Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C692T4 Lonicera japonica HOM05D001538 ORTHO05D000007 0.0e+00 1169.5 584 100.0
Lj8C741G12 Lonicera japonica HOM05D001538 ORTHO05D000007 6.6e-172 608.2 454 74.4
Lj8A740G21 Lonicera japonica HOM05D001538 ORTHO05D000007 4.0e-129 466.1 466 60.1
Lj8C744T6 Lonicera japonica HOM05D001538 ORTHO05D000007 1.3e-108 397.9 360 60.8
Lj9C691T2 Lonicera japonica HOM05D001538 ORTHO05D000007 2.9e-63 247.3 539 37.8
Lju2422A0T21 Lonicera japonica HOM05D001538 ORTHO05D000007 1.5e-62 245.0 517 36.0
Lj9A692G58 Lonicera japonica HOM05D001538 ORTHO05D000007 1.1e-57 228.8 139 86.3
Lj8C740T16 Lonicera japonica HOM05D001538 ORTHO05D000007 1.0e-44 185.7 465 34.6
Lj2C4G6 Lonicera japonica HOM05D001538 ORTHO05D000007 3.4e-43 180.6 464 32.3
Lj8C741T17 Lonicera japonica HOM05D001538 ORTHO05D000007 6.6e-31 139.8 474 29.3
Lj9C692G13 Lonicera japonica HOM05D001538 ORTHO05D000007 3.3e-30 137.5 235 35.3
Lju521P0T33 Lonicera japonica HOM05D012945 ORTHO05D000007 3.6e-29 134.0 86 74.4
Lj2A1219T41 Lonicera japonica HOM05D001538 ORTHO05D000007 1.1e-28 132.5 100 63.0
Lj2A1219T39 Lonicera japonica HOM05D001538 ORTHO05D000007 5.8e-27 126.7 473 26.6
Lj8C740T13 Lonicera japonica HOM05D001538 ORTHO05D000007 3.7e-26 124.0 287 35.2
Lj7P482T20 Lonicera japonica HOM05D001538 ORTHO05D000007 9.2e-25 119.4 249 30.5
Lju3638C0T0 Lonicera japonica HOM05D001538 ORTHO05D000007 1.9e-22 111.7 297 33.3
Lj4A923G18 Lonicera japonica HOM05D004198 ORTHO05D006470 5.6e-22 110.2 93 60.2
Lj4A924T29 Lonicera japonica HOM05D001538 ORTHO05D000007 2.1e-21 108.2 525 26.1
Lj4A836T53 Lonicera japonica HOM05D001538 ORTHO05D000007 5.2e-20 103.6 167 36.5
Lju2422C0T10 Lonicera japonica HOM05D001538 ORTHO05D000007 1.2e-19 102.4 92 52.2
Lju1953C0G19 Lonicera japonica HOM05D001538 ORTHO05D000007 4.4e-19 100.5 92 51.1
Lj5A648T14 Lonicera japonica HOM05D010180 ORTHO05D000007 7.6e-19 99.8 122 42.6
TPR.G15063 Trifolium pratense HOM05D001538 ORTHO05D000007 9.9e-19 99.4 214 33.2
Lj2C23T8 Lonicera japonica HOM05D012945 ORTHO05D000007 1.7e-18 98.6 154 35.1
Lju2566C0T15 Lonicera japonica HOM05D012945 ORTHO05D000007 2.2e-18 98.2 90 47.8
Lj2C1218T15 Lonicera japonica HOM05D001538 ORTHO05D000007 4.9e-18 97.1 92 48.9
TPR.G19027 Trifolium pratense HOM05D001538 ORTHO05D000007 5.4e-17 93.6 269 29.0
Lj9C305T8 Lonicera japonica HOM05D001538 ORTHO05D000007 7.1e-17 93.2 270 22.6
Lj8P741T38 Lonicera japonica HOM05D002145 ORTHO05D000007 1.6e-16 92.0 166 37.3
Lj9A98T13 Lonicera japonica HOM05D010180 ORTHO05D000007 2.1e-16 91.7 122 41.0
TPR.G33855 Trifolium pratense HOM05D001538 ORTHO05D000007 2.1e-16 91.7 228 30.7
FvH4_4g08213 Fragaria vesca HOM05D001538 ORTHO05D000007 2.7e-16 91.3 275 25.8
Phvul.001G160900 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 6.0e-16 90.1 204 31.4
Lj2A1036G45 Lonicera japonica HOM05D001538 ORTHO05D000007 1.0e-15 89.4 90 46.7
RcHm_v2.0_Chr3g0453631 Rosa chinensis HOM05D001538 ORTHO05D000007 1.3e-15 89.0 268 26.5
TPR.G39433 Trifolium pratense HOM05D001538 ORTHO05D000007 1.7e-15 88.6 278 25.2
Phvul.001G068900 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 2.3e-15 88.2 190 30.5
Lj2A1218G28 Lonicera japonica HOM05D012945 ORTHO05D000007 3.0e-15 87.8 79 53.2
Lj8P741T37 Lonicera japonica HOM05D001538 ORTHO05D000007 5.1e-15 87.0 159 36.5
TPR.G27280 Trifolium pratense HOM05D001538 ORTHO05D000007 6.6e-15 86.7 242 25.6
Lj4A815T24 Lonicera japonica HOM05D012945 ORTHO05D000007 1.5e-14 85.5 170 30.6
Lj9P687T30 Lonicera japonica HOM05D012945 ORTHO05D000007 1.5e-14 85.5 142 35.9
TPR.G21617 Trifolium pratense HOM05D001538 ORTHO05D000007 1.9e-14 85.1 197 26.4
Medtr0098s0100 Medicago truncatula HOM05D001538 ORTHO05D000007 2.5e-14 84.7 221 29.9
Medtr5g034920 Medicago truncatula HOM05D001538 ORTHO05D000007 2.5e-14 84.7 209 28.2
FvH4_2g26101 Fragaria vesca HOM05D001538 ORTHO05D000007 3.3e-14 84.3 241 27.8
Lj2A887T25 Lonicera japonica HOM05D001538 ORTHO05D000007 5.6e-14 83.6 90 41.1
TPR.G16012 Trifolium pratense HOM05D001538 ORTHO05D000007 7.3e-14 83.2 214 26.6
TPR.G13832 Trifolium pratense HOM05D001538 ORTHO05D000007 9.6e-14 82.8 335 25.7
TPR.G20035 Trifolium pratense HOM05D001538 ORTHO05D000007 9.6e-14 82.8 177 27.7
Medtr0488s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 1.3e-13 82.4 235 29.8
Lj5C610T14 Lonicera japonica HOM05D001538 ORTHO05D007090 1.6e-13 82.0 421 27.1
Medtr2g036980 Medicago truncatula HOM05D001538 ORTHO05D000007 1.6e-13 82.0 188 28.2
Lj1P271T5 Lonicera japonica HOM05D012945 ORTHO05D000007 2.8e-13 81.3 80 48.8
Aqoxy1G03637 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.2e-13 80.1 219 29.2
Psat4g039840 Pisum sativum HOM05D001538 ORTHO05D000007 8.1e-13 79.7 221 32.6
FvH4_7g19511 Fragaria vesca HOM05D001538 ORTHO05D000007 1.4e-12 79.0 261 24.1
Lj2C91G13 Lonicera japonica HOM05D001538 ORTHO05D000007 1.4e-12 79.0 195 28.7
Medtr6g045237 Medicago truncatula HOM05D001538 ORTHO05D000007 1.4e-12 79.0 418 22.2
FvH4_3g06911 Fragaria vesca HOM05D001538 ORTHO05D000007 2.4e-12 78.2 286 26.2
TPR.G2656 Trifolium pratense HOM05D001538 ORTHO05D000007 5.3e-12 77.0 200 27.0
Aqoxy5G03703 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 6.9e-12 76.6 218 27.1
TPR.G38577 Trifolium pratense HOM05D001538 ORTHO05D000007 6.9e-12 76.6 223 28.3
Aqoxy2G00535 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 9.0e-12 76.3 262 27.1
Lj3P676T23 Lonicera japonica HOM05D001538 ORTHO05D000007 9.0e-12 76.3 232 24.6
Lju760C7G6 Lonicera japonica HOM05D012945 ORTHO05D000007 1.5e-11 75.5 124 37.1
Medtr4g060870 Medicago truncatula HOM05D001538 ORTHO05D000007 2.6e-11 74.7 256 24.2
Phvul.004G102300 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 2.6e-11 74.7 70 48.6
Aqoxy5G03278 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 3.4e-11 74.3 267 27.7
FvH4_7g13962 Fragaria vesca HOM05D001538 ORTHO05D000007 3.4e-11 74.3 101 35.6
Medtr6g049130 Medicago truncatula HOM05D001538 ORTHO05D000007 3.4e-11 74.3 192 30.7
PSO675G8250 Papaver somniferum HOM05D001538 ORTHO05D000007 4.4e-11 73.9 213 29.1
Lju225C4G7 Lonicera japonica HOM05D001538 ORTHO05D011045 9.9e-11 72.8 269 29.0
Medtr7g445700 Medicago truncatula HOM05D001538 ORTHO05D000007 9.9e-11 72.8 242 26.0
Lju427A2T11 Lonicera japonica HOM05D001538 ORTHO05D000007 1.3e-10 72.4 189 27.5
Lju4617A0T18 Lonicera japonica HOM05D001538 ORTHO05D000007 1.3e-10 72.4 88 40.9
Medtr3g449600 Medicago truncatula HOM05D001538 ORTHO05D000007 2.2e-10 71.6 190 28.4
TPR.G25855 Trifolium pratense HOM05D001538 ORTHO05D000007 2.2e-10 71.6 100 43.0
Aqoxy4G01322 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 2.9e-10 71.2 215 27.0
PSO761G0353 Papaver somniferum HOM05D001538 ORTHO05D000007 2.9e-10 71.2 238 29.0
FvH4_1g13572 Fragaria vesca HOM05D001538 ORTHO05D000007 8.4e-10 69.7 272 26.8
Lj5C834G10 Lonicera japonica HOM05D001538 ORTHO05D000007 8.4e-10 69.7 68 54.4
Phvul.002G232500 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 8.4e-10 69.7 70 47.1
Medtr1g032900 Medicago truncatula HOM05D016686 ORTHO05D000007 1.4e-09 68.9 345 25.2
FvH4_3g10372 Fragaria vesca HOM05D001538 ORTHO05D000007 1.9e-09 68.6 95 33.7
Psat3g124560 Pisum sativum HOM05D001538 ORTHO05D000007 1.9e-09 68.6 201 28.4
TPR.G23606 Trifolium pratense HOM05D001538 ORTHO05D000007 1.9e-09 68.6 213 25.8
Lj3P309T4 Lonicera japonica HOM05D001538 ORTHO05D000007 2.4e-09 68.2 110 36.4
Phvul.004G102600 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 2.4e-09 68.2 70 45.7
Atru.chr1.1869 Acer truncatum HOM05D001538 ORTHO05D000007 3.2e-09 67.8 216 25.5
Aqoxy3G02984 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 7.1e-09 66.6 240 27.1
FvH4_4g05601 Fragaria vesca HOM05D001538 ORTHO05D000007 7.1e-09 66.6 284 23.6
Lj2C1218G12 Lonicera japonica HOM05D001538 ORTHO05D000007 7.1e-09 66.6 53 52.8
Lalb_Chr02g0151671 Lupinus albus HOM05D001538 ORTHO05D000007 7.1e-09 66.6 70 47.1
Medtr4g093740 Medicago truncatula HOM05D001538 ORTHO05D000007 7.1e-09 66.6 218 22.5
Medtr0012s0140 Medicago truncatula HOM05D001538 ORTHO05D000007 1.2e-08 65.9 109 36.7
TPR.G19697 Trifolium pratense HOM05D001538 ORTHO05D004353 1.2e-08 65.9 361 24.9
TPR.G24447 Trifolium pratense HOM05D000003 ORTHO05D000006 1.2e-08 65.9 268 22.8
Medtr0195s0010 Medicago truncatula HOM05D001538 ORTHO05D000007 1.6e-08 65.5 101 31.7
Medtr0195s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 1.6e-08 65.5 101 31.7
Medtr5g048840 Medicago truncatula HOM05D001538 ORTHO05D000007 1.6e-08 65.5 71 38.0
TPR.G32743 Trifolium pratense HOM05D001538 ORTHO05D000007 2.1e-08 65.1 253 26.1
TPR.G39675 Trifolium pratense HOM05D001538 ORTHO05D000007 3.5e-08 64.3 102 38.2
Lj6A56G21 Lonicera japonica HOM05D001538 ORTHO05D000007 4.6e-08 63.9 368 29.1
Lalb_Chr09g0334161 Lupinus albus HOM05D001538 ORTHO05D000007 4.6e-08 63.9 70 44.3
Aqoxy4G00948 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 6.0e-08 63.5 255 25.9
Medtr8g063620 Medicago truncatula HOM05D001538 ORTHO05D000007 6.0e-08 63.5 108 32.4
Medtr8g104770 Medicago truncatula HOM05D001538 ORTHO05D000007 6.0e-08 63.5 80 37.5
Phvul.009G187600 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 6.0e-08 63.5 175 31.4
TPR.G15478 Trifolium pratense HOM05D001538 ORTHO05D000007 6.0e-08 63.5 104 34.6
Aqoxy1G01858 Aquilegia oxysepala HOM05D000072 ORTHO05D000026 1.0e-07 62.8 224 27.2
Lj4P42T72 Lonicera japonica HOM05D001538 ORTHO05D000007 1.0e-07 62.8 76 44.7
Medtr4g035630 Medicago truncatula HOM05D001538 ORTHO05D000007 1.0e-07 62.8 64 42.2
Medtr4g096760 Medicago truncatula HOM05D001538 ORTHO05D000007 1.0e-07 62.8 286 24.1
Phvul.004G102400 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 1.0e-07 62.8 70 41.4
Psat3g128360 Pisum sativum HOM05D001538 ORTHO05D000007 1.0e-07 62.8 70 41.4
Aqoxy4G00128 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 1.3e-07 62.4 237 27.0
Aqoxy7G02800 Aquilegia oxysepala HOM05D000024 ORTHO05D000007 1.3e-07 62.4 231 28.6
PSO017G2083 Papaver somniferum HOM05D002145 ORTHO05D000007 1.3e-07 62.4 228 25.4
TPR.G28466 Trifolium pratense HOM05D001538 ORTHO05D000007 1.3e-07 62.4 69 42.0
Atru.chr3.1667 Acer truncatum HOM05D000003 ORTHO05D000004 1.7e-07 62.0 205 29.8
Lj1P491T18 Lonicera japonica HOM05D001538 ORTHO05D000007 2.3e-07 61.6 93 32.3
Lj3P111T5 Lonicera japonica HOM05D001538 ORTHO05D000007 2.3e-07 61.6 45 57.8
Lj3P269T5 Lonicera japonica HOM05D001538 ORTHO05D000007 2.3e-07 61.6 52 55.8
Medtr8g445450 Medicago truncatula HOM05D001538 ORTHO05D000007 2.3e-07 61.6 107 36.4
PSO478G1067 Papaver somniferum HOM05D002145 ORTHO05D000007 2.3e-07 61.6 242 24.8
Lj1A253G10 Lonicera japonica HOM05D043681 ORTHO05D000007 3.9e-07 60.8 79 36.7
Medtr1g063810 Medicago truncatula HOM05D001538 ORTHO05D000007 3.9e-07 60.8 70 35.7
Psat7g105720 Pisum sativum HOM05D001538 ORTHO05D000007 3.9e-07 60.8 67 44.8
TPR.G16991 Trifolium pratense HOM05D001538 ORTHO05D000007 3.9e-07 60.8 106 34.0
Aqoxy2G02235 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 5.1e-07 60.5 267 24.0
Medtr1g033070 Medicago truncatula HOM05D001538 ORTHO05D000007 5.1e-07 60.5 70 38.6
Phvul.004G102200 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 5.1e-07 60.5 70 41.4
Medtr1g034250 Medicago truncatula HOM05D001538 ORTHO05D000007 6.6e-07 60.1 97 35.1
Medtr2g438650 Medicago truncatula HOM05D001538 ORTHO05D000007 6.6e-07 60.1 101 35.6
Medtr0566s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 8.7e-07 59.7 101 31.7
Medtr4g108010 Medicago truncatula HOM05D001538 ORTHO05D000007 1.1e-06 59.3 70 37.1
Medtr7g037570 Medicago truncatula HOM05D001538 ORTHO05D000007 1.1e-06 59.3 57 47.4
PSO063G6686 Papaver somniferum HOM05D002145 ORTHO05D000007 1.5e-06 58.9 222 27.0
TPR.G28566 Trifolium pratense HOM05D001538 ORTHO05D000007 1.5e-06 58.9 67 37.3
Aqoxy1G02954 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 1.9e-06 58.5 228 27.6
FvH4_2g29541 Fragaria vesca HOM05D001538 ORTHO05D000007 2.5e-06 58.2 113 33.6
Lju41C61G11 Lonicera japonica HOM05D001538 ORTHO05D000007 2.5e-06 58.2 30 90.0
PSO170G2308 Papaver somniferum HOM05D001538 ORTHO05D000007 2.5e-06 58.2 169 30.8
TPR.G40148 Trifolium pratense HOM05D001538 ORTHO05D000007 2.5e-06 58.2 69 43.5
TPR.G14439 Trifolium pratense HOM05D000092 ORTHO05D000042 3.3e-06 57.8 74 37.8
TPR.G576 Trifolium pratense HOM05D001538 ORTHO05D000007 3.3e-06 57.8 70 37.1
Aqoxy2G01417 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 4.3e-06 57.4 64 40.6
Aqoxy3G01784 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 4.3e-06 57.4 74 37.8
PSO832G3078 Papaver somniferum HOM05D002145 ORTHO05D000007 4.3e-06 57.4 263 24.0
TPR.G36504 Trifolium pratense HOM05D000250 ORTHO05D000007 4.3e-06 57.4 63 44.4
Lj5P781T15 Lonicera japonica HOM05D001538 ORTHO05D000007 7.4e-06 56.6 76 30.3
Medtr5g079060 Medicago truncatula HOM05D001538 ORTHO05D000007 7.4e-06 56.6 70 38.6
Lj5P729T13 Lonicera japonica HOM05D048061 ORTHO05D000007 9.6e-06 56.2 80 37.5
Medtr7g013110 Medicago truncatula HOM05D016686 ORTHO05D000007 9.6e-06 56.2 69 37.7


User provided reference genes

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