Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9P278T15 Lonicera japonica HOM05D007813 ORTHO05D009861 1.0e-73 280.0 148 100.0
Lju470C5T0 Lonicera japonica HOM05D007813 ORTHO05D009861 7.5e-56 220.7 148 83.8
Peaxi162Scf00643g00047 Petunia axillaris HOM05D007813 ORTHO05D009861 1.1e-22 110.5 168 47.6
Nitab4.5_0000146g0130 Nicotiana tabacum HOM05D007813 ORTHO05D009861 8.6e-20 100.9 132 44.7
Nitab4.5_0006894g0030 Nicotiana tabacum HOM05D007813 ORTHO05D009861 8.6e-20 100.9 132 46.2
Nitab4.5_0008487g0020 Nicotiana tabacum HOM05D007813 ORTHO05D009861 3.3e-19 99.0 132 45.5
Nitab4.5_0003448g0030 Nicotiana tabacum HOM05D007813 ORTHO05D009861 5.6e-19 98.2 132 45.5
Nitab4.5_0004221g0010 Nicotiana tabacum HOM05D007813 ORTHO05D009861 2.8e-18 95.9 122 45.9
Cc11_g01070 Coffea canephora HOM05D007813 ORTHO05D009861 6.2e-18 94.7 167 43.7
Migut.E00672 Erythranthe guttata HOM05D007813 ORTHO05D009861 8.1e-18 94.4 130 44.6
Oeu039115.1 Olea europaea HOM05D007813 ORTHO05D009861 1.8e-17 93.2 162 42.6
Thhalv10026382m.g Eutrema salsugineum HOM05D007813 ORTHO05D009861 6.8e-17 91.3 126 47.6
Sopen01g035700 Solanum pennellii HOM05D007813 ORTHO05D009861 6.8e-17 91.3 155 41.9
MSTRG.2075 Avicennia marina HOM05D007813 ORTHO05D009861 3.4e-16 89.0 160 40.6
CARHR231780 Cardamine hirsuta HOM05D007813 ORTHO05D009861 7.5e-16 87.8 122 47.5
DCAR_023485 Daucus carota HOM05D007813 ORTHO05D009861 1.3e-15 87.0 130 46.2
Sabra07G0000100 Salix brachista HOM05D007813 ORTHO05D009861 1.3e-15 87.0 149 43.0
C01p19700 Brassica napus HOM05D007813 ORTHO05D009861 1.1e-14 84.0 125 45.6
BolC1t01897H Brassica oleracea HOM05D007813 ORTHO05D009861 1.1e-14 84.0 125 45.6
Actinidia04359 Actinidia chinensis HOM05D007813 ORTHO05D009861 1.9e-14 83.2 154 40.9
Ciclev10032850m.g Citrus clementina HOM05D007813 ORTHO05D009861 1.9e-14 83.2 141 46.1
Nitab4.5_0001077g0010 Nicotiana tabacum HOM05D007813 ORTHO05D009861 1.9e-14 83.2 132 38.6
PGSC0003DMG400031169 Solanum tuberosum HOM05D007813 ORTHO05D009861 1.9e-14 83.2 118 47.5
BraA01t01511Z Brassica rapa HOM05D007813 ORTHO05D009861 3.2e-14 82.4 125 43.2
ClCG01G008030 Citrullus lanatus HOM05D007813 ORTHO05D009861 3.2e-14 82.4 137 42.3
CsaV3_5G021820 Cucumis sativus L. HOM05D007813 ORTHO05D009861 3.2e-14 82.4 157 41.4
A01p15750 Brassica napus HOM05D007813 ORTHO05D009861 4.1e-14 82.0 126 43.7
BcaC09g50873 Brassica carinata HOM05D007813 ORTHO05D009861 1.2e-13 80.5 128 43.8
TWI53G2082 Tripterygium wilfordii HOM05D007813 ORTHO05D009861 1.2e-13 80.5 136 41.9
Duzib248G1033 Durio zibethinus HOM05D007813 ORTHO05D009861 1.6e-13 80.1 158 39.9
Sp7g22350 Schrenkiella parvula HOM05D007813 ORTHO05D009861 2.7e-13 79.3 133 41.4
AT4G24370 Arabidopsis thaliana HOM05D007813 ORTHO05D009861 3.5e-13 79.0 137 38.7
Carub.0007s1668 Capsella rubella HOM05D007813 ORTHO05D009861 3.5e-13 79.0 128 43.8
FAN17G2972 Fragaria x ananassa HOM05D007813 ORTHO05D009861 3.5e-13 79.0 125 44.8
MELO3C005074.2 Cucumis melo HOM05D007813 ORTHO05D009861 4.6e-13 78.6 165 38.8
Sc06g0009980 Simmondsia chinensis HOM05D007813 ORTHO05D009861 6.0e-13 78.2 164 39.6
FAN07G2714 Fragaria x ananassa HOM05D007813 ORTHO05D009861 1.0e-12 77.4 123 45.5
Solyc01g089857.1 Solanum lycopersicum HOM05D007813 ORTHO05D009861 1.0e-12 77.4 81 58.0
SGA_v2.0_scaffold5G02767 Striga asiatica HOM05D007813 ORTHO05D009861 1.7e-12 76.6 149 36.9
Aa31LG4G9500 Aethionema arabicum HOM05D007813 ORTHO05D009861 2.3e-12 76.3 142 43.7
Haze_17409 Corylus avellana HOM05D001339 ORTHO05D003609 2.3e-12 76.3 119 47.9
CANSAT78G1292 Cannabis sativa HOM05D007813 ORTHO05D009861 3.9e-12 75.5 161 40.4
Cpa.g.sc30.28 Carica papaya HOM05D007813 ORTHO05D009861 6.6e-12 74.7 155 38.1
COL.COLO4_33123 Corchorus olitorius HOM05D007813 ORTHO05D009861 8.6e-12 74.3 149 37.6
HanXRQChr11g0332791 Helianthus annuus HOM05D007813 ORTHO05D009861 8.6e-12 74.3 126 43.7
FvH4_4g37240 Fragaria vesca HOM05D007813 ORTHO05D009861 1.1e-11 73.9 127 42.5
RhsimUnG0102800 Rhododendron simsii HOM05D007813 ORTHO05D009861 1.1e-11 73.9 136 41.9
Thecc.02G153800 Theobroma cacao HOM05D007813 ORTHO05D009861 1.1e-11 73.9 154 36.4
AL7G28850 Arabidopsis lyrata HOM05D007813 ORTHO05D009861 1.5e-11 73.6 124 42.7
Gohir.A03G167400 Gossypium hirsutum HOM05D007813 ORTHO05D009861 1.5e-11 73.6 157 36.3
Gorai.005G213200 Gossypium raimondii HOM05D007813 ORTHO05D009861 1.9e-11 73.2 157 36.9
EL10Ac9g22652 Beta vulgaris HOM05D000001 ORTHO05D000003 2.5e-11 72.8 177 37.3
Manes.11G001000 Manihot esculenta HOM05D007813 ORTHO05D009861 2.5e-11 72.8 154 38.3
Gohir.D02G190500 Gossypium hirsutum HOM05D007813 ORTHO05D009861 5.6e-11 71.6 159 36.5
Dinv01363 Davidia involucrata HOM05D007813 ORTHO05D009861 7.3e-11 71.2 142 39.4
Sed0004061 Sechium edule HOM05D007813 ORTHO05D009861 9.5e-11 70.9 134 39.6
Atru.chr11.1262 Acer truncatum HOM05D007813 ORTHO05D009861 1.2e-10 70.5 130 39.2
MD13G1002400 Malus domestica HOM05D007813 ORTHO05D009861 2.1e-10 69.7 136 39.7
Hund21950 Selenicereus undatus HOM05D007813 ORTHO05D009861 2.8e-10 69.3 175 36.6
unitig_699.g19640 Utricularia gibba HOM05D007813 ORTHO05D009861 4.7e-10 68.6 122 40.2
Lsat_1_v5_gn_6_66140 Lactuca sativa HOM05D007813 ORTHO05D009861 1.4e-09 67.0 141 38.3
PSO675G5803 Papaver somniferum HOM05D007813 ORTHO05D009861 3.1e-09 65.9 138 41.3
Prupe.1G350000 Prunus persica HOM05D007813 ORTHO05D009861 5.2e-09 65.1 134 38.1
PSO717G0067 Papaver somniferum HOM05D007813 ORTHO05D009861 1.2e-08 63.9 126 38.1
QL01p000818 Quercus lobata HOM05D007813 ORTHO05D009861 1.5e-08 63.5 126 42.1
Aqoxy7G00887 Aquilegia oxysepala HOM05D007813 ORTHO05D009861 2.0e-08 63.2 138 37.7
RcHm_v2.0_Chr4g0447031 Rosa chinensis HOM05D007813 ORTHO05D009861 2.6e-08 62.8 130 40.0
Nn3g16575 Nelumbo nucifera HOM05D007813 ORTHO05D009861 2.2e-07 59.7 135 37.0
AUR62014985 Chenopodium quinoa HOM05D007813 ORTHO05D009861 2.9e-07 59.3 132 34.8
ECA233G3331 Erigeron canadensis HOM05D007813 ORTHO05D009861 3.8e-07 58.9 132 35.6
TAR374G1573 Trochodendron aralioides HOM05D007813 ORTHO05D009861 6.4e-07 58.2 131 35.9


User provided reference genes

Program Settings