Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A53G21 Lonicera japonica HOM05D004745 ORTHO05D005626 1.7e-34 148.7 70 100.0
Lj9C59T8 Lonicera japonica HOM05D004745 ORTHO05D005626 1.7e-34 148.7 70 100.0
Lj9A502G38 Lonicera japonica HOM05D004745 ORTHO05D005626 1.3e-29 132.5 68 91.2
CSS0020299 Camellia sinensis var. sinensis HOM05D004745 ORTHO05D005626 2.4e-28 128.3 68 86.8
Actinidia01762 Actinidia chinensis HOM05D004745 ORTHO05D005626 6.9e-28 126.7 68 83.8
Rhsim08G0215400 Rhododendron simsii HOM05D004745 ORTHO05D005626 1.2e-27 125.9 68 83.8
Ciclev10026288m.g Citrus clementina HOM05D004745 ORTHO05D005626 1.5e-27 125.6 68 82.4
DCAR_025491 Daucus carota HOM05D004745 ORTHO05D005626 2.0e-27 125.2 66 86.4
Cc04_g04150 Coffea canephora HOM05D004745 ORTHO05D005626 4.5e-27 124.0 68 82.4
Haze_16523 Corylus avellana HOM05D004745 ORTHO05D005626 5.9e-27 123.6 68 82.4
vmacro18973 Vaccinium macrocarpon HOM05D004745 ORTHO05D005626 5.9e-27 123.6 68 83.8
FvH4_6g30190 Fragaria vesca HOM05D004745 ORTHO05D005626 7.7e-27 123.2 68 79.4
FAN14G5774 Fragaria x ananassa HOM05D004745 ORTHO05D005626 1.0e-26 122.9 68 77.9
AUR62011549 Chenopodium quinoa HOM05D004745 ORTHO05D005626 1.3e-26 122.5 68 82.4
MSTRG.22729 Avicennia marina HOM05D004745 ORTHO05D005626 1.7e-26 122.1 68 82.4
Cfa001995 Carpinus fangiana HOM05D004745 ORTHO05D005626 1.7e-26 122.1 68 80.9
CsaV3_4G001440 Cucumis sativus L. HOM05D004745 ORTHO05D005626 1.7e-26 122.1 68 82.4
FAN09G2173 Fragaria x ananassa HOM05D004745 ORTHO05D005626 1.7e-26 122.1 68 79.4
Oeu000434.1 Olea europaea HOM05D004745 ORTHO05D005626 1.7e-26 122.1 68 79.4
Potri.001G171800 Populus trichocarpa HOM05D004745 ORTHO05D005626 1.7e-26 122.1 68 82.4
TAR636G0831 Trochodendron aralioides HOM05D004745 ORTHO05D005626 2.2e-26 121.7 68 82.4
Ca_20430_v3 Cicer arietinum L. HOM05D004745 ORTHO05D005626 2.9e-26 121.3 68 77.9
Ca_29515_v3 Cicer arietinum L. HOM05D004745 ORTHO05D005626 2.9e-26 121.3 68 77.9
Duzib235G0601 Durio zibethinus HOM05D004745 ORTHO05D005626 2.9e-26 121.3 68 82.4
FAN02G3524 Fragaria x ananassa HOM05D004745 ORTHO05D005626 3.8e-26 120.9 68 79.4
Gohir.D10G075900 Gossypium hirsutum HOM05D004745 ORTHO05D005626 3.8e-26 120.9 68 80.9
Gorai.011G081700 Gossypium raimondii HOM05D004745 ORTHO05D005626 3.8e-26 120.9 68 80.9
Sabra01G0139800 Salix brachista HOM05D004745 ORTHO05D005626 3.8e-26 120.9 68 80.9
Actinidia15789 Actinidia chinensis HOM05D004745 ORTHO05D005626 5.0e-26 120.6 68 82.4
AUR62016368 Chenopodium quinoa HOM05D004745 ORTHO05D005626 5.0e-26 120.6 68 80.9
Medtr4g011040 Medicago truncatula HOM05D004745 ORTHO05D005626 5.0e-26 120.6 69 76.8
Psat7g255920 Pisum sativum HOM05D004745 ORTHO05D005626 5.0e-26 120.6 68 77.9
Thecc.06G070400 Theobroma cacao HOM05D004745 ORTHO05D005626 5.0e-26 120.6 68 80.9
Aqoxy7G02119 Aquilegia oxysepala HOM05D004745 ORTHO05D005626 6.5e-26 120.2 68 79.4
ClCG07G012760 Citrullus lanatus HOM05D004745 ORTHO05D005626 6.5e-26 120.2 68 80.9
Hma1.2p1_0394F.1_g143470 Hydrangea macrophylla HOM05D004745 ORTHO05D005626 6.5e-26 120.2 68 79.4
TPR.G38663 Trifolium pratense HOM05D004745 ORTHO05D005626 6.5e-26 120.2 68 79.4
MELO3C017896.2 Cucumis melo HOM05D004745 ORTHO05D005626 8.5e-26 119.8 68 79.4
PGR102G0579 Punica granatum HOM05D004745 ORTHO05D005626 8.5e-26 119.8 68 79.4
RcHm_v2.0_Chr2g0136431 Rosa chinensis HOM05D004745 ORTHO05D005626 8.5e-26 119.8 68 77.9
COL.COLO4_12918 Corchorus olitorius HOM05D004745 ORTHO05D005626 1.1e-25 119.4 68 79.4
MBI04_g07638_MAGBIO Magnolia biondii HOM05D004745 ORTHO05D005626 1.1e-25 119.4 68 80.9
Gohir.A10G075700 Gossypium hirsutum HOM05D004745 ORTHO05D005626 1.4e-25 119.0 68 79.4
Migut.I00794 Erythranthe guttata HOM05D004745 ORTHO05D005626 1.9e-25 118.6 68 76.5
Eucgr.F02539 Eucalyptus grandis HOM05D004745 ORTHO05D005626 1.9e-25 118.6 68 80.9
GSVIVG01017280001 Vitis vinifera HOM05D004745 ORTHO05D005626 1.9e-25 118.6 68 76.5
Cpa.g.sc10.231 Carica papaya HOM05D004745 ORTHO05D005626 2.5e-25 118.2 68 79.4
MD17G1207300 Malus domestica HOM05D004745 ORTHO05D005626 2.5e-25 118.2 68 79.4
QL05p028225 Quercus lobata HOM05D004745 ORTHO05D005626 2.5e-25 118.2 68 79.4
CAN.G1158.5 Capsicum annuum HOM05D004745 ORTHO05D005626 3.2e-25 117.9 68 80.9
CiPaw.01G245300 Carya illinoinensis HOM05D004745 ORTHO05D005626 3.2e-25 117.9 68 79.4
Manes.11G053800 Manihot esculenta HOM05D004745 ORTHO05D005626 3.2e-25 117.9 68 79.4
TWI12G1169 Tripterygium wilfordii HOM05D004745 ORTHO05D005626 3.2e-25 117.9 68 79.4
Prupe.3G081800 Prunus persica HOM05D004745 ORTHO05D005626 4.2e-25 117.5 68 77.9
Sc06g0004020 Simmondsia chinensis HOM05D004745 ORTHO05D005626 4.2e-25 117.5 68 77.9
Solyc07g015860.3 Solanum lycopersicum HOM05D004745 ORTHO05D005626 4.2e-25 117.5 68 80.9
Sopen07g005700 Solanum pennellii HOM05D004745 ORTHO05D005626 4.2e-25 117.5 68 80.9
VMungo0331G1340 Vigna mungo HOM05D004745 ORTHO05D005626 4.2e-25 117.5 68 79.4
SGA_v2.0_scaffold5G02669 Striga asiatica HOM05D004745 ORTHO05D005626 5.5e-25 117.1 68 77.9
ATR1156G012 Amborella trichopoda HOM05D004745 ORTHO05D005626 7.2e-25 116.7 68 79.4
CANSAT56G2452 Cannabis sativa HOM05D004745 ORTHO05D005626 7.2e-25 116.7 68 79.4
SalBow2G2198 Salvia bowleyana HOM05D004745 ORTHO05D005626 7.2e-25 116.7 68 79.4
Hund06573 Selenicereus undatus HOM05D004745 ORTHO05D005626 7.2e-25 116.7 68 77.9
ECA232G3489 Erigeron canadensis HOM05D004745 ORTHO05D005626 9.4e-25 116.3 68 76.5
Nitab4.5_0000413g0130 Nicotiana tabacum HOM05D004745 ORTHO05D005626 1.2e-24 115.9 68 79.4
Nitab4.5_0009683g0020 Nicotiana tabacum HOM05D004745 ORTHO05D005626 1.2e-24 115.9 68 79.4
ECA234G2450 Erigeron canadensis HOM05D004745 ORTHO05D005626 1.6e-24 115.5 68 76.5
ECA238G4104 Erigeron canadensis HOM05D004745 ORTHO05D005626 1.6e-24 115.5 68 76.5
ECA240G0712 Erigeron canadensis HOM05D004745 ORTHO05D005626 1.6e-24 115.5 68 76.5
Os01g0555800 Oryza sativa ssp. japonica HOM05D004745 ORTHO05D005626 1.6e-24 115.5 68 75.0
Atru.chr1.3054 Acer truncatum HOM05D004745 ORTHO05D005626 2.1e-24 115.2 68 76.5
Ca_01071_v3 Cicer arietinum L. HOM05D004745 ORTHO05D005626 2.1e-24 115.2 68 76.5
PSO170G2068 Papaver somniferum HOM05D004745 ORTHO05D005626 2.1e-24 115.2 68 76.5
PSO455G0289 Papaver somniferum HOM05D004745 ORTHO05D005626 2.1e-24 115.2 68 76.5
Glyma.08G210900 Glycine max HOM05D004745 ORTHO05D005626 2.7e-24 114.8 68 76.5
HanXRQChr16g0500481 Helianthus annuus HOM05D004745 ORTHO05D005626 2.7e-24 114.8 68 76.5
PGSC0003DMG400029962 Solanum tuberosum HOM05D004745 ORTHO05D005626 2.7e-24 114.8 68 77.9
arahy.Tifrunner.gnm1.ann1.EYL5YU Arachis hypogaea HOM05D004745 ORTHO05D005626 3.6e-24 114.4 68 76.5
arahy.Tifrunner.gnm1.ann1.Q3QYYY Arachis hypogaea HOM05D004745 ORTHO05D005626 3.6e-24 114.4 68 76.5
EL10Ac9g21930 Beta vulgaris HOM05D004745 ORTHO05D005626 3.6e-24 114.4 68 77.9
Lj3g0003662 Lotus japonicus HOM05D004745 ORTHO05D005626 3.6e-24 114.4 68 76.5
Lalb_Chr01g0012481 Lupinus albus HOM05D004745 ORTHO05D005626 3.6e-24 114.4 67 76.1
arahy.Tifrunner.gnm1.ann1.1TA14L Arachis hypogaea HOM05D004745 ORTHO05D005626 4.7e-24 114.0 68 73.5
arahy.Tifrunner.gnm1.ann1.8B3Q96 Arachis hypogaea HOM05D004745 ORTHO05D005626 4.7e-24 114.0 68 73.5
HanXRQChr10g0303121 Helianthus annuus HOM05D004745 ORTHO05D005626 4.7e-24 114.0 68 79.4
Lsat_1_v5_gn_4_105820 Lactuca sativa HOM05D004745 ORTHO05D005626 4.7e-24 114.0 68 75.0
ECA233G1751 Erigeron canadensis HOM05D004745 ORTHO05D005626 6.1e-24 113.6 68 75.0
ECA234G1027 Erigeron canadensis HOM05D004745 ORTHO05D005626 6.1e-24 113.6 68 73.5
Lj3g0018837 Lotus japonicus HOM05D004745 ORTHO05D005626 6.1e-24 113.6 68 75.0
Lalb_Chr14g0373711 Lupinus albus HOM05D004745 ORTHO05D005626 6.1e-24 113.6 60 80.0
Medtr2g103430 Medicago truncatula HOM05D004745 ORTHO05D005626 6.1e-24 113.6 68 73.5
Phvul.010G154200 Phaseolus vulgaris HOM05D004745 ORTHO05D005626 6.1e-24 113.6 68 75.0
Psat5g301200 Pisum sativum HOM05D004745 ORTHO05D005626 7.9e-24 113.2 68 73.5
BcaC05g25486 Brassica carinata HOM05D004745 ORTHO05D005626 1.0e-23 112.8 67 77.6
A06p11430 Brassica napus HOM05D004745 ORTHO05D005626 1.0e-23 112.8 67 77.6
C05p13550 Brassica napus HOM05D004745 ORTHO05D005626 1.0e-23 112.8 67 77.6
BolC5t30092H Brassica oleracea HOM05D004745 ORTHO05D005626 1.0e-23 112.8 67 77.6
BraA06t24321Z Brassica rapa HOM05D004745 ORTHO05D005626 1.0e-23 112.8 67 77.6
ECA238G2546 Erigeron canadensis HOM05D004745 ORTHO05D005626 1.0e-23 112.8 68 76.5
BcaB03g14542 Brassica carinata HOM05D004745 ORTHO05D005626 1.4e-23 112.5 68 76.5
Sed0026286 Sechium edule HOM05D004745 ORTHO05D005626 1.8e-23 112.1 68 76.5
Peaxi162Scf00320g00620 Petunia axillaris HOM05D004745 ORTHO05D005626 3.0e-23 111.3 68 76.5
TWI18G0786 Tripterygium wilfordii HOM05D004745 ORTHO05D005626 3.0e-23 111.3 68 73.5
HPP92_024132 Vanilla planifolia HOM05D004745 ORTHO05D005626 3.0e-23 111.3 68 69.1
Thhalv10008467m.g Eutrema salsugineum HOM05D004745 ORTHO05D005626 3.9e-23 110.9 68 75.0
unitig_747.g21294 Utricularia gibba HOM05D004745 ORTHO05D005626 3.9e-23 110.9 68 72.1
AL1G27500 Arabidopsis lyrata HOM05D004745 ORTHO05D005626 5.1e-23 110.5 67 76.1
AT1G15390 Arabidopsis thaliana HOM05D004745 ORTHO05D005626 5.1e-23 110.5 67 76.1
BcaC05g25480 Brassica carinata HOM05D004745 ORTHO05D005626 5.1e-23 110.5 68 75.0
Carub.0001s1517 Capsella rubella HOM05D004745 ORTHO05D005626 5.1e-23 110.5 67 76.1
CARHR015930 Cardamine hirsuta HOM05D004745 ORTHO05D005626 5.1e-23 110.5 67 76.1
Lsat_1_v5_gn_5_132160 Lactuca sativa HOM05D004745 ORTHO05D005626 6.7e-23 110.2 68 77.9
Sp1g13740 Schrenkiella parvula HOM05D004745 ORTHO05D005626 6.7e-23 110.2 68 75.0
A09p61430 Brassica napus HOM05D004745 ORTHO05D005626 8.8e-23 109.8 68 75.0
Glyma.15G009700 Glycine max HOM05D004745 ORTHO05D005626 8.8e-23 109.8 68 73.5
BraA09t41514Z Brassica rapa HOM05D004745 ORTHO05D005626 1.1e-22 109.4 68 75.0
TPR.G37193 Trifolium pratense HOM05D004745 ORTHO05D005626 1.1e-22 109.4 68 70.6
BcaC07g41503 Brassica carinata HOM05D004745 ORTHO05D005626 1.5e-22 109.0 68 75.0
C08p44990 Brassica napus HOM05D004745 ORTHO05D005626 1.5e-22 109.0 68 75.0
BolC8t52045H Brassica oleracea HOM05D004745 ORTHO05D005626 1.5e-22 109.0 68 75.0
VMungo1080G0321 Vigna mungo HOM05D004745 ORTHO05D005626 2.0e-22 108.6 68 70.6
Aa31LG7G150 Aethionema arabicum HOM05D004745 ORTHO05D005626 3.3e-22 107.8 68 72.1
Medtr2g103420 Medicago truncatula HOM05D004745 ORTHO05D005626 5.7e-22 107.1 60 76.7
Phvul.005G175900 Phaseolus vulgaris HOM05D004745 ORTHO05D005626 5.7e-22 107.1 68 70.6
THA.LOC104808227 Tarenaya hassleriana HOM05D004745 ORTHO05D005626 2.2e-21 105.1 68 70.6
Mapoly0061s0037 Marchantia polymorpha HOM05D004745 ORTHO05D005626 2.8e-21 104.8 68 72.1
Mapoly0285s0003 Marchantia polymorpha HOM05D004745 ORTHO05D005626 2.8e-21 104.8 68 72.1
HanXRQChr05g0131081 Helianthus annuus HOM05D004745 ORTHO05D005626 1.4e-20 102.4 65 73.8
CBR_g8594 Chara braunii HOM05D004745 ORTHO05D005626 6.9e-20 100.1 68 66.2
Pp3c2_27110 Physcomitrium patens HOM05D004745 ORTHO05D005626 7.7e-19 96.7 68 66.2
ECA238G0294 Erigeron canadensis HOM05D004745 ORTHO05D005626 2.9e-18 94.7 48 85.4
ECA248G1182 Erigeron canadensis HOM05D004745 ORTHO05D005626 2.9e-18 94.7 48 85.4
Pp3c1_9250 Physcomitrium patens HOM05D004745 ORTHO05D005626 6.5e-18 93.6 68 63.2
PRCOL_00006240 Prasinoderma coloniale HOM05D004745 ORTHO05D005626 8.8e-15 83.2 63 60.3
MCO13G487 Micromonas commoda HOM05D004745 ORTHO05D005626 1.4e-12 75.9 58 60.3
TPR.G16954 Trifolium pratense HOM05D000581 ORTHO05D000412 1.4e-12 75.9 41 78.0
Cre03.g172100 Chlamydomonas reinhardtii HOM05D004745 ORTHO05D005626 1.3e-10 69.3 59 47.5
CBR_g10865 Chara braunii HOM05D006109 ORTHO05D007647 9.4e-09 63.2 55 47.3
CBR_g11073 Chara braunii HOM05D006109 ORTHO05D007647 4.7e-08 60.8 55 45.5
SMO347G0147 Selaginella moellendorffii HOM05D006109 ORTHO05D007647 6.1e-08 60.5 55 43.6
Cre01.g039650 Chlamydomonas reinhardtii HOM05D006109 ORTHO05D007647 2.3e-07 58.5 56 48.2
Cre01.g039750 Chlamydomonas reinhardtii HOM05D006109 ORTHO05D007647 2.3e-07 58.5 56 48.2
Mapoly0058s0077 Marchantia polymorpha HOM05D006109 ORTHO05D007647 2.3e-07 58.5 55 47.3
Pp3c24_20 Physcomitrium patens HOM05D006109 ORTHO05D007647 2.6e-06 55.1 55 43.6
MCO01G286 Micromonas commoda HOM05D006109 ORTHO05D007647 5.7e-06 53.9 63 42.9
Pp3s46_10 Physcomitrium patens HOM05D001724 ORTHO05D007284 5.7e-06 53.9 65 35.4


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