Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9P204T39 Lonicera japonica HOM05D006770 ORTHO05D008356 2.2e-191 672.2 345 100.0
Thecc.08G061300 Theobroma cacao HOM05D006770 ORTHO05D008356 2.2e-122 443.0 341 65.1
CSS0047097 Camellia sinensis var. sinensis HOM05D006770 ORTHO05D008356 2.8e-122 442.6 354 66.1
MD00G1136800 Malus domestica HOM05D006770 ORTHO05D008356 2.4e-121 439.5 332 65.7
CiPaw.07G136700 Carya illinoinensis HOM05D006770 ORTHO05D008356 2.6e-120 436.0 320 67.8
QL02p014697 Quercus lobata HOM05D006770 ORTHO05D008356 3.8e-119 432.2 343 64.1
Prupe.5G010100 Prunus persica HOM05D006770 ORTHO05D008356 1.4e-118 430.3 323 65.6
Duzib041G0267 Durio zibethinus HOM05D006770 ORTHO05D008356 9.4e-118 427.6 321 66.0
TAR625G0814 Trochodendron aralioides HOM05D006770 ORTHO05D008356 1.2e-117 427.2 350 63.1
Haze_22817 Corylus avellana HOM05D006770 ORTHO05D008356 2.1e-117 426.4 325 65.5
Atru.chr13.120 Acer truncatum HOM05D006770 ORTHO05D008356 1.0e-116 424.1 337 66.2
Nitab4.5_0001583g0140 Nicotiana tabacum HOM05D006770 ORTHO05D008356 1.8e-116 423.3 325 63.4
Actinidia23351 Actinidia chinensis HOM05D006770 ORTHO05D008356 3.0e-116 422.5 322 68.3
COL.COLO4_36416 Corchorus olitorius HOM05D006770 ORTHO05D008356 3.9e-116 422.2 324 66.7
Potri.005G252300 Populus trichocarpa HOM05D006770 ORTHO05D008356 1.5e-115 420.2 341 62.5
Gohir.A11G329900 Gossypium hirsutum HOM05D006770 ORTHO05D008356 2.0e-115 419.9 341 63.9
Rhsim13G0054100 Rhododendron simsii HOM05D006770 ORTHO05D008356 2.0e-115 419.9 355 62.3
Oeu032124.1 Olea europaea HOM05D006770 ORTHO05D008356 3.3e-115 419.1 333 62.8
PSO675G2016 Papaver somniferum HOM05D006770 ORTHO05D008356 3.3e-115 419.1 344 61.9
PSO541G3292 Papaver somniferum HOM05D006770 ORTHO05D008356 4.4e-115 418.7 357 61.1
Nitab4.5_0001225g0180 Nicotiana tabacum HOM05D006770 ORTHO05D008356 9.7e-115 417.5 325 62.5
Glyma.07G217000 Glycine max HOM05D006770 ORTHO05D008356 1.3e-114 417.2 343 62.1
ECA246G3919 Erigeron canadensis HOM05D006770 ORTHO05D008356 1.7e-114 416.8 341 62.8
CDE04G3028 Ceratophyllum demersum HOM05D006770 ORTHO05D008356 4.8e-114 415.2 348 61.2
Gohir.D08G007000 Gossypium hirsutum HOM05D006770 ORTHO05D008356 4.8e-114 415.2 341 62.8
Gorai.006G274800 Gossypium raimondii HOM05D006770 ORTHO05D008356 4.8e-114 415.2 341 62.8
RcHm_v2.0_Chr5g0066911 Rosa chinensis HOM05D006770 ORTHO05D008356 4.8e-114 415.2 316 64.2
CAN.G79.22 Capsicum annuum HOM05D006770 ORTHO05D008356 6.3e-114 414.8 330 62.4
Cfa014101 Carpinus fangiana HOM05D006770 ORTHO05D008356 6.3e-114 414.8 315 65.7
FvH4_5g25440 Fragaria vesca HOM05D006770 ORTHO05D008356 1.1e-113 414.1 316 63.9
FAN18G3713 Fragaria x ananassa HOM05D006770 ORTHO05D008356 1.1e-113 414.1 316 63.9
Phvul.001G002700 Phaseolus vulgaris HOM05D006770 ORTHO05D008356 1.8e-113 413.3 344 61.0
Gohir.A13G000201 Gossypium hirsutum HOM05D006770 ORTHO05D008356 2.4e-113 412.9 341 62.2
Sabra05G0195800 Salix brachista HOM05D006770 ORTHO05D008356 2.4e-113 412.9 324 63.0
Gorai.007G379700 Gossypium raimondii HOM05D006770 ORTHO05D008356 4.1e-113 412.1 341 62.5
PGR031G0937 Punica granatum HOM05D006770 ORTHO05D008356 4.1e-113 412.1 324 63.3
VMungo0251G0866 Vigna mungo HOM05D006770 ORTHO05D008356 5.3e-113 411.8 342 61.4
Aqoxy6G01625 Aquilegia oxysepala HOM05D006770 ORTHO05D008356 6.9e-113 411.4 336 62.2
THA.LOC104813750 Tarenaya hassleriana HOM05D006770 ORTHO05D008356 6.9e-113 411.4 318 65.7
Gohir.D08G275542 Gossypium hirsutum HOM05D006770 ORTHO05D008356 9.1e-113 411.0 341 62.2
Gorai.004G294200 Gossypium raimondii HOM05D006770 ORTHO05D008356 9.1e-113 411.0 337 62.6
Glyma.20G013900 Glycine max HOM05D006770 ORTHO05D008356 1.2e-112 410.6 343 61.5
Nn5g30983 Nelumbo nucifera HOM05D006770 ORTHO05D008356 2.0e-112 409.8 330 63.0
CAN.G79.18 Capsicum annuum HOM05D006770 ORTHO05D008356 2.6e-112 409.5 330 61.2
SalBow7G3490 Salvia bowleyana HOM05D006770 ORTHO05D008356 2.6e-112 409.5 318 63.2
HanXRQChr06g0167391 Helianthus annuus HOM05D006770 ORTHO05D008356 5.9e-112 408.3 334 63.2
Solyc02g070010.1 Solanum lycopersicum HOM05D006770 ORTHO05D008356 7.7e-112 407.9 336 59.8
TWI79G0343 Tripterygium wilfordii HOM05D006770 ORTHO05D008356 1.0e-111 407.5 320 63.4
FAN08G2065 Fragaria x ananassa HOM05D006770 ORTHO05D008356 1.3e-111 407.1 335 60.9
Lsat_1_v5_gn_3_16821 Lactuca sativa HOM05D006770 ORTHO05D008356 1.3e-111 407.1 341 60.7
Sopen02g019170 Solanum pennellii HOM05D006770 ORTHO05D008356 2.2e-111 406.4 336 59.5
FAN13G3072 Fragaria x ananassa HOM05D006770 ORTHO05D008356 2.9e-111 406.0 335 60.3
PGSC0003DMG400021117 Solanum tuberosum HOM05D006770 ORTHO05D008356 2.9e-111 406.0 335 60.3
EL10Ac1g01921 Beta vulgaris HOM05D006770 ORTHO05D008356 6.5e-111 404.8 318 64.5
Sc02g0009170 Simmondsia chinensis HOM05D006770 ORTHO05D008356 6.5e-111 404.8 336 62.8
CsaV3_1G014370 Cucumis sativus L. HOM05D006770 ORTHO05D008356 8.5e-111 404.4 334 62.0
AUR62040821 Chenopodium quinoa HOM05D006770 ORTHO05D008356 1.9e-110 403.3 343 60.9
Manes.17G081600 Manihot esculenta HOM05D006770 ORTHO05D008356 3.2e-110 402.5 334 62.0
Lalb_Chr05g0219451 Lupinus albus HOM05D006770 ORTHO05D008356 1.2e-109 400.6 323 62.8
Medtr4g084940 Medicago truncatula HOM05D006770 ORTHO05D008356 1.6e-109 400.2 340 61.8
TPR.G35412 Trifolium pratense HOM05D006770 ORTHO05D008356 2.7e-109 399.4 341 61.9
Lj4g0024175 Lotus japonicus HOM05D006770 ORTHO05D008356 4.7e-109 398.7 342 62.9
DCAR_024417 Daucus carota HOM05D006770 ORTHO05D008356 7.9e-109 397.9 317 65.9
Dinv31957 Davidia involucrata HOM05D006770 ORTHO05D008356 7.9e-109 397.9 272 74.3
AUR62035131 Chenopodium quinoa HOM05D006770 ORTHO05D008356 1.0e-108 397.5 340 59.7
Manes.05G095800 Manihot esculenta HOM05D006770 ORTHO05D008356 1.0e-108 397.5 321 63.2
Ciclev10000935m.g Citrus clementina HOM05D006770 ORTHO05D008356 1.8e-108 396.7 335 61.2
Ca_25485_v3 Cicer arietinum L. HOM05D006770 ORTHO05D008356 2.3e-108 396.4 340 59.1
MELO3C004826.2 Cucumis melo HOM05D006770 ORTHO05D008356 6.7e-108 394.8 334 60.8
Hund01783 Selenicereus undatus HOM05D006770 ORTHO05D008356 8.8e-108 394.4 331 61.0
Cc09_g04530 Coffea canephora HOM05D006770 ORTHO05D008356 3.3e-107 392.5 324 62.7
Migut.M00215 Erythranthe guttata HOM05D006770 ORTHO05D008356 5.7e-107 391.7 336 58.6
Peaxi162Scf00670g00024 Petunia axillaris HOM05D006770 ORTHO05D008356 1.4e-105 387.1 335 62.4
AL5G10970 Arabidopsis lyrata HOM05D006770 ORTHO05D008356 2.4e-105 386.3 341 62.5
Aa31LG2G8050 Aethionema arabicum HOM05D006770 ORTHO05D008356 4.1e-105 385.6 316 60.1
Gohir.A01G231900 Gossypium hirsutum HOM05D006770 ORTHO05D008356 4.1e-105 385.6 332 60.5
Sc02g0009150 Simmondsia chinensis HOM05D006770 ORTHO05D008356 9.1e-105 384.4 337 59.9
CANSAT64G1545 Cannabis sativa HOM05D006770 ORTHO05D008356 1.2e-104 384.0 345 59.7
Psat7g128200 Pisum sativum HOM05D006770 ORTHO05D008356 2.6e-104 382.9 339 60.8
Thhalv10004104m.g Eutrema salsugineum HOM05D006770 ORTHO05D008356 1.0e-103 380.9 317 62.1
AT2G01860 Arabidopsis thaliana HOM05D006770 ORTHO05D008356 1.7e-103 380.2 316 64.9
Gorai.009G456100 Gossypium raimondii HOM05D006770 ORTHO05D008356 5.0e-103 378.6 341 58.9
Sp2g13280 Schrenkiella parvula HOM05D006770 ORTHO05D008356 8.5e-103 377.9 314 63.1
BcaC06g34103 Brassica carinata HOM05D006770 ORTHO05D008356 4.2e-102 375.6 324 61.1
C07p32660 Brassica napus HOM05D006770 ORTHO05D008356 4.2e-102 375.6 324 61.1
BolC7t43787H Brassica oleracea HOM05D006770 ORTHO05D008356 9.4e-102 374.4 324 60.5
CARHR144420 Cardamine hirsuta HOM05D006770 ORTHO05D008356 2.7e-101 372.9 319 63.3
BcaC06g31269 Brassica carinata HOM05D006770 ORTHO05D008356 1.0e-100 370.9 330 59.1
Carub.0005s0082 Capsella rubella HOM05D006770 ORTHO05D008356 1.0e-100 370.9 319 63.6
BraA06t27272Z Brassica rapa HOM05D006770 ORTHO05D008356 4.0e-100 369.0 311 63.3
A06p43970 Brassica napus HOM05D006770 ORTHO05D008356 7.5e-99 364.8 311 60.5
MD16G1284100 Malus domestica HOM05D006770 ORTHO05D008356 8.2e-98 361.3 336 57.1
Ah.00g000990 Amaranthus hybridus HOM05D006770 ORTHO05D008356 2.4e-97 359.8 346 55.5
vmacro02830 Vaccinium macrocarpon HOM05D006770 ORTHO05D008356 2.2e-95 353.2 257 67.3
Atru.chr13.118 Acer truncatum HOM05D006770 ORTHO05D008356 5.2e-92 342.0 337 56.7
HPP92_007114 Vanilla planifolia HOM05D006770 ORTHO05D008356 1.0e-87 327.8 330 53.0
ATR0807G062 Amborella trichopoda HOM05D006770 ORTHO05D008356 1.1e-86 324.3 298 56.0
SEGI_37300 Sequoiadendron giganteum HOM05D006770 ORTHO05D008356 2.8e-85 319.7 340 49.7
Zm00001eb391890 Zea mays HOM05D006770 ORTHO05D008356 2.3e-84 316.6 342 50.3
Sed0018053 Sechium edule HOM05D006770 ORTHO05D008356 3.4e-83 312.8 267 60.3
SGA_v2.0_scaffold538G52786 Striga asiatica HOM05D006770 ORTHO05D008356 2.2e-82 310.1 338 50.3
SGA_v2.0_scaffold476G52129 Striga asiatica HOM05D006770 ORTHO05D008356 2.4e-81 306.6 338 50.0
Os02g0118000 Oryza sativa ssp. japonica HOM05D006770 ORTHO05D008356 2.3e-79 300.1 331 51.1
Gohir.A06G000350 Gossypium hirsutum HOM05D006770 ORTHO05D008356 4.9e-66 255.8 197 65.5
Actinidia12910 Actinidia chinensis HOM05D006770 ORTHO05D008356 1.2e-61 241.1 280 53.2
ClCG01G012950 Citrullus lanatus HOM05D006770 ORTHO05D008356 1.1e-52 211.5 194 58.2
SEGI_07142 Sequoiadendron giganteum HOM05D006770 ORTHO05D008356 3.1e-52 209.9 320 37.5
Gohir.D11G349500 Gossypium hirsutum HOM05D006770 ORTHO05D008356 9.9e-51 204.9 142 69.7
CAN.G733.12 Capsicum annuum HOM05D006770 ORTHO05D008356 6.2e-45 185.7 205 47.8
AagrBONN_evm.TU.Sc2ySwM_117.3058 Anthoceros agrestis HOM05D006770 ORTHO05D008356 5.6e-30 136.0 243 33.3
CAN.G332.6 Capsicum annuum HOM05D006770 ORTHO05D008356 2.7e-24 117.1 106 54.7
Mapoly0166s0014 Marchantia polymorpha HOM05D006770 ORTHO05D008356 1.8e-23 114.4 234 34.6
VMungo0720G0800 Vigna mungo HOM05D006770 ORTHO05D008356 3.9e-23 113.2 136 46.3
VMungo0331G1801 Vigna mungo HOM05D002295 ORTHO05D008356 1.9e-17 94.4 69 63.8
Pp3c13_18720 Physcomitrium patens HOM05D006770 ORTHO05D008356 7.1e-17 92.4 205 29.3
Pp3c13_18722 Physcomitrium patens HOM05D006770 ORTHO05D008356 7.1e-17 92.4 205 29.3
Gohir.D02G000400 Gossypium hirsutum HOM05D006770 ORTHO05D008356 9.7e-14 82.0 101 46.5
vmacro02831 Vaccinium macrocarpon HOM05D006770 ORTHO05D008356 1.3e-10 71.6 74 59.5
Rhsim12G0158500 Rhododendron simsii HOM05D003056 ORTHO05D003422 7.4e-06 55.8 208 23.6


User provided reference genes

Program Settings