Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C80T2 Lonicera japonica HOM05D000001 ORTHO05D009286 9.4e-68 260.0 125 100.0
Dinv40288 Davidia involucrata HOM05D000001 ORTHO05D009286 2.6e-41 172.2 114 78.1
CSS0009057 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D009286 9.8e-41 170.2 114 75.4
GSVIVG01000053001 Vitis vinifera HOM05D000001 ORTHO05D009286 1.7e-40 169.5 114 74.6
Actinidia23635 Actinidia chinensis HOM05D000001 ORTHO05D009286 3.7e-40 168.3 114 74.6
TAR362G0463 Trochodendron aralioides HOM05D000001 ORTHO05D009286 1.1e-39 166.8 114 75.4
Potri.013G021000 Populus trichocarpa HOM05D000001 ORTHO05D009286 2.4e-39 165.6 114 72.8
CANSAT78G1766 Cannabis sativa HOM05D000001 ORTHO05D009286 3.1e-39 165.2 114 76.3
Atru.chr2.405 Acer truncatum HOM05D000001 ORTHO05D009286 4.1e-39 164.9 114 72.8
RcHm_v2.0_Chr3g0454761 Rosa chinensis HOM05D000001 ORTHO05D009286 4.1e-39 164.9 114 74.6
QL03p007002 Quercus lobata HOM05D000001 ORTHO05D009286 7.0e-39 164.1 113 74.3
CANSAT78G0322 Cannabis sativa HOM05D000001 ORTHO05D009286 9.1e-39 163.7 114 75.4
Gohir.A11G265100 Gossypium hirsutum HOM05D000001 ORTHO05D009286 9.1e-39 163.7 114 71.9
Gorai.007G297100 Gossypium raimondii HOM05D000001 ORTHO05D009286 9.1e-39 163.7 114 71.9
Duzib177G1137 Durio zibethinus HOM05D000001 ORTHO05D009582 1.6e-38 162.9 114 72.8
Gohir.D11G275300 Gossypium hirsutum HOM05D000001 ORTHO05D009286 1.6e-38 162.9 113 72.6
Nn1g02236 Nelumbo nucifera HOM05D000001 ORTHO05D009286 2.0e-38 162.5 114 72.8
Thecc.05G303100 Theobroma cacao HOM05D000001 ORTHO05D009286 2.0e-38 162.5 114 72.8
Manes.09G167201 Manihot esculenta HOM05D000001 ORTHO05D009286 5.9e-38 161.0 113 71.7
Sopen01g042810 Solanum pennellii HOM05D000001 ORTHO05D009286 1.0e-37 160.2 114 69.3
MELO3C004256.2 Cucumis melo HOM05D000001 ORTHO05D009286 1.7e-37 159.5 114 69.3
HanXRQChr03g0071681 Helianthus annuus HOM05D000001 ORTHO05D009286 1.7e-37 159.5 114 71.9
vmacro05020 Vaccinium macrocarpon HOM05D000001 ORTHO05D009286 2.3e-37 159.1 114 70.2
Cc02_g33430 Coffea canephora HOM05D000001 ORTHO05D009286 2.9e-37 158.7 114 70.2
Haze_04195 Corylus avellana HOM05D000001 ORTHO05D009582 2.9e-37 158.7 114 71.9
Nitab4.5_0000137g0060 Nicotiana tabacum HOM05D000001 ORTHO05D009286 3.8e-37 158.3 114 69.3
Sed0027835 Sechium edule HOM05D000001 ORTHO05D009286 3.8e-37 158.3 114 68.4
Hund07071 Selenicereus undatus HOM05D000001 ORTHO05D009286 5.0e-37 157.9 114 72.8
Lj1g0025628 Lotus japonicus HOM05D000001 ORTHO05D009286 6.5e-37 157.5 114 70.2
Nitab4.5_0003156g0050 Nicotiana tabacum HOM05D000001 ORTHO05D009286 6.5e-37 157.5 114 69.3
Sc06g0003290 Simmondsia chinensis HOM05D000001 ORTHO05D009286 6.5e-37 157.5 114 72.8
TWI12G0446 Tripterygium wilfordii HOM05D000001 ORTHO05D009286 6.5e-37 157.5 114 70.2
CsaV3_2G005310 Cucumis sativus L. HOM05D000001 ORTHO05D009286 8.6e-37 157.1 114 68.4
Ciclev10002196m.g Citrus clementina HOM05D000001 ORTHO05D009286 1.1e-36 156.8 114 68.4
Glyma.03G237900 Glycine max HOM05D000001 ORTHO05D009286 1.1e-36 156.8 114 70.2
Solyc01g099260.3 Solanum lycopersicum HOM05D000001 ORTHO05D009286 1.1e-36 156.8 114 68.4
PGSC0003DMG400024697 Solanum tuberosum HOM05D000001 ORTHO05D009286 1.1e-36 156.8 114 68.4
CiPaw.07G017900 Carya illinoinensis HOM05D000001 ORTHO05D009286 1.5e-36 156.4 114 70.2
FAN06G3148 Fragaria x ananassa HOM05D000001 ORTHO05D009286 1.5e-36 156.4 114 71.1
Medtr7g113530 Medicago truncatula HOM05D000001 ORTHO05D009286 1.5e-36 156.4 114 71.1
RhsimUnG0226000 Rhododendron simsii HOM05D000001 ORTHO05D009286 1.5e-36 156.4 114 69.3
SalBow8G4411 Salvia bowleyana HOM05D000001 ORTHO05D009286 1.9e-36 156.0 114 68.4
FvH4_7g03590 Fragaria vesca HOM05D000001 ORTHO05D009286 2.5e-36 155.6 114 71.1
MD12G1219200 Malus domestica HOM05D000001 ORTHO05D009286 3.3e-36 155.2 114 71.1
CAN.G1034.26 Capsicum annuum HOM05D000001 ORTHO05D009286 4.2e-36 154.8 114 67.5
Eucgr.B01873 Eucalyptus grandis HOM05D000001 ORTHO05D009286 4.2e-36 154.8 114 68.4
EL10Ac6g14022 Beta vulgaris HOM05D000001 ORTHO05D009286 5.5e-36 154.5 114 71.1
ClCG02G015790 Citrullus lanatus HOM05D000001 ORTHO05D009286 7.2e-36 154.1 114 67.5
Peaxi162Scf00037g00631 Petunia axillaris HOM05D000001 ORTHO05D009286 1.2e-35 153.3 114 69.3
arahy.Tifrunner.gnm1.ann1.N2G7N8 Arachis hypogaea HOM05D000001 ORTHO05D009286 1.6e-35 152.9 114 67.5
Prupe.6G325800 Prunus persica HOM05D000001 ORTHO05D009286 2.1e-35 152.5 114 70.2
arahy.Tifrunner.gnm1.ann1.LJ09F6 Arachis hypogaea HOM05D000001 ORTHO05D009286 4.7e-35 151.4 114 66.7
ECA240G0839 Erigeron canadensis HOM05D000001 ORTHO05D009286 1.4e-34 149.8 111 70.3
Eucgr.B01968 Eucalyptus grandis HOM05D000001 ORTHO05D009286 1.4e-34 149.8 114 66.7
VMungo0540G1561 Vigna mungo HOM05D000001 ORTHO05D009286 1.8e-34 149.4 114 66.7
Ca_09356_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009286 4.0e-34 148.3 114 66.7
Lalb_Chr18g0045641 Lupinus albus HOM05D000001 ORTHO05D009286 4.0e-34 148.3 114 66.7
Phvul.006G091900 Phaseolus vulgaris HOM05D000001 ORTHO05D009286 4.0e-34 148.3 114 66.7
DCAR_024833 Daucus carota HOM05D000001 ORTHO05D009286 5.2e-34 147.9 114 67.5
Lsat_1_v5_gn_9_123500 Lactuca sativa HOM05D000001 ORTHO05D009286 5.2e-34 147.9 108 70.4
MSTRG.16965 Avicennia marina HOM05D000001 ORTHO05D009286 8.9e-34 147.1 114 67.5
ATR0030G028 Amborella trichopoda HOM05D000001 ORTHO05D009286 4.4e-33 144.8 113 64.6
Oeu017485.1 Olea europaea HOM05D000001 ORTHO05D009286 5.7e-33 144.4 96 75.0
Psat3g010960 Pisum sativum HOM05D000001 ORTHO05D009286 7.5e-33 144.1 114 65.8
MBI17_g31750_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009286 9.8e-33 143.7 113 66.4
AUR62014152 Chenopodium quinoa HOM05D000001 ORTHO05D009286 2.2e-32 142.5 116 66.4
Aqoxy2G03342 Aquilegia oxysepala HOM05D000001 ORTHO05D009286 2.4e-31 139.0 113 62.8
Carub.0003s0462 Capsella rubella HOM05D000001 ORTHO05D009286 2.0e-30 136.0 114 60.5
THA.LOC104821713 Tarenaya hassleriana HOM05D000001 ORTHO05D009286 2.0e-30 136.0 115 63.5
Migut.B01034 Erythranthe guttata HOM05D000001 ORTHO05D009286 4.5e-30 134.8 97 69.1
TPR.G18990 Trifolium pratense HOM05D000001 ORTHO05D009286 5.9e-30 134.4 104 69.2
AT3G05345 Arabidopsis thaliana HOM05D000001 ORTHO05D009286 2.9e-29 132.1 112 61.6
CARHR079690 Cardamine hirsuta HOM05D000001 ORTHO05D009286 3.8e-29 131.7 112 61.6
COL.COLO4_13469 Corchorus olitorius HOM05D000001 ORTHO05D009286 5.0e-29 131.3 96 68.8
Sp3g04210 Schrenkiella parvula HOM05D000001 ORTHO05D009286 8.6e-29 130.6 112 59.8
BNapus_Darmor_BZH_scaffold_114p00160 Brassica napus HOM05D000001 ORTHO05D009286 2.5e-28 129.0 112 60.7
BraSC132t45509Z Brassica rapa HOM05D000001 ORTHO05D009286 2.5e-28 129.0 112 60.7
Sabra13G0023400 Salix brachista HOM05D000001 ORTHO05D009286 2.5e-28 129.0 88 73.9
CDE05G2030 Ceratophyllum demersum HOM05D000001 ORTHO05D009286 7.3e-28 127.5 114 59.6
AL3G15790 Arabidopsis lyrata HOM05D000001 ORTHO05D009286 2.8e-27 125.6 112 58.9
BcaC05g30155 Brassica carinata HOM05D000001 ORTHO05D009286 6.1e-27 124.4 112 58.0
unitig_747.g21349 Utricularia gibba HOM05D000001 ORTHO05D009286 6.1e-27 124.4 102 60.8
HPP92_013683 Vanilla planifolia HOM05D000001 ORTHO05D009286 6.1e-27 124.4 110 57.3
Mapoly0074s0078 Marchantia polymorpha HOM05D000001 ORTHO05D009286 1.2e-25 120.2 113 54.9
Zm00001eb287490 Zea mays HOM05D000001 ORTHO05D009286 1.2e-25 120.2 112 56.2
SGA_v2.0_scaffold172G38993 Striga asiatica HOM05D000001 ORTHO05D009286 1.5e-25 119.8 112 59.8
AagrBONN_evm.TU.Sc2ySwM_344.2674 Anthoceros agrestis HOM05D000001 ORTHO05D009286 3.4e-25 118.6 114 52.6
Eucgr.B01971 Eucalyptus grandis HOM05D000001 ORTHO05D009286 3.4e-25 118.6 99 65.7
PSO170G4485 Papaver somniferum HOM05D000001 ORTHO05D009286 5.8e-25 117.9 101 59.4
Cfa006590 Carpinus fangiana HOM05D000001 ORTHO05D009582 1.7e-24 116.3 66 83.3
FAN03G0753 Fragaria x ananassa HOM05D000001 ORTHO05D009286 6.4e-24 114.4 85 68.2
PSO302G0274 Papaver somniferum HOM05D000001 ORTHO05D009286 6.4e-24 114.4 101 58.4
Pp3c27_1510 Physcomitrium patens HOM05D000001 ORTHO05D009286 4.1e-23 111.7 116 53.4
PGR083G0578 Punica granatum HOM05D000001 ORTHO05D009286 7.8e-22 107.5 86 66.3
SMO367G0812 Selaginella moellendorffii HOM05D000001 ORTHO05D009286 7.8e-22 107.5 113 49.6
AUR62038496 Chenopodium quinoa HOM05D000001 ORTHO05D009286 8.6e-21 104.0 66 77.3
Aa31LG5G15720 Aethionema arabicum HOM05D000141 ORTHO05D001311 1.1e-20 103.6 107 53.3
CBR_g31147 Chara braunii HOM05D000001 ORTHO05D009286 1.4e-15 86.7 114 44.7
Lsat_1_v5_gn_5_155340 Lactuca sativa HOM05D001365 ORTHO05D009286 1.5e-09 66.6 47 66.0
MCO07G492 Micromonas commoda HOM05D000001 ORTHO05D009286 7.1e-07 57.8 133 33.1
AagrBONN_evm.TU.Sc2ySwM_117.1640 Anthoceros agrestis HOM05D005546 ORTHO05D006458 6.0e-06 54.7 65 43.1


User provided reference genes

Program Settings