Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C717G7 Lonicera japonica HOM05D005809 ORTHO05D007259 2.0e-95 352.4 179 100.0
Actinidia04301 Actinidia chinensis HOM05D005809 ORTHO05D007259 5.8e-63 244.6 189 68.3
Dinv41380 Davidia involucrata HOM05D005809 ORTHO05D007259 6.7e-59 231.1 224 59.4
Dinv43244 Davidia involucrata HOM05D005809 ORTHO05D007259 8.7e-59 230.7 224 58.5
CSS0045900 Camellia sinensis var. sinensis HOM05D005809 ORTHO05D007259 4.3e-58 228.4 223 57.0
QL02p093215 Quercus lobata HOM05D005809 ORTHO05D007259 2.0e-55 219.5 226 54.9
Migut.J01341 Erythranthe guttata HOM05D005809 ORTHO05D007259 2.6e-55 219.2 217 57.1
MSTRG.19648 Avicennia marina HOM05D005809 ORTHO05D007259 4.5e-55 218.4 217 56.2
HanXRQChr17g0552351 Helianthus annuus HOM05D005809 ORTHO05D007259 1.0e-54 217.2 206 58.7
GSVIVG01023603001 Vitis vinifera HOM05D005809 ORTHO05D007259 8.4e-54 214.2 224 53.1
Lsat_1_v5_gn_8_63301 Lactuca sativa HOM05D005809 ORTHO05D007259 1.9e-53 213.0 229 52.4
MD02G1007700 Malus domestica HOM05D005809 ORTHO05D007259 3.2e-53 212.2 218 55.0
ECA247G0266 Erigeron canadensis HOM05D005809 ORTHO05D007259 5.5e-53 211.5 212 56.1
CiPaw.15G168900 Carya illinoinensis HOM05D005809 ORTHO05D007259 1.6e-52 209.9 224 52.2
Gohir.D05G056000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 1.6e-52 209.9 218 53.7
Nn8g39891 Nelumbo nucifera HOM05D005809 ORTHO05D007259 2.1e-52 209.5 219 53.4
Hma1.2p1_0222F.1_g093550 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 2.7e-52 209.1 224 54.9
Gorai.009G057000 Gossypium raimondii HOM05D005809 ORTHO05D007259 6.1e-52 208.0 218 53.2
Duzib187G1947 Durio zibethinus HOM05D005809 ORTHO05D007259 7.9e-52 207.6 218 54.1
FvH4_1g00940 Fragaria vesca HOM05D005809 ORTHO05D007259 7.9e-52 207.6 214 54.2
Solyc07g005640.3 Solanum lycopersicum HOM05D005809 ORTHO05D007259 7.9e-52 207.6 218 53.7
Glyma.06G219200 Glycine max HOM05D005809 ORTHO05D007259 1.0e-51 207.2 225 51.1
Prupe.7G262800 Prunus persica HOM05D005809 ORTHO05D007259 1.3e-51 206.8 218 54.1
FAN23G2666 Fragaria x ananassa HOM05D005809 ORTHO05D007259 2.3e-51 206.1 218 55.5
RcHm_v2.0_Chr2g0085671 Rosa chinensis HOM05D005809 ORTHO05D007259 2.3e-51 206.1 218 55.0
Sopen07g001740 Solanum pennellii HOM05D005809 ORTHO05D007259 2.3e-51 206.1 218 52.8
SalBow1G5910 Salvia bowleyana HOM05D005809 ORTHO05D007259 3.0e-51 205.7 212 54.7
Phvul.009G195100 Phaseolus vulgaris HOM05D005809 ORTHO05D007259 5.1e-51 204.9 216 50.9
THA.LOC104817821 Tarenaya hassleriana HOM05D005809 ORTHO05D007259 5.1e-51 204.9 217 58.1
Thecc.09G030800 Theobroma cacao HOM05D005809 ORTHO05D007259 5.1e-51 204.9 221 52.5
Carub.0008s1848 Capsella rubella HOM05D005809 ORTHO05D007259 6.7e-51 204.5 220 55.5
COL.COLO4_18808 Corchorus olitorius HOM05D005809 ORTHO05D007259 8.7e-51 204.1 221 51.1
TAR636G3217 Trochodendron aralioides HOM05D005809 ORTHO05D007259 8.7e-51 204.1 225 52.0
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 1.1e-50 203.8 209 54.1
Psat1g021800 Pisum sativum HOM05D005809 ORTHO05D007259 1.9e-50 203.0 213 51.6
CARHR271730 Cardamine hirsuta HOM05D005809 ORTHO05D007259 2.5e-50 202.6 220 55.0
AL8G34030 Arabidopsis lyrata HOM05D005809 ORTHO05D007259 3.3e-50 202.2 220 54.5
Sp6g19620 Schrenkiella parvula HOM05D005809 ORTHO05D007259 3.3e-50 202.2 220 54.5
Eucgr.C02542 Eucalyptus grandis HOM05D005809 ORTHO05D007259 4.3e-50 201.8 224 50.9
Sabra06G0140200 Salix brachista HOM05D005809 ORTHO05D007259 4.3e-50 201.8 229 51.1
Potri.006G184600 Populus trichocarpa HOM05D005809 ORTHO05D007259 5.7e-50 201.4 210 54.8
Atru.chr7.51 Acer truncatum HOM05D005809 ORTHO05D007259 7.4e-50 201.1 225 50.2
BraA10t43609Z Brassica rapa HOM05D005809 ORTHO05D007259 7.4e-50 201.1 217 54.8
arahy.Tifrunner.gnm1.ann1.46B1EJ Arachis hypogaea HOM05D005809 ORTHO05D007259 1.3e-49 200.3 225 49.3
Eucgr.C02492 Eucalyptus grandis HOM05D005809 ORTHO05D007259 1.3e-49 200.3 224 50.9
Glyma.06G219400 Glycine max HOM05D005809 ORTHO05D007259 1.6e-49 199.9 216 50.9
Ah.02g128190 Amaranthus hybridus HOM05D005809 ORTHO05D007259 2.2e-49 199.5 202 55.9
Aqoxy2G02328 Aquilegia oxysepala HOM05D005809 ORTHO05D007259 2.2e-49 199.5 208 53.8
AT5G57950 Arabidopsis thaliana HOM05D005809 ORTHO05D007259 2.2e-49 199.5 221 53.8
PGSC0003DMG401011139 Solanum tuberosum HOM05D005809 ORTHO05D007259 2.8e-49 199.1 223 51.6
Thhalv10014592m.g Eutrema salsugineum HOM05D005809 ORTHO05D007259 3.7e-49 198.7 222 53.2
TWI34G1090 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 3.7e-49 198.7 226 49.6
CsaV3_2G007490 Cucumis sativus L. HOM05D005809 ORTHO05D007259 4.8e-49 198.4 223 50.7
A10p16200 Brassica napus HOM05D005809 ORTHO05D007259 6.3e-49 198.0 215 55.3
C09p49790 Brassica napus HOM05D005809 ORTHO05D007259 6.3e-49 198.0 211 56.4
MELO3C004136.2 Cucumis melo HOM05D005809 ORTHO05D007259 6.3e-49 198.0 223 50.2
BolC9t57830H Brassica oleracea HOM05D005809 ORTHO05D007259 1.1e-48 197.2 211 55.9
CAN.G160.58 Capsicum annuum HOM05D005809 ORTHO05D007259 1.4e-48 196.8 228 50.9
Rhsim01G0033400 Rhododendron simsii HOM05D005809 ORTHO05D007259 1.4e-48 196.8 226 51.8
vmacro16802 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 1.4e-48 196.8 283 44.9
CANSAT11G2656 Cannabis sativa HOM05D005809 ORTHO05D007259 2.4e-48 196.1 219 52.1
Ca_03733_v3 Cicer arietinum L. HOM05D005809 ORTHO05D007259 2.4e-48 196.1 226 48.2
Haze_19206 Corylus avellana HOM05D005809 ORTHO05D007259 2.4e-48 196.1 209 56.9
Lj6g0016819 Lotus japonicus HOM05D005809 ORTHO05D007259 2.4e-48 196.1 222 49.5
Manes.06G033951 Manihot esculenta HOM05D005809 ORTHO05D007259 2.4e-48 196.1 224 51.3
Duzib168G0271 Durio zibethinus HOM05D005809 ORTHO05D007259 3.1e-48 195.7 218 51.8
Lalb_Chr23g0275681 Lupinus albus HOM05D005809 ORTHO05D007259 3.1e-48 195.7 224 47.8
Sed0001225 Sechium edule HOM05D005809 ORTHO05D007259 4.1e-48 195.3 223 49.8
Hund01517 Selenicereus undatus HOM05D005809 ORTHO05D007259 5.3e-48 194.9 181 57.5
Ciclev10009378m.g Citrus clementina HOM05D005809 ORTHO05D007259 6.9e-48 194.5 224 49.6
DCAR_017909 Daucus carota HOM05D005809 ORTHO05D007259 9.0e-48 194.1 247 49.8
Oeu052197.1 Olea europaea HOM05D005809 ORTHO05D007259 9.0e-48 194.1 219 53.9
PGR102G1797 Punica granatum HOM05D005809 ORTHO05D007259 9.0e-48 194.1 220 50.5
Medtr2g460780 Medicago truncatula HOM05D005809 ORTHO05D007259 2.0e-47 193.0 221 49.3
arahy.Tifrunner.gnm1.ann1.Z5GGTZ Arachis hypogaea HOM05D005809 ORTHO05D007259 3.4e-47 192.2 224 48.2
Cpa.g.sc46.154 Carica papaya HOM05D005809 ORTHO05D007259 5.9e-47 191.4 222 50.9
SGA_v2.0_scaffold265G46107 Striga asiatica HOM05D005809 ORTHO05D007259 7.7e-47 191.0 211 51.2
TWI32G0918 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 7.7e-47 191.0 226 48.7
TPR.G20735 Trifolium pratense HOM05D005809 ORTHO05D007259 1.0e-46 190.7 223 49.3
AUR62035200 Chenopodium quinoa HOM05D005809 ORTHO05D007259 1.7e-46 189.9 180 57.8
Nitab4.5_0005653g0040 Nicotiana tabacum HOM05D005809 ORTHO05D007259 2.9e-46 189.1 201 54.7
PSO782G1751 Papaver somniferum HOM05D005809 ORTHO05D007259 2.9e-46 189.1 208 51.0
Aa31LG3G13770 Aethionema arabicum HOM05D000853 ORTHO05D000723 3.8e-46 188.7 223 50.7
Peaxi162Scf00401g00082 Petunia axillaris HOM05D005809 ORTHO05D007259 1.9e-45 186.4 216 48.6
Nitab4.5_0001571g0010 Nicotiana tabacum HOM05D005809 ORTHO05D007259 3.2e-45 185.7 214 51.4
Gohir.A05G055000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 2.1e-44 183.0 211 49.3
PSO063G2086 Papaver somniferum HOM05D005809 ORTHO05D007259 3.6e-44 182.2 208 49.5
Sc08g0005640 Simmondsia chinensis HOM05D005809 ORTHO05D007259 7.9e-44 181.0 217 49.8
ATR0739G206 Amborella trichopoda HOM05D005809 ORTHO05D007259 1.1e-42 177.2 228 45.2
HPP92_016019 Vanilla planifolia HOM05D005809 ORTHO05D007259 2.0e-42 176.4 209 47.8
SEGI_31268 Sequoiadendron giganteum HOM05D005809 ORTHO05D007259 2.2e-41 172.9 224 46.9
ClCG02G014530 Citrullus lanatus HOM05D005809 ORTHO05D007259 5.3e-40 168.3 211 47.4
Os09g0420600 Oryza sativa ssp. japonica HOM05D005809 ORTHO05D007259 6.9e-40 167.9 209 46.4
CDE12G0564 Ceratophyllum demersum HOM05D005809 ORTHO05D007259 9.1e-40 167.5 224 45.5
Zm00001eb312980 Zea mays HOM05D005809 ORTHO05D007259 1.5e-39 166.8 207 44.9
Dinv42856 Davidia involucrata HOM05D005809 ORTHO05D007259 5.0e-38 161.8 113 71.7
AagrBONN_evm.TU.Sc2ySwM_117.3948 Anthoceros agrestis HOM05D005809 ORTHO05D007259 8.5e-38 161.0 226 42.5
HPP92_016035 Vanilla planifolia HOM05D005809 ORTHO05D007259 1.1e-37 160.6 190 47.9
vmacro05441 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 1.2e-36 157.1 190 47.4
FAN28G0834 Fragaria x ananassa HOM05D005809 ORTHO05D007259 2.7e-36 156.0 222 44.6
Pp3c8_2960 Physcomitrium patens HOM05D005809 ORTHO05D007259 3.9e-35 152.1 226 40.7
Mapoly0003s0072 Marchantia polymorpha HOM05D005809 ORTHO05D007259 6.7e-35 151.4 229 41.0
SMO361G0343 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 2.2e-33 146.4 220 41.8
SMO361G0248 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 2.8e-33 146.0 220 41.8
Pp3c16_13530 Physcomitrium patens HOM05D005809 ORTHO05D007259 4.8e-33 145.2 214 40.2
Actinidia38322 Actinidia chinensis HOM05D005809 ORTHO05D007259 1.2e-31 140.6 164 52.4
FAN21G3780 Fragaria x ananassa HOM05D005809 ORTHO05D007259 2.6e-31 139.4 150 55.3
Cc06_g14990 Coffea canephora HOM05D005809 ORTHO05D007259 4.5e-31 138.7 90 72.2
Hma1.2p1_0010F.1_g006710 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 2.2e-30 136.3 112 61.6
SHI02853 Sapria himalayana HOM05D005809 ORTHO05D007259 1.8e-27 126.7 204 41.2
EL10As1g23143 Beta vulgaris HOM05D005809 ORTHO05D007259 3.0e-27 125.9 114 57.9
Aa31LG1G19310 Aethionema arabicum HOM05D005809 ORTHO05D007259 8.8e-27 124.4 88 69.3
RcHm_v2.0_Chr5g0031291 Rosa chinensis HOM05D005809 ORTHO05D007259 4.8e-25 118.6 115 56.5
FAN25G0559 Fragaria x ananassa HOM05D005809 ORTHO05D007259 3.5e-23 112.5 135 48.9
FvH4_3g18530 Fragaria vesca HOM05D005809 ORTHO05D007259 1.7e-22 110.2 124 53.2
FAN11G2737 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.7e-22 110.2 124 53.2
CBR_g38078 Chara braunii HOM05D000019 ORTHO05D000048 1.6e-20 103.6 261 29.5
Sed0002126 Sechium edule HOM05D005809 ORTHO05D007259 3.6e-20 102.4 161 41.0
Hma1.2p1_0222F.1_g093570 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 8.8e-19 97.8 107 53.3
MCO13G469 Micromonas commoda HOM05D005809 ORTHO05D007259 7.5e-18 94.7 199 34.7
Oeu007777.1 Olea europaea HOM05D005809 ORTHO05D007259 4.8e-17 92.0 89 51.7
Oeu049715.1 Olea europaea HOM05D005809 ORTHO05D007259 4.8e-17 92.0 89 50.6
Oeu038698.1 Olea europaea HOM05D005809 ORTHO05D007259 1.4e-16 90.5 89 50.6
EL10As1g23140 Beta vulgaris HOM05D005809 ORTHO05D007259 4.1e-16 89.0 68 69.1
Cc06_g14980 Coffea canephora HOM05D005809 ORTHO05D007259 2.7e-15 86.3 66 68.2
Oeu017561.1 Olea europaea HOM05D005809 ORTHO05D007259 3.5e-15 85.9 89 48.3
Cre04.g226950 Chlamydomonas reinhardtii HOM05D005809 ORTHO05D007259 5.0e-14 82.0 267 27.3
CSS0015204 Camellia sinensis var. sinensis HOM05D000853 ORTHO05D000723 1.1e-13 80.9 61 63.9
FAN26G2229 Fragaria x ananassa HOM05D005809 ORTHO05D007259 2.5e-13 79.7 57 64.9
vmacro11582 Vaccinium macrocarpon HOM05D005809 ORTHO05D010075 8.0e-12 74.7 54 66.7
Oeu029241.1 Olea europaea HOM05D005809 ORTHO05D007259 2.0e-10 70.1 77 44.2
PRCOL_00000214 Prasinoderma coloniale HOM05D005809 ORTHO05D007259 2.0e-07 60.1 94 36.2
MD09G1175000 Malus domestica HOM05D005809 ORTHO05D007259 4.5e-07 58.9 54 63.0


User provided reference genes

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