Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 4.0e-173 611.3 304 100.0
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 4.8e-142 508.1 343 76.7
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 9.4e-138 493.8 343 76.1
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 2.3e-136 489.2 343 72.9
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 2.3e-136 489.2 339 74.3
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 8.8e-136 487.3 338 74.3
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 1.5e-135 486.5 340 75.9
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.7e-134 483.0 343 74.3
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 3.1e-133 478.8 315 76.8
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 4.1e-133 478.4 330 74.2
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 4.1e-133 478.4 339 74.3
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 5.9e-132 474.6 331 74.3
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 7.7e-132 474.2 337 71.5
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 1.0e-131 473.8 331 74.0
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 5.0e-131 471.5 344 73.3
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 5.0e-131 471.5 327 75.5
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 4.2e-130 468.4 339 72.0
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 4.2e-130 468.4 343 71.1
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 1.2e-129 466.8 339 72.0
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 2.1e-129 466.1 270 86.3
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 2.7e-129 465.7 343 70.6
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 2.7e-129 465.7 330 73.9
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 2.7e-129 465.7 332 72.9
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 4.7e-129 464.9 341 71.0
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 1.0e-128 463.8 385 66.2
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 1.8e-128 463.0 341 70.4
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 2.3e-128 462.6 343 70.6
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 2.3e-128 462.6 327 73.4
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 3.9e-128 461.8 344 71.5
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 8.8e-128 460.7 384 66.1
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 2.0e-127 459.5 341 70.1
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 2.6e-127 459.1 338 70.7
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 3.3e-127 458.8 323 73.7
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 5.7e-127 458.0 331 71.3
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 1.3e-126 456.8 332 71.1
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 1.3e-126 456.8 327 73.4
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 2.2e-126 456.1 323 73.4
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 3.7e-126 455.3 353 68.6
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 1.4e-125 453.4 263 84.8
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 1.4e-125 453.4 345 69.6
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 1.4e-125 453.4 332 71.1
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 1.8e-125 453.0 324 73.1
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 3.1e-125 452.2 375 64.8
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 5.3e-125 451.4 303 75.9
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 7.0e-125 451.1 331 71.3
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.2e-124 450.3 353 68.0
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 1.2e-124 450.3 338 70.7
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 1.6e-124 449.9 320 72.2
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 1.6e-124 449.9 325 71.4
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 3.5e-124 448.7 345 69.3
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 3.5e-124 448.7 331 70.7
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 4.5e-124 448.4 267 84.3
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 5.9e-124 448.0 348 67.8
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 1.0e-123 447.2 338 70.1
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.0e-123 447.2 353 67.4
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 1.0e-123 447.2 323 70.9
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 1.3e-123 446.8 338 69.8
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 1.3e-123 446.8 267 84.3
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 1.7e-123 446.4 344 68.3
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 2.9e-123 445.7 348 68.4
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 6.5e-123 444.5 331 70.4
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 2.5e-122 442.6 328 70.7
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 5.5e-122 441.4 343 68.2
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 7.2e-122 441.0 343 68.2
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 7.2e-122 441.0 331 70.4
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 9.4e-122 440.7 343 66.8
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 1.6e-121 439.9 339 69.0
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 1.6e-121 439.9 339 69.0
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 2.1e-121 439.5 311 73.0
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.7e-121 438.3 379 63.3
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 4.7e-121 438.3 257 84.4
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 1.4e-120 436.8 330 69.1
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 2.3e-120 436.0 335 68.1
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 3.0e-120 435.6 261 83.1
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 6.8e-120 434.5 376 63.3
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 1.2e-119 433.7 327 69.1
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 3.4e-119 432.2 324 67.9
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 4.4e-119 431.8 317 70.7
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 1.3e-118 430.3 282 78.7
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 2.8e-118 429.1 384 59.9
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 3.7e-118 428.7 345 66.1
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 1.8e-117 426.4 268 83.6
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 9.1e-117 424.1 335 67.5
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 2.0e-116 422.9 290 74.1
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 2.0e-116 422.9 335 67.2
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 1.0e-115 420.6 294 73.1
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 1.7e-115 419.9 331 66.8
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 3.8e-115 418.7 356 63.5
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 3.8e-115 418.7 356 63.5
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 5.0e-115 418.3 285 76.5
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 3.2e-114 415.6 327 67.9
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 1.2e-113 413.7 267 79.0
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 8.0e-113 411.0 357 63.3
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 1.8e-112 409.8 331 66.5
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 6.8e-112 407.9 280 76.8
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 5.7e-111 404.8 286 73.4
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 1.7e-110 403.3 292 71.9
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 4.8e-110 401.7 234 87.2
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 5.4e-109 398.3 334 64.4
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 1.7e-107 393.3 314 64.6
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 1.4e-104 383.6 267 74.5
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 5.7e-103 378.3 266 71.8
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 5.9e-100 368.2 263 72.6
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 7.0e-93 344.7 303 59.7
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 1.0e-91 340.9 314 54.5
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 9.5e-90 334.3 321 54.2
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 1.4e-88 330.5 267 68.2
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 6.8e-88 328.2 232 68.1
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 4.9e-86 322.0 318 51.9
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 1.3e-83 313.9 229 71.2
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 5.1e-83 312.0 292 57.5
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 6.6e-83 311.6 318 51.6
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 6.4e-78 295.0 261 61.7
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 5.1e-75 285.4 314 46.8
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 1.5e-71 273.9 236 61.4
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 2.1e-65 253.4 183 71.6
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 6.0e-60 235.3 151 80.8
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 2.5e-58 229.9 182 67.0
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 1.5e-55 220.7 364 36.8
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 5.8e-55 218.8 143 76.2
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 3.4e-47 193.0 129 72.9
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 2.4e-40 170.2 248 39.9
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 6.7e-35 152.1 110 65.5
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 6.3e-33 145.6 97 76.3
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 1.1e-24 118.2 221 35.3
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 2.7e-20 103.6 97 54.6
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 6.3e-17 92.4 71 66.2
Phvul.008G046701 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 9.4e-13 78.6 51 82.4


User provided reference genes

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