Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C689T19 Lonicera japonica HOM05D001712 ORTHO05D234972 8.0e-61 236.9 117 100.0
Lj6C284T4 Lonicera japonica HOM05D001712 ORTHO05D001731 3.3e-14 82.0 50 84.0
Lj9C689T18 Lonicera japonica HOM05D001712 ORTHO05D001731 4.7e-13 78.2 54 74.1
Dinv42735 Davidia involucrata HOM05D001712 ORTHO05D001731 4.9e-10 68.2 50 68.0
Dinv43366 Davidia involucrata HOM05D001712 ORTHO05D001731 4.9e-10 68.2 50 68.0
TPR.G29758 Trifolium pratense HOM05D001712 ORTHO05D001731 2.4e-09 65.9 55 61.8
FvH4_4g09260 Fragaria vesca HOM05D001712 ORTHO05D001731 3.2e-09 65.5 50 68.0
FAN12G0300 Fragaria x ananassa HOM05D001712 ORTHO05D001731 3.2e-09 65.5 50 68.0
Hma1.2p1_1646F.1_g295490 Hydrangea macrophylla HOM05D001712 ORTHO05D001731 4.1e-09 65.1 50 64.0
Ciclev10010757m.g Citrus clementina HOM05D001712 ORTHO05D001731 7.1e-09 64.3 54 59.3
arahy.Tifrunner.gnm1.ann1.RM06CW Arachis hypogaea HOM05D001712 ORTHO05D001731 9.2e-09 63.9 55 60.0
RcHm_v2.0_Chr7g0220311 Rosa chinensis HOM05D001712 ORTHO05D001731 2.7e-08 62.4 50 66.0
Thecc.09G170500 Theobroma cacao HOM05D001712 ORTHO05D001731 2.7e-08 62.4 50 64.0
TAR383G0543 Trochodendron aralioides HOM05D001712 ORTHO05D001731 2.7e-08 62.4 50 66.0
arahy.Tifrunner.gnm1.ann1.1AH909 Arachis hypogaea HOM05D001712 ORTHO05D001731 3.5e-08 62.0 55 58.2
Ciclev10010452m.g Citrus clementina HOM05D001712 ORTHO05D001731 3.5e-08 62.0 55 60.0
GSVIVG01029178001 Vitis vinifera HOM05D001712 ORTHO05D001731 4.6e-08 61.6 55 58.2
COL.COLO4_04646 Corchorus olitorius HOM05D001712 ORTHO05D001731 6.0e-08 61.2 50 62.0
DCAR_020117 Daucus carota HOM05D001712 ORTHO05D001731 1.0e-07 60.5 47 61.7
Gohir.A05G005400 Gossypium hirsutum HOM05D001712 ORTHO05D001731 1.0e-07 60.5 51 64.7
Psat1g010760 Pisum sativum HOM05D001712 ORTHO05D001731 1.7e-07 59.7 50 62.0
Prupe.1G088200 Prunus persica HOM05D001712 ORTHO05D001731 1.7e-07 59.7 108 39.8
Lj3g0013915 Lotus japonicus HOM05D001712 ORTHO05D001731 2.3e-07 59.3 50 58.0
TWI34G0556 Tripterygium wilfordii HOM05D001712 ORTHO05D001731 2.3e-07 59.3 51 64.7
Gohir.D05G006200 Gossypium hirsutum HOM05D001712 ORTHO05D001731 3.0e-07 58.9 51 62.7
Gorai.009G006100 Gossypium raimondii HOM05D001712 ORTHO05D001731 3.0e-07 58.9 51 62.7
Manes.14G150800 Manihot esculenta HOM05D001712 ORTHO05D001731 3.9e-07 58.5 55 54.5
Medtr2g070310 Medicago truncatula HOM05D001712 ORTHO05D001731 3.9e-07 58.5 55 56.4
Phvul.005G052500 Phaseolus vulgaris HOM05D001712 ORTHO05D001731 5.1e-07 58.2 50 60.0
Ciclev10010328m.g Citrus clementina HOM05D001712 ORTHO05D001731 6.6e-07 57.8 55 58.2
Glyma.15G251300 Glycine max HOM05D001712 ORTHO05D001731 1.9e-06 56.2 52 59.6
VMungo1080G1556 Vigna mungo HOM05D001712 ORTHO05D001731 1.9e-06 56.2 50 56.0
Actinidia01415 Actinidia chinensis HOM05D001712 ORTHO05D001731 2.5e-06 55.8 50 58.0
Ciclev10010369m.g Citrus clementina HOM05D001712 ORTHO05D001731 2.5e-06 55.8 50 56.0
Ca_03462_v3 Cicer arietinum L. HOM05D001712 ORTHO05D001731 7.3e-06 54.3 56 57.1
MBI14_g17351_MAGBIO Magnolia biondii HOM05D001712 ORTHO05D001731 7.3e-06 54.3 50 58.0


User provided reference genes

Program Settings