Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C589T7 Lonicera japonica HOM05D006382 ORTHO05D008938 2.3e-306 1054.7 507 100.0
Dinv43864 Davidia involucrata HOM05D006382 ORTHO05D008938 1.1e-226 790.0 505 75.4
Cfa003871 Carpinus fangiana HOM05D006382 ORTHO05D008938 7.1e-223 777.3 498 75.1
TWI59G0052 Tripterygium wilfordii HOM05D006382 ORTHO05D008938 7.8e-222 773.9 498 74.5
Actinidia20164 Actinidia chinensis HOM05D006382 ORTHO05D008938 1.3e-221 773.1 499 74.9
Hma1.2p1_0335F.1_g128860 Hydrangea macrophylla HOM05D006382 ORTHO05D008938 2.5e-220 768.8 505 73.7
Atru.chr5.564 Acer truncatum HOM05D006382 ORTHO05D008938 5.6e-220 767.7 503 72.4
CiPaw.01G067600 Carya illinoinensis HOM05D006382 ORTHO05D008938 1.2e-219 766.5 498 74.9
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.6e-219 766.1 509 71.9
RcHm_v2.0_Chr1g0357731 Rosa chinensis HOM05D006382 ORTHO05D008938 6.2e-219 764.2 509 71.5
CSS0031254 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 8.1e-219 763.8 528 71.0
Oeu063675.1 Olea europaea HOM05D006382 ORTHO05D008938 1.1e-218 763.5 510 72.7
FAN06G2792 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.8e-218 762.7 509 71.7
vmacro13226 Vaccinium macrocarpon HOM05D006382 ORTHO05D008938 1.5e-217 759.6 514 71.4
HanXRQChr17g0562131 Helianthus annuus HOM05D006382 ORTHO05D008938 4.4e-217 758.1 506 72.1
QL04p055600 Quercus lobata HOM05D006382 ORTHO05D008938 5.8e-217 757.7 497 72.8
Duzib133G1372 Durio zibethinus HOM05D006382 ORTHO05D008938 2.2e-216 755.7 498 72.7
Gohir.A11G092400 Gossypium hirsutum HOM05D006382 ORTHO05D008938 2.2e-216 755.7 499 72.3
SalBow3G4256 Salvia bowleyana HOM05D006382 ORTHO05D008938 2.9e-216 755.4 509 71.1
MSTRG.17299 Avicennia marina HOM05D006382 ORTHO05D008938 6.4e-216 754.2 497 72.4
Potri.002G164700 Populus trichocarpa HOM05D006382 ORTHO05D008938 1.1e-215 753.4 498 72.1
CSS0000318 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 1.4e-215 753.1 521 71.2
SGA_v2.0_scaffold4G02278 Striga asiatica HOM05D006382 ORTHO05D008938 1.4e-215 753.1 506 71.7
Atru.BG.55.p Acer truncatum HOM05D006382 ORTHO05D008938 4.2e-215 751.5 496 72.8
Lj1g0001840 Lotus japonicus HOM05D006382 ORTHO05D008938 4.2e-215 751.5 502 71.7
GSVIVG01026968001 Vitis vinifera HOM05D006382 ORTHO05D008938 4.2e-215 751.5 505 71.5
FAN01G1899 Fragaria x ananassa HOM05D006382 ORTHO05D008938 5.4e-215 751.1 507 71.0
Nitab4.5_0000915g0130 Nicotiana tabacum HOM05D006382 ORTHO05D008938 5.4e-215 751.1 507 71.4
FvH4_7g15410 Fragaria vesca HOM05D006382 ORTHO05D008938 1.6e-214 749.6 509 70.7
Thecc.01G352300 Theobroma cacao HOM05D006382 ORTHO05D008938 2.1e-214 749.2 498 71.7
Rhsim07G0010300 Rhododendron simsii HOM05D006382 ORTHO05D008938 1.3e-213 746.5 498 72.3
MD01G1071500 Malus domestica HOM05D006382 ORTHO05D008938 1.7e-213 746.1 506 70.0
Gorai.007G103500 Gossypium raimondii HOM05D006382 ORTHO05D008938 6.6e-213 744.2 499 71.5
Prupe.2G177700 Prunus persica HOM05D006382 ORTHO05D008938 8.7e-213 743.8 506 70.0
Peaxi162Scf00020g01516 Petunia axillaris HOM05D006382 ORTHO05D008938 1.1e-212 743.4 499 71.7
Sabra02G0146800 Salix brachista HOM05D006382 ORTHO05D008938 5.6e-212 741.1 498 70.1
Sopen01g038910 Solanum pennellii HOM05D006382 ORTHO05D008938 7.3e-212 740.7 499 71.5
PGSC0003DMG400000065 Solanum tuberosum HOM05D006382 ORTHO05D008938 7.3e-212 740.7 499 71.5
Solyc01g095120.3 Solanum lycopersicum HOM05D006382 ORTHO05D008938 1.3e-211 740.0 499 71.3
Lalb_Chr19g0126881 Lupinus albus HOM05D006382 ORTHO05D008938 1.6e-211 739.6 498 70.1
Cpa.g.sc11.72 Carica papaya HOM05D006382 ORTHO05D008938 2.8e-211 738.8 499 69.9
MELO3C006077.2 Cucumis melo HOM05D006382 ORTHO05D008938 4.8e-211 738.0 497 70.8
Aqoxy7G00230 Aquilegia oxysepala HOM05D006382 ORTHO05D008938 6.2e-211 737.6 500 71.0
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 4.0e-210 734.9 478 74.3
Sed0009049 Sechium edule HOM05D006382 ORTHO05D008938 6.9e-210 734.2 509 69.0
Haze_15566 Corylus avellana HOM05D006382 ORTHO05D008938 2.0e-209 732.6 525 68.8
Nitab4.5_0010695g0050 Nicotiana tabacum HOM05D006382 ORTHO05D008938 3.4e-209 731.9 524 68.9
ECA234G1133 Erigeron canadensis HOM05D006382 ORTHO05D008938 7.6e-209 730.7 496 71.4
VMungo1383G3370 Vigna mungo HOM05D006382 ORTHO05D008938 7.6e-209 730.7 498 69.3
Eucgr.D02325 Eucalyptus grandis HOM05D006382 ORTHO05D008938 1.3e-208 729.9 502 69.5
Phvul.008G058200 Phaseolus vulgaris HOM05D006382 ORTHO05D008938 1.9e-207 726.1 499 69.1
ClCG05G001220 Citrullus lanatus HOM05D006382 ORTHO05D008938 4.2e-207 724.9 497 69.6
CsaV3_3G008570 Cucumis sativus L. HOM05D006382 ORTHO05D008938 7.1e-207 724.2 497 69.6
Nn1g01689 Nelumbo nucifera HOM05D006382 ORTHO05D008938 1.2e-206 723.4 500 70.0
Ciclev10019743m.g Citrus clementina HOM05D006382 ORTHO05D008938 3.5e-206 721.8 506 69.4
Carub.0005s2823 Capsella rubella HOM05D006382 ORTHO05D008938 7.9e-206 720.7 499 67.9
Medtr7g079030 Medicago truncatula HOM05D006382 ORTHO05D008938 1.1e-204 716.8 509 67.8
THA.LOC104827604 Tarenaya hassleriana HOM05D006382 ORTHO05D008938 1.5e-204 716.5 498 68.1
CANSAT56G1207 Cannabis sativa HOM05D006382 ORTHO05D008938 1.9e-204 716.1 506 67.6
Sp5g01870 Schrenkiella parvula HOM05D006382 ORTHO05D008938 1.9e-204 716.1 498 68.9
DCAR_005361 Daucus carota HOM05D006382 ORTHO05D008938 2.5e-204 715.7 498 67.9
AL5G43900 Arabidopsis lyrata HOM05D006382 ORTHO05D008938 9.6e-204 713.8 498 67.9
PSO266G0056 Papaver somniferum HOM05D006382 ORTHO05D008938 9.6e-204 713.8 514 68.1
AUR62004414 Chenopodium quinoa HOM05D006382 ORTHO05D008938 1.3e-203 713.4 499 67.9
BcaC08g45134 Brassica carinata HOM05D006382 ORTHO05D008938 1.6e-203 713.0 498 68.5
C06p27550 Brassica napus HOM05D006382 ORTHO05D008938 2.1e-203 712.6 498 68.7
CARHR171860 Cardamine hirsuta HOM05D006382 ORTHO05D008938 2.8e-203 712.2 499 67.5
Glyma.18G238400 Glycine max HOM05D006382 ORTHO05D008938 2.8e-203 712.2 498 67.9
A07p25560 Brassica napus HOM05D006382 ORTHO05D008938 4.8e-203 711.4 503 68.0
PSO384G0256 Papaver somniferum HOM05D006382 ORTHO05D008938 4.8e-203 711.4 519 67.1
FAN06G0271 Fragaria x ananassa HOM05D006382 ORTHO05D008938 6.2e-203 711.1 509 67.4
BolC6t37923H Brassica oleracea HOM05D006382 ORTHO05D008938 8.1e-203 710.7 498 68.5
BraA07t30197Z Brassica rapa HOM05D006382 ORTHO05D008938 1.1e-202 710.3 503 67.6
AT3G61540 Arabidopsis thaliana HOM05D006382 ORTHO05D008938 1.4e-202 709.9 499 68.3
EL10Ac1g00353 Beta vulgaris HOM05D006382 ORTHO05D008938 4.0e-202 708.4 499 67.9
Thhalv10005890m.g Eutrema salsugineum HOM05D006382 ORTHO05D008938 5.3e-202 708.0 499 67.5
Glyma.09G254600 Glycine max HOM05D006382 ORTHO05D008938 6.9e-202 707.6 498 67.9
arahy.Tifrunner.gnm1.ann1.FF5BCH Arachis hypogaea HOM05D006382 ORTHO05D008938 4.5e-201 704.9 504 67.7
arahy.Tifrunner.gnm1.ann1.Z348XU Arachis hypogaea HOM05D006382 ORTHO05D008938 5.8e-201 704.5 504 67.7
BcaB02g07372 Brassica carinata HOM05D006382 ORTHO05D008938 1.3e-200 703.4 503 67.2
Psat3g105480 Pisum sativum HOM05D006382 ORTHO05D008938 2.2e-200 702.6 498 67.5
TPR.G35789 Trifolium pratense HOM05D006382 ORTHO05D008938 2.2e-200 702.6 498 68.1
Sc01g0003200 Simmondsia chinensis HOM05D006382 ORTHO05D008938 6.4e-200 701.0 508 65.6
Cc02_g38570 Coffea canephora HOM05D006382 ORTHO05D008938 1.4e-199 699.9 501 68.3
MBI06_g33533_MAGBIO Magnolia biondii HOM05D006382 ORTHO05D008938 1.4e-199 699.9 498 67.3
CDE10G0280 Ceratophyllum demersum HOM05D006382 ORTHO05D008938 2.5e-199 699.1 497 66.0
Lsat_1_v5_gn_4_35160 Lactuca sativa HOM05D006382 ORTHO05D008938 2.5e-199 699.1 498 68.5
Ca_07943_v3 Cicer arietinum L. HOM05D006382 ORTHO05D008938 4.2e-199 698.4 486 68.3
ATR0721G029 Amborella trichopoda HOM05D006382 ORTHO05D008938 2.8e-195 685.6 498 67.5
HPP92_008800 Vanilla planifolia HOM05D006382 ORTHO05D008938 8.2e-195 684.1 497 64.8
CANSAT56G3955 Cannabis sativa HOM05D006382 ORTHO05D008938 1.1e-186 657.1 504 64.3
Aa31LG10G15440 Aethionema arabicum HOM05D006382 ORTHO05D008938 6.5e-184 647.9 455 68.6
AUR62022620 Chenopodium quinoa HOM05D006382 ORTHO05D008938 2.5e-183 646.0 510 63.1
unitig_747.g21323 Utricularia gibba HOM05D000887 ORTHO05D000908 1.7e-179 633.3 514 61.7
Ah.05g180140 Amaranthus hybridus HOM05D006382 ORTHO05D008938 1.1e-178 630.6 471 64.5
COL.COLO4_12779 Corchorus olitorius HOM05D006382 ORTHO05D008938 3.8e-176 622.1 498 63.1
Pp3c20_22770 Physcomitrium patens HOM05D006382 ORTHO05D008938 3.8e-176 622.1 502 59.4
CAN.G78.131 Capsicum annuum HOM05D006382 ORTHO05D008938 1.5e-172 610.1 363 79.3
SMO134G0292 Selaginella moellendorffii HOM05D006382 ORTHO05D008938 7.2e-167 591.3 501 58.1
Mapoly0179s0013 Marchantia polymorpha HOM05D006382 ORTHO05D008938 8.0e-166 587.8 500 57.6
Gohir.D11G097200 Gossypium hirsutum HOM05D006382 ORTHO05D008938 4.1e-162 575.5 407 68.3
Migut.B01800 Erythranthe guttata HOM05D006382 ORTHO05D008938 3.5e-161 572.4 507 57.6
Manes.05G029200 Manihot esculenta HOM05D006382 ORTHO05D008938 3.2e-159 565.8 411 66.7
TAR629G1903 Trochodendron aralioides HOM05D006382 ORTHO05D008938 1.4e-130 470.7 338 68.0
Oeu063676.1 Olea europaea HOM05D006382 ORTHO05D008938 1.9e-127 460.3 529 49.1
Cre03.g193700 Chlamydomonas reinhardtii HOM05D006382 ORTHO05D008938 4.3e-119 432.6 498 44.6
Potri.014G090601 Populus trichocarpa HOM05D006382 ORTHO05D008938 6.4e-115 418.7 305 68.9
MCO14G065 Micromonas commoda HOM05D006382 ORTHO05D008938 6.2e-110 402.1 518 43.4
Zm00001eb375690 Zea mays HOM05D006382 ORTHO05D008938 9.0e-101 371.7 316 60.1
PRCOL_00004635 Prasinoderma coloniale HOM05D006382 ORTHO05D008938 1.1e-95 354.8 525 40.6
Cfa025852 Carpinus fangiana HOM05D006382 ORTHO05D008938 7.6e-76 288.9 404 41.1
SMO139G0016 Selaginella moellendorffii HOM05D006382 ORTHO05D376983 1.1e-42 178.7 226 41.6
Os06g0163600 Oryza sativa ssp. japonica HOM05D006382 ORTHO05D008938 6.8e-40 169.5 100 76.0
Hma1.2p1_0036F.1_g022810 Hydrangea macrophylla HOM05D006382 ORTHO05D228417 3.5e-36 157.1 96 75.0
Hma1.2p1_0036F.1_g022815 Hydrangea macrophylla HOM05D006382 ORTHO05D228242 3.5e-36 157.1 96 75.0
Hma1.2p1_0515F.1_g170355 Hydrangea macrophylla HOM05D006382 ORTHO05D228454 3.5e-36 157.1 96 75.0
Hma1.2p1_1019F.1_g248455 Hydrangea macrophylla HOM05D006382 ORTHO05D228422 3.5e-36 157.1 96 75.0
SMO165G0168 Selaginella moellendorffii HOM05D006382 ORTHO05D374182 3.1e-29 134.0 277 33.2
BolC4t24936H Brassica oleracea HOM05D006382 ORTHO05D024383 8.0e-25 119.4 78 65.4
C04p33670 Brassica napus HOM05D006382 ORTHO05D024383 1.1e-18 99.0 63 68.3
BcaB04g18088 Brassica carinata HOM05D006382 ORTHO05D024383 4.6e-12 77.0 43 86.0
CsaV3_3G008600 Cucumis sativus L. HOM05D006382 ORTHO05D172594 4.0e-08 63.9 40 72.5
Ah.05g180150 Amaranthus hybridus HOM05D006382 ORTHO05D060446 5.2e-08 63.5 48 62.5
Actinidia17930 Actinidia chinensis HOM05D006382 ORTHO05D008938 3.4e-07 60.8 41 73.2


User provided reference genes

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