Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C630T11 Lonicera japonica HOM05D003920 ORTHO05D004877 6.7e-198 693.7 332 100.0
COL.COLO4_23923 Corchorus olitorius HOM05D003920 ORTHO05D004877 6.6e-145 517.7 333 74.5
Dinv43454 Davidia involucrata HOM05D003920 ORTHO05D004877 7.6e-141 504.2 359 68.8
TAR633G1074 Trochodendron aralioides HOM05D003920 ORTHO05D004877 2.4e-139 499.2 320 74.1
Prupe.2G011700 Prunus persica HOM05D003920 ORTHO05D004877 7.6e-133 477.6 364 65.9
Nn2g15431 Nelumbo nucifera HOM05D003920 ORTHO05D004877 1.3e-132 476.9 352 65.6
Manes.10G144700 Manihot esculenta HOM05D003920 ORTHO05D004877 1.7e-132 476.5 356 64.6
FAN06G2354 Fragaria x ananassa HOM05D003920 ORTHO05D004877 2.9e-132 475.7 361 66.8
FvH4_7g00890 Fragaria vesca HOM05D003920 ORTHO05D004877 4.9e-132 474.9 361 66.5
MD02G1313900 Malus domestica HOM05D003920 ORTHO05D004877 9.3e-131 470.7 366 65.6
Nn7g36164 Nelumbo nucifera HOM05D003920 ORTHO05D004877 4.6e-130 468.4 356 64.9
Sabra09G0046300 Salix brachista HOM05D003920 ORTHO05D004877 6.7e-129 464.5 355 63.9
Aqoxy2G00138 Aquilegia oxysepala HOM05D003920 ORTHO05D004877 1.1e-128 463.8 363 62.8
MD07G1008500 Malus domestica HOM05D003920 ORTHO05D004877 3.3e-128 462.2 365 64.1
Potri.001G268200 Populus trichocarpa HOM05D003920 ORTHO05D004877 4.3e-128 461.8 359 64.3
Rhsim07G0054700 Rhododendron simsii HOM05D003920 ORTHO05D004877 3.7e-127 458.8 353 64.6
HanXRQChr01g0016141 Helianthus annuus HOM05D003920 ORTHO05D004877 4.8e-127 458.4 352 63.4
Lalb_Chr01g0015291 Lupinus albus HOM05D003920 ORTHO05D004877 1.8e-126 456.4 354 62.4
Glyma.15G272400 Glycine max HOM05D003920 ORTHO05D004877 2.4e-126 456.1 361 63.2
Phvul.005G019900 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 5.3e-126 454.9 360 62.8
Lj3g0003225 Lotus japonicus HOM05D003920 ORTHO05D004877 9.0e-126 454.1 359 63.0
Sabra16G0164300 Salix brachista HOM05D003920 ORTHO05D004877 9.0e-126 454.1 358 63.1
Glyma.08G153800 Glycine max HOM05D003920 ORTHO05D004877 1.5e-125 453.4 359 62.4
Psat5g204200 Pisum sativum HOM05D003920 ORTHO05D004877 1.5e-125 453.4 352 62.2
TAR369G0176 Trochodendron aralioides HOM05D003920 ORTHO05D004877 1.5e-125 453.4 361 62.6
ECA248G0446 Erigeron canadensis HOM05D003920 ORTHO05D004877 4.5e-125 451.8 352 64.2
Eucgr.J01264 Eucalyptus grandis HOM05D003920 ORTHO05D004877 4.5e-125 451.8 357 62.5
Ca_27172_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 5.8e-125 451.4 353 62.6
Medtr3g028190 Medicago truncatula HOM05D003920 ORTHO05D004877 5.8e-125 451.4 353 62.6
Sopen10g011530 Solanum pennellii HOM05D003920 ORTHO05D004877 5.8e-125 451.4 358 63.1
DCAR_003208 Daucus carota HOM05D003920 ORTHO05D004877 7.6e-125 451.1 358 64.5
PSO339G5616 Papaver somniferum HOM05D003920 ORTHO05D004877 9.9e-125 450.7 361 61.2
Gohir.D08G038400 Gossypium hirsutum HOM05D003920 ORTHO05D004877 1.3e-124 450.3 360 63.3
Gorai.004G036900 Gossypium raimondii HOM05D003920 ORTHO05D004877 1.3e-124 450.3 360 63.3
PSO384G3532 Papaver somniferum HOM05D003920 ORTHO05D004877 1.7e-124 449.9 361 61.5
Potri.009G062600 Populus trichocarpa HOM05D003920 ORTHO05D004877 2.2e-124 449.5 357 63.3
Gohir.A08G027700 Gossypium hirsutum HOM05D003920 ORTHO05D004877 2.9e-124 449.1 359 63.8
Ciclev10031666m.g Citrus clementina HOM05D003920 ORTHO05D004877 4.9e-124 448.4 287 73.2
CAN.G709.1 Capsicum annuum HOM05D003920 ORTHO05D004877 8.4e-124 447.6 353 62.3
Solyc10g038000.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 8.4e-124 447.6 358 62.6
VMungo1080G0709 Vigna mungo HOM05D003920 ORTHO05D004877 8.4e-124 447.6 360 61.4
arahy.Tifrunner.gnm1.ann1.LBVL0K Arachis hypogaea HOM05D003920 ORTHO05D004877 1.1e-123 447.2 358 62.6
Peaxi162Scf00428g00618 Petunia axillaris HOM05D003920 ORTHO05D004877 1.4e-123 446.8 358 61.2
arahy.Tifrunner.gnm1.ann1.Z50281 Arachis hypogaea HOM05D003920 ORTHO05D004877 1.9e-123 446.4 355 62.3
Peaxi162Scf00407g00639 Petunia axillaris HOM05D003920 ORTHO05D004877 2.4e-123 446.0 328 65.2
QL04p007133 Quercus lobata HOM05D003920 ORTHO05D004877 3.9e-121 438.7 323 68.1
TWI73G0359 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 5.1e-121 438.3 377 57.8
DCAR_022405 Daucus carota HOM05D003920 ORTHO05D004877 1.5e-120 436.8 359 62.1
Migut.N01471 Erythranthe guttata HOM05D003920 ORTHO05D004877 2.5e-120 436.0 354 61.0
TPR.G12140 Trifolium pratense HOM05D003920 ORTHO05D004877 5.6e-120 434.9 342 61.4
ATR0605G260 Amborella trichopoda HOM05D003920 ORTHO05D004877 2.8e-119 432.6 358 59.2
PGR044G2195 Punica granatum HOM05D003920 ORTHO05D004877 1.8e-118 429.9 361 57.6
CSS0030964 Camellia sinensis var. sinensis HOM05D003920 ORTHO05D004877 5.8e-117 424.9 323 64.7
AUR62009376 Chenopodium quinoa HOM05D003920 ORTHO05D004877 5.8e-117 424.9 334 61.1
Nitab4.5_0011837g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 5.8e-117 424.9 368 56.5
Haze_03212 Corylus avellana HOM05D003920 ORTHO05D004877 1.0e-116 424.1 319 65.5
Gorai.004G173300 Gossypium raimondii HOM05D003920 ORTHO05D004877 1.0e-116 424.1 352 59.9
Sed0011667 Sechium edule HOM05D003920 ORTHO05D004877 2.2e-116 422.9 329 64.7
Nitab4.5_0000634g0100 Nicotiana tabacum HOM05D003920 ORTHO05D004877 8.4e-116 421.0 379 54.6
MBI04_g13623_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D004877 1.1e-115 420.6 347 59.9
vmacro13655 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 1.9e-115 419.9 423 53.4
THA.LOC104827426 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 5.5e-115 418.3 352 58.8
SGA_v2.0_scaffold167G38446 Striga asiatica HOM05D003920 ORTHO05D004877 9.3e-115 417.5 333 61.0
CDE04G0006 Ceratophyllum demersum HOM05D003920 ORTHO05D004877 1.2e-114 417.2 364 56.0
RcHm_v2.0_Chr1g0315781 Rosa chinensis HOM05D003920 ORTHO05D004877 1.0e-113 414.1 325 64.3
Solyc01g087030.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 1.0e-113 414.1 329 61.7
EL10Ac2g04315 Beta vulgaris HOM05D003920 ORTHO05D004877 1.8e-113 413.3 333 61.3
Sopen01g034110 Solanum pennellii HOM05D003920 ORTHO05D004877 1.8e-113 413.3 329 61.4
FAN01G3017 Fragaria x ananassa HOM05D003920 ORTHO05D004877 3.9e-113 412.1 325 64.0
FAN03G2194 Fragaria x ananassa HOM05D003920 ORTHO05D004877 8.7e-113 411.0 325 63.7
Sp1g00020 Schrenkiella parvula HOM05D003920 ORTHO05D004877 1.5e-112 410.2 357 58.5
THA.LOC104819067 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 5.7e-112 408.3 357 56.9
Gohir.D08G166100 Gossypium hirsutum HOM05D003920 ORTHO05D004877 7.4e-112 407.9 277 69.3
SalBow5G4770 Salvia bowleyana HOM05D003920 ORTHO05D004877 2.8e-111 406.0 353 57.2
Thhalv10010518m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 1.1e-110 404.1 350 57.4
Thecc.01G412100 Theobroma cacao HOM05D003920 ORTHO05D004877 1.1e-110 404.1 323 62.5
Atru.chr11.2647 Acer truncatum HOM05D003920 ORTHO05D004877 1.4e-110 403.7 319 62.4
Sc10g0000010 Simmondsia chinensis HOM05D003920 ORTHO05D004877 1.4e-110 403.7 351 58.4
BcaC07g37767 Brassica carinata HOM05D003920 ORTHO05D004877 1.5e-109 400.2 328 58.8
CARHR291420 Cardamine hirsuta HOM05D003920 ORTHO05D004877 2.0e-109 399.8 350 57.4
BraA08t33064Z Brassica rapa HOM05D003920 ORTHO05D004877 4.5e-109 398.7 325 59.7
SEGI_34678 Sequoiadendron giganteum HOM05D003920 ORTHO05D004877 3.8e-108 395.6 322 58.4
Thhalv10021103m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 1.4e-107 393.7 340 56.5
unitig_85.g27216 Utricularia gibba HOM05D003920 ORTHO05D004877 1.4e-107 393.7 346 55.8
MSTRG.5016 Avicennia marina HOM05D003920 ORTHO05D004877 2.5e-107 392.9 324 59.0
Zm00001eb381600 Zea mays HOM05D003920 ORTHO05D004877 5.5e-107 391.7 366 55.5
Pp3c5_25680 Physcomitrium patens HOM05D003920 ORTHO05D004877 9.3e-107 391.0 325 57.2
AT3G08505 Arabidopsis thaliana HOM05D003920 ORTHO05D004877 1.6e-106 390.2 323 58.5
HPP92_005768 Vanilla planifolia HOM05D003920 ORTHO05D004877 6.1e-106 388.3 363 53.7
Aa31LG10G17420 Aethionema arabicum HOM05D003920 ORTHO05D004877 1.0e-105 387.5 430 48.4
Lsat_1_v5_gn_1_107981 Lactuca sativa HOM05D003920 ORTHO05D004877 1.0e-105 387.5 323 60.7
TWI53G1741 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 1.0e-105 387.5 282 66.3
CARHR082810 Cardamine hirsuta HOM05D003920 ORTHO05D004877 2.3e-105 386.3 223 74.9
AL3G19480 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 3.0e-105 386.0 323 57.9
A08p28590 Brassica napus HOM05D003920 ORTHO05D004877 5.1e-105 385.2 320 58.8
Sp3g06990 Schrenkiella parvula HOM05D003920 ORTHO05D004877 5.7e-104 381.7 340 55.0
BraA03t12740Z Brassica rapa HOM05D003920 ORTHO05D004877 2.2e-103 379.8 244 69.7
BcaB04g21254 Brassica carinata HOM05D003920 ORTHO05D004877 4.8e-103 378.6 332 56.0
Cc02_g27790 Coffea canephora HOM05D003920 ORTHO05D004877 4.8e-103 378.6 330 58.5
Lj7A569G59 Lonicera japonica HOM05D003920 ORTHO05D004877 1.4e-102 377.1 287 62.4
BcaC09g47976 Brassica carinata HOM05D003920 ORTHO05D004877 1.8e-102 376.7 223 72.6
BraA01t04343Z Brassica rapa HOM05D003920 ORTHO05D004877 2.4e-102 376.3 223 72.2
Carub.0003s0765 Capsella rubella HOM05D003920 ORTHO05D004877 3.1e-102 375.9 325 56.6
BolC3t16599H Brassica oleracea HOM05D003920 ORTHO05D004877 1.2e-101 374.0 234 71.4
A03p35650 Brassica napus HOM05D003920 ORTHO05D004877 2.6e-101 372.9 212 75.9
BcaB03g11569 Brassica carinata HOM05D003920 ORTHO05D004877 4.5e-101 372.1 323 55.4
Nitab4.5_0001299g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 2.2e-100 369.8 317 61.8
C03p43290 Brassica napus HOM05D003920 ORTHO05D004877 1.1e-99 367.5 222 73.4
BcaC01g04265 Brassica carinata HOM05D003920 ORTHO05D004877 7.2e-99 364.8 222 73.0
ClCG09G004250 Citrullus lanatus HOM05D003920 ORTHO05D004877 1.6e-98 363.6 273 67.4
Manes.07G005000 Manihot esculenta HOM05D003920 ORTHO05D004877 6.1e-98 361.7 293 59.7
CsaV3_7G031170 Cucumis sativus L. HOM05D003920 ORTHO05D004877 7.9e-98 361.3 313 59.1
Aa31LG5G18640 Aethionema arabicum HOM05D003920 ORTHO05D004877 2.6e-96 356.3 255 65.9
MELO3C023541.2 Cucumis melo HOM05D003920 ORTHO05D004877 4.4e-96 355.5 313 58.5
Thhalv10023829m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 8.2e-95 351.3 356 51.1
Carub.0005s3016 Capsella rubella HOM05D003920 ORTHO05D004877 4.5e-93 345.5 316 54.1
Actinidia24671 Actinidia chinensis HOM05D003920 ORTHO05D004877 1.0e-92 344.4 246 69.1
A08p10660 Brassica napus HOM05D003920 ORTHO05D004877 1.0e-92 344.4 297 55.9
BolC8t48154H Brassica oleracea HOM05D003920 ORTHO05D004877 2.2e-92 343.2 294 56.1
AL5G46410 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 3.8e-92 342.4 323 54.8
MSTRG.20593 Avicennia marina HOM05D003920 ORTHO05D004877 2.1e-90 336.7 335 50.7
Hund03665 Selenicereus undatus HOM05D003920 ORTHO05D004877 4.7e-90 335.5 291 59.5
Sabra04G0083700 Salix brachista HOM05D003920 ORTHO05D004877 6.1e-90 335.1 300 54.7
AUR62023057 Chenopodium quinoa HOM05D003920 ORTHO05D004877 1.0e-89 334.3 294 56.8
BolC8t49780H Brassica oleracea HOM05D003920 ORTHO05D004877 1.4e-89 334.0 298 55.0
C08p21410 Brassica napus HOM05D003920 ORTHO05D004877 5.2e-89 332.0 218 67.4
vmacro08182 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 2.0e-88 330.1 293 57.0
Nitab4.5_0004786g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.3e-87 327.4 340 52.4
Mapoly0042s0020 Marchantia polymorpha HOM05D003920 ORTHO05D004877 8.2e-87 324.7 223 61.9
Zm00001eb252860 Zea mays HOM05D003920 ORTHO05D004877 1.8e-86 323.6 293 53.9
SMO203G0245 Selaginella moellendorffii HOM05D003920 ORTHO05D004877 4.1e-86 322.4 321 51.7
PGR044G2672 Punica granatum HOM05D003920 ORTHO05D004877 2.9e-84 316.2 196 68.9
Sp5g00030 Schrenkiella parvula HOM05D003920 ORTHO05D004877 6.5e-84 315.1 250 61.6
Gohir.A08G145200 Gossypium hirsutum HOM05D003920 ORTHO05D004877 8.0e-82 308.1 286 55.6
Peaxi162Scf00148g00610 Petunia axillaris HOM05D003920 ORTHO05D004877 1.4e-81 307.4 281 53.0
Actinidia36714 Actinidia chinensis HOM05D003920 ORTHO05D004877 6.3e-79 298.5 321 51.4
Potri.004G134400 Populus trichocarpa HOM05D003920 ORTHO05D004877 6.3e-79 298.5 290 51.7
Actinidia31057 Actinidia chinensis HOM05D003920 ORTHO05D004877 2.0e-77 293.5 357 47.9
SGA_v2.0_scaffold24G10678 Striga asiatica HOM05D003920 ORTHO05D004877 5.9e-77 292.0 333 43.5
arahy.Tifrunner.gnm1.ann1.3CZ6TN Arachis hypogaea HOM05D003920 ORTHO05D004877 5.0e-76 288.9 321 48.6
Glyma.15G273000 Glycine max HOM05D003920 ORTHO05D004877 6.5e-76 288.5 314 49.0
BcaC07g39147 Brassica carinata HOM05D003920 ORTHO05D004877 7.2e-75 285.0 297 50.2
arahy.Tifrunner.gnm1.ann1.NHZH5I Arachis hypogaea HOM05D003920 ORTHO05D004877 9.4e-75 284.6 318 48.7
VMungo1080G1751 Vigna mungo HOM05D003920 ORTHO05D004877 1.6e-74 283.9 319 47.3
Nitab4.5_0000254g0170 Nicotiana tabacum HOM05D003920 ORTHO05D004877 4.7e-74 282.3 281 50.9
Lalb_Chr20g0108061 Lupinus albus HOM05D003920 ORTHO05D004877 3.0e-73 279.6 316 45.9
Lalb_Chr01g0015331 Lupinus albus HOM05D003920 ORTHO05D004877 6.8e-73 278.5 320 47.2
Glyma.08G154100 Glycine max HOM05D003920 ORTHO05D004877 1.2e-72 277.7 313 48.6
Lj3g0002246 Lotus japonicus HOM05D003920 ORTHO05D004877 1.5e-72 277.3 319 46.1
TPR.G12281 Trifolium pratense HOM05D003920 ORTHO05D004877 1.7e-71 273.9 317 47.0
Ca_14370_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 2.2e-71 273.5 316 46.8
Medtr3g028170 Medicago truncatula HOM05D003920 ORTHO05D004877 3.7e-71 272.7 310 47.1
Phvul.005G020000 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 4.5e-69 265.8 320 45.3
Psat5g204240 Pisum sativum HOM05D003920 ORTHO05D004877 5.9e-69 265.4 317 44.8
AagrBONN_evm.TU.Sc2ySwM_344.3645 Anthoceros agrestis HOM05D003920 ORTHO05D004877 6.1e-66 255.4 197 57.4
Cre06.g278136 Chlamydomonas reinhardtii HOM05D003920 ORTHO05D004877 5.9e-61 238.8 223 47.1
Nitab4.5_0003190g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 6.6e-60 235.3 258 47.7
arahy.Tifrunner.gnm1.ann1.YQ2HRW Arachis hypogaea HOM05D003920 ORTHO05D004877 2.6e-56 223.4 305 43.9
arahy.Tifrunner.gnm1.ann1.HIY6S0 Arachis hypogaea HOM05D003920 ORTHO05D004877 9.8e-56 221.5 303 42.9
GSVIVG01032073001 Vitis vinifera HOM05D003920 ORTHO05D004877 1.7e-52 210.7 109 85.3
Oeu039134.1 Olea europaea HOM05D003920 ORTHO05D004877 1.1e-51 208.0 110 85.5
PRCOL_00005356 Prasinoderma coloniale HOM05D003920 ORTHO05D004877 1.1e-51 208.0 356 34.3
unitig_26.g8826 Utricularia gibba HOM05D003920 ORTHO05D004877 1.5e-48 197.6 130 64.6
Phvul.011G110100 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 2.8e-42 176.8 93 81.7
TPR.G31394 Trifolium pratense HOM05D002628 ORTHO05D002785 1.1e-17 95.1 102 42.2
QL04p032014 Quercus lobata HOM05D003920 ORTHO05D004877 1.0e-12 78.6 38 81.6
QL04p032319 Quercus lobata HOM05D003920 ORTHO05D004877 1.8e-12 77.8 48 66.7
Cc02_g27780 Coffea canephora HOM05D003920 ORTHO05D017698 1.1e-11 75.1 43 81.4
MBI17_g06171_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D017698 1.5e-11 74.7 82 51.2
BolC8t49779H Brassica oleracea HOM05D003920 ORTHO05D017698 3.7e-10 70.1 40 77.5
BraA08t34788Z Brassica rapa HOM05D003920 ORTHO05D017698 3.7e-10 70.1 40 77.5
BolC8t48153H Brassica oleracea HOM05D003920 ORTHO05D017698 8.1e-10 68.9 44 70.5
arahy.Tifrunner.gnm1.ann1.RPY2B8 Arachis hypogaea HOM05D004014 ORTHO05D031593 7.6e-08 62.4 42 71.4
QL05p013448 Quercus lobata HOM05D001342 ORTHO05D017698 2.2e-07 60.8 45 64.4
C08p21400 Brassica napus HOM05D003920 ORTHO05D017698 3.8e-07 60.1 50 60.0
QL93p2025_0050 Quercus lobata HOM05D003920 ORTHO05D337666 4.2e-06 56.6 30 83.3
FAN10G2408 Fragaria x ananassa HOM05D003920 ORTHO05D017698 9.3e-06 55.5 48 58.3


User provided reference genes

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