 65.8
Prupe.8G147800 Prunus persica HOM05D000058 ORTHO05D000255 1.9e-06 54.7 34 76.5
Prupe.8G147900 Prunus persica HOM05D000058 ORTHO05D000255 1.9e-06 54.7 34 76.5
Prupe.8G148300 Prunus persica HOM05D000058 ORTHO05D000255 1.9e-06 54.7 34 76.5
PGSC0003DMG400022103 Solanum tuberosum HOM05D000058 ORTHO05D000255 1.9e-06 54.7 39 64.1
GSVIVG01037797001 Vitis vinifera HOM05D000058 ORTHO05D000255 1.9e-06 54.7 38 68.4
Ciclev10028360m.g Citrus clementina HOM05D000058 ORTHO05D000255 2.4e-06 54.3 38 65.8
PGR142G1210 Punica granatum HOM05D000058 ORTHO05D000255 2.4e-06 54.3 38 65.8
RcHm_v2.0_Chr6g0249071 Rosa chinensis HOM05D000058 ORTHO05D000255 2.4e-06 54.3 34 73.5
RcHm_v2.0_Chr6g0249111 Rosa chinensis HOM05D000058 ORTHO05D000255 2.4e-06 54.3 34 73.5
Solyc10g049210.3 Solanum lycopersicum HOM05D000058 ORTHO05D000255 2.4e-06 54.3 39 64.1
Sopen10g020280 Solanum pennellii HOM05D000058 ORTHO05D000255 2.4e-06 54.3 39 64.1
PGSC0003DMG400025682 Solanum tuberosum HOM05D000058 ORTHO05D000255 2.4e-06 54.3 39 64.1
Atru.chr5.2320 Acer truncatum HOM05D000058 ORTHO05D000255 3.2e-06 53.9 39 64.1
Aqoxy1G04008 Aquilegia oxysepala HOM05D000058 ORTHO05D000255 3.2e-06 53.9 38 63.2
DCAR_029166 Daucus carota HOM05D000058 ORTHO05D000255 3.2e-06 53.9 37 64.9
Eucgr.G01202 Eucalyptus grandis HOM05D000058 ORTHO05D000255 3.2e-06 53.9 39 61.5
Sabra16G0181900 Salix brachista HOM05D000058 ORTHO05D000255 3.2e-06 53.9 39 61.5
Solyc10g049270.2 Solanum lycopersicum HOM05D000058 ORTHO05D000255 3.2e-06 53.9 38 65.8
Sopen10g020430 Solanum pennellii HOM05D000058 ORTHO05D000255 3.2e-06 53.9 38 65.8
VMungo1383G0295 Vigna mungo HOM05D000058 ORTHO05D002699 3.2e-06 53.9 38 63.2
Dinv42243 Davidia involucrata HOM05D000058 ORTHO05D000255 4.2e-06 53.5 38 60.5
Eucgr.I01038 Eucalyptus grandis HOM05D000058 ORTHO05D000255 4.2e-06 53.5 34 67.6
MD05G1102900 Malus domestica HOM05D000058 ORTHO05D000255 4.2e-06 53.5 34 73.5
MD05G1103600 Malus domestica HOM05D000058 ORTHO05D000255 4.2e-06 53.5 34 73.5
QL11p029759 Quercus lobata HOM05D000058 ORTHO05D000255 4.2e-06 53.5 34 70.6
Ca_23184_v3 Cicer arietinum L. HOM05D000058 ORTHO05D002699 5.4e-06 53.1 38 63.2
ECA234G4643 Erigeron canadensis HOM05D000058 ORTHO05D000255 5.4e-06 53.1 39 64.1
Lj3g0022008 Lotus japonicus HOM05D000058 ORTHO05D002699 5.4e-06 53.1 38 63.2
Psat4g206760 Pisum sativum HOM05D000058 ORTHO05D002699 5.4e-06 53.1 38 65.8
arahy.Tifrunner.gnm1.ann1.1Z7E6G Arachis hypogaea HOM05D000058 ORTHO05D000255 7.1e-06 52.8 40 57.5
arahy.Tifrunner.gnm1.ann1.YTI5QC Arachis hypogaea HOM05D000058 ORTHO05D000255 7.1e-06 52.8 40 57.5
Eucgr.L01608 Eucalyptus grandis HOM05D000058 ORTHO05D000255 7.1e-06 52.8 38 60.5
Lsat_1_v5_gn_0_39321 Lactuca sativa HOM05D000058 ORTHO05D000255 7.1e-06 52.8 39 59.0
Lsat_1_v5_gn_5_62800 Lactuca sativa HOM05D000058 ORTHO05D000255 7.1e-06 52.8 39 59.0
Medtr8g011350 Medicago truncatula HOM05D000058 ORTHO05D002699 7.1e-06 52.8 38 63.2
Prupe.8G148000 Prunus persica HOM05D000058 ORTHO05D000255 7.1e-06 52.8 35 65.7
TPR.G32011 Trifolium pratense HOM05D000058 ORTHO05D002699 7.1e-06 52.8 38 65.8
ECA234G3249 Erigeron canadensis HOM05D000470 ORTHO05D000348 9.3e-06 52.4 39 64.1
Eucgr.I01041 Eucalyptus grandis HOM05D000058 ORTHO05D000255 9.3e-06 52.4 38 57.9
Eucgr.I01042 Eucalyptus grandis HOM05D000058 ORTHO05D000255 9.3e-06 52.4 38 57.9
Lsat_1_v5_gn_5_62301 Lactuca sativa HOM05D000058 ORTHO05D000255 9.3e-06 52.4 39 59.0
Lsat_1_v5_gn_5_62601 Lactuca sativa HOM05D000058 ORTHO05D000255 9.3e-06 52.4 39 59.0
Lalb_Chr06g0168501 Lupinus albus HOM05D000058 ORTHO05D002699 9.3e-06 52.4 38 60.5
MBI11_g00136_MAGBIO Magnolia biondii HOM05D000058 ORTHO05D002699 9.3e-06 52.4 37 59.5
QL11p029795 Quercus lobata HOM05D000058 ORTHO05D000255 9.3e-06 52.4 34 70.6
RcHm_v2.0_Chr6g0249021 Rosa chinensis HOM05D000058 ORTHO05D000255 9.3e-06 52.4 34 70.6


User provided reference genes

Program Settings