Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9P311T36 Lonicera japonica HOM05D000094 ORTHO05D036480 4.4e-53 211.1 109 100.0
Lj7C617T22 Lonicera japonica HOM05D000094 ORTHO05D002350 6.1e-39 164.1 108 82.4
Dinv25614 Davidia involucrata HOM05D000094 ORTHO05D002350 5.9e-26 120.9 109 62.4
CANSAT64G0131 Cannabis sativa HOM05D000094 ORTHO05D002350 6.1e-23 110.9 105 53.3
GSVIVG01032973001 Vitis vinifera HOM05D000094 ORTHO05D036480 5.7e-21 104.4 109 54.1
Ah.03g136460 Amaranthus hybridus HOM05D000094 ORTHO05D002350 1.7e-20 102.8 109 50.5
Sc07g0003830 Simmondsia chinensis HOM05D000094 ORTHO05D002350 1.7e-20 102.8 109 51.4
MBI07_g13945_MAGBIO Magnolia biondii HOM05D000094 ORTHO05D002350 5.4e-19 97.8 107 51.4
EL10Ac6g13412 Beta vulgaris HOM05D000094 ORTHO05D002350 9.2e-19 97.1 109 48.6
Cfa007145 Carpinus fangiana HOM05D000094 ORTHO05D002350 9.2e-19 97.1 107 51.4
Cc09_g04640 Coffea canephora HOM05D000094 ORTHO05D002350 9.2e-19 97.1 107 54.2
PSO478G0341 Papaver somniferum HOM05D000094 ORTHO05D002350 1.6e-18 96.3 113 46.9
DCAR_000963 Daucus carota HOM05D000094 ORTHO05D002350 2.0e-18 95.9 107 52.3
QL02p069267 Quercus lobata HOM05D000094 ORTHO05D002350 2.0e-18 95.9 107 53.3
PSO017G5155 Papaver somniferum HOM05D000094 ORTHO05D002350 3.5e-18 95.1 113 46.9
Lj3P146T19 Lonicera japonica HOM05D000094 ORTHO05D036480 7.8e-18 94.0 80 70.0
AUR62037817 Chenopodium quinoa HOM05D000094 ORTHO05D002350 3.8e-17 91.7 109 47.7
Atru.chr6.2706 Acer truncatum HOM05D000094 ORTHO05D002350 5.0e-17 91.3 107 49.5
Haze_14973 Corylus avellana HOM05D000094 ORTHO05D002350 8.6e-17 90.5 108 50.9
Glyma.16G047300 Glycine max HOM05D000094 ORTHO05D002350 1.5e-16 89.7 109 48.6
Lj1g0026696 Lotus japonicus HOM05D000094 ORTHO05D002350 4.3e-16 88.2 109 47.7
TAR371G0501 Trochodendron aralioides HOM05D000094 ORTHO05D002350 4.3e-16 88.2 108 49.1
PGR142G3059 Punica granatum HOM05D000094 ORTHO05D002350 9.5e-16 87.0 109 44.0
Phvul.001G083300 Phaseolus vulgaris HOM05D000094 ORTHO05D002350 2.1e-15 85.9 110 47.3
ATR0582G118 Amborella trichopoda HOM05D000094 ORTHO05D002350 2.8e-15 85.5 109 45.9
Oeu062521.1 Olea europaea HOM05D000094 ORTHO05D002350 3.6e-15 85.1 107 45.8
Potri.014G144600 Populus trichocarpa HOM05D000094 ORTHO05D002350 1.4e-14 83.2 109 47.7
Actinidia36246 Actinidia chinensis HOM05D000094 ORTHO05D002350 3.0e-14 82.0 109 44.0
AUR62017437 Chenopodium quinoa HOM05D000094 ORTHO05D002350 3.0e-14 82.0 109 44.0
Eucgr.I01593 Eucalyptus grandis HOM05D000094 ORTHO05D002350 3.0e-14 82.0 108 44.4
Aqoxy5G03064 Aquilegia oxysepala HOM05D000094 ORTHO05D002350 5.2e-14 81.3 106 44.3
arahy.Tifrunner.gnm1.ann1.V8JY38 Arachis hypogaea HOM05D000094 ORTHO05D002350 8.9e-14 80.5 109 44.0
arahy.Tifrunner.gnm1.ann1.15U309 Arachis hypogaea HOM05D000094 ORTHO05D002350 3.4e-13 78.6 109 43.1
vmacro18388 Vaccinium macrocarpon HOM05D000094 ORTHO05D002350 3.2e-11 72.0 119 46.2
Duzib147G1210 Durio zibethinus HOM05D000094 ORTHO05D002350 1.6e-10 69.7 109 42.2
Ciclev10014114m.g Citrus clementina HOM05D000094 ORTHO05D002350 2.7e-10 68.9 108 42.6
Gohir.D11G068300 Gossypium hirsutum HOM05D000094 ORTHO05D002350 1.0e-09 67.0 109 41.3
Gorai.007G073100 Gossypium raimondii HOM05D000094 ORTHO05D002350 1.0e-09 67.0 109 41.3
Ca_08205_v3 Cicer arietinum L. HOM05D000094 ORTHO05D002350 5.0e-09 64.7 112 42.0
Nn4g22115 Nelumbo nucifera HOM05D000094 ORTHO05D002350 6.6e-09 64.3 108 38.0
Gohir.A11G064000 Gossypium hirsutum HOM05D000094 ORTHO05D002350 1.1e-08 63.5 109 41.3
Manes.04G093900 Manihot esculenta HOM05D000094 ORTHO05D002350 1.1e-08 63.5 110 40.0
Medtr7g084220 Medicago truncatula HOM05D000094 ORTHO05D002350 4.3e-08 61.6 111 39.6
Nn3g16251 Nelumbo nucifera HOM05D000094 ORTHO05D002350 1.2e-07 60.1 112 36.6
Thecc.04G048800 Theobroma cacao HOM05D000094 ORTHO05D002350 1.2e-07 60.1 109 37.6
COL.COLO4_13387 Corchorus olitorius HOM05D000094 ORTHO05D002350 1.6e-07 59.7 108 34.3
VMungo1383G2494 Vigna mungo HOM05D000094 ORTHO05D002350 3.6e-07 58.5 110 38.2
HPP92_008242 Vanilla planifolia HOM05D000094 ORTHO05D002350 8.0e-07 57.4 112 33.9
MELO3C005099.2 Cucumis melo HOM05D000094 ORTHO05D002350 1.4e-06 56.6 108 37.0
TWI34G1424 Tripterygium wilfordii HOM05D000094 ORTHO05D002350 1.4e-06 56.6 112 35.7
CSS0011341 Camellia sinensis var. sinensis HOM05D000094 ORTHO05D002350 1.8e-06 56.2 90 40.0
CsaV3_5G024950 Cucumis sativus L. HOM05D000094 ORTHO05D002350 4.0e-06 55.1 108 36.1


User provided reference genes

Program Settings