Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C555G1 Lonicera japonica HOM05D006344 ORTHO05D007744 2.0e-152 542.3 258 100.0
CSS0047635 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 8.3e-127 457.2 256 83.2
CSS0005629 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 1.6e-125 453.0 256 82.4
Dinv44052 Davidia involucrata HOM05D006344 ORTHO05D007744 2.7e-125 452.2 257 81.3
ECA234G3853 Erigeron canadensis HOM05D006344 ORTHO05D007744 6.5e-124 447.6 256 80.9
Sc26g0001660 Simmondsia chinensis HOM05D006344 ORTHO05D007744 8.5e-124 447.2 255 81.2
Cfa011061 Carpinus fangiana HOM05D006344 ORTHO05D007744 1.0e-121 440.3 255 80.0
Haze_02860 Corylus avellana HOM05D006344 ORTHO05D007744 1.8e-121 439.5 255 79.2
Potri.002G138600 Populus trichocarpa HOM05D006344 ORTHO05D007744 2.3e-121 439.1 257 79.4
Prupe.2G133500 Prunus persica HOM05D006344 ORTHO05D007744 3.0e-121 438.7 259 79.9
QL04p029920 Quercus lobata HOM05D006344 ORTHO05D007744 4.0e-121 438.3 255 78.4
HanXRQChr17g0562521 Helianthus annuus HOM05D006344 ORTHO05D007744 1.5e-120 436.4 255 78.4
Thecc.01G396400 Theobroma cacao HOM05D006344 ORTHO05D007744 2.6e-120 435.6 257 79.8
Glyma.12G152700 Glycine max HOM05D006344 ORTHO05D007744 5.7e-120 434.5 255 78.4
Sopen10g011810 Solanum pennellii HOM05D006344 ORTHO05D007744 7.5e-120 434.1 256 78.1
EL10Ac1g00751 Beta vulgaris HOM05D006344 ORTHO05D007744 1.3e-119 433.3 254 77.2
Hund17097 Selenicereus undatus HOM05D006344 ORTHO05D007744 1.3e-119 433.3 257 77.4
MSTRG.20684 Avicennia marina HOM05D006344 ORTHO05D007744 2.2e-119 432.6 250 80.0
GSVIVG01018294001 Vitis vinifera HOM05D006344 ORTHO05D007744 2.8e-119 432.2 255 78.0
MD07G1109900 Malus domestica HOM05D006344 ORTHO05D007744 3.7e-119 431.8 257 79.0
VMungo0331G0733 Vigna mungo HOM05D006344 ORTHO05D007744 4.9e-119 431.4 254 77.2
Nn1g00813 Nelumbo nucifera HOM05D006344 ORTHO05D007744 6.3e-119 431.0 252 79.8
TWI23G1150 Tripterygium wilfordii HOM05D006344 ORTHO05D007744 2.4e-118 429.1 257 78.6
DCAR_025059 Daucus carota HOM05D006344 ORTHO05D007744 4.1e-118 428.3 277 73.6
vmacro13505 Vaccinium macrocarpon HOM05D006344 ORTHO05D007744 4.1e-118 428.3 252 79.4
Migut.B01523 Erythranthe guttata HOM05D006344 ORTHO05D007744 5.4e-118 427.9 251 80.1
RcHm_v2.0_Chr1g0348081 Rosa chinensis HOM05D006344 ORTHO05D007744 1.2e-117 426.8 257 77.0
CANSAT25G2006 Cannabis sativa HOM05D006344 ORTHO05D007744 2.0e-117 426.0 256 77.0
FAN10G0415 Fragaria x ananassa HOM05D006344 ORTHO05D007744 2.7e-117 425.6 259 76.4
FAN10G1159 Fragaria x ananassa HOM05D006344 ORTHO05D007744 2.7e-117 425.6 259 76.8
Eucgr.D01222 Eucalyptus grandis HOM05D006344 ORTHO05D007744 3.5e-117 425.2 252 78.6
Lsat_1_v5_gn_4_39300 Lactuca sativa HOM05D006344 ORTHO05D007744 3.5e-117 425.2 255 76.9
arahy.Tifrunner.gnm1.ann1.7K9T15 Arachis hypogaea HOM05D006344 ORTHO05D007744 4.5e-117 424.9 256 76.2
Oeu011251.1 Olea europaea HOM05D006344 ORTHO05D007744 4.5e-117 424.9 292 69.9
arahy.Tifrunner.gnm1.ann1.6KIV37 Arachis hypogaea HOM05D006344 ORTHO05D007744 5.9e-117 424.5 256 76.2
COL.COLO4_12394 Corchorus olitorius HOM05D006344 ORTHO05D007744 5.9e-117 424.5 257 76.7
Lj3g0017960 Lotus japonicus HOM05D006344 ORTHO05D007744 5.9e-117 424.5 256 76.2
Manes.05G055800 Manihot esculenta HOM05D006344 ORTHO05D007744 5.9e-117 424.5 255 76.5
FvH4_7g10380 Fragaria vesca HOM05D006344 ORTHO05D007744 1.0e-116 423.7 259 76.4
FAN06G2435 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.0e-116 423.7 259 76.4
FAN06G3766 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.0e-116 423.7 259 76.4
Cc02_g25170 Coffea canephora HOM05D006344 ORTHO05D007744 1.7e-116 422.9 254 77.2
Aqoxy3G02683 Aquilegia oxysepala HOM05D006344 ORTHO05D007744 2.3e-116 422.5 255 76.1
AUR62013752 Chenopodium quinoa HOM05D006344 ORTHO05D007744 2.3e-116 422.5 255 75.3
SGA_v2.0_scaffold52G19234 Striga asiatica HOM05D006344 ORTHO05D007744 3.8e-116 421.8 252 77.4
Phvul.010G046700 Phaseolus vulgaris HOM05D006344 ORTHO05D007744 5.0e-116 421.4 255 76.1
Sabra02G0107400 Salix brachista HOM05D006344 ORTHO05D007744 5.0e-116 421.4 279 72.8
FAN01G1631 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.1e-115 420.2 259 75.7
Ciclev10019814m.g Citrus clementina HOM05D006344 ORTHO05D007744 1.5e-115 419.9 251 77.3
Medtr8g007155 Medicago truncatula HOM05D006344 ORTHO05D007744 1.5e-115 419.9 255 74.9
Ca_14805_v3 Cicer arietinum L. HOM05D006344 ORTHO05D007744 2.5e-115 419.1 256 75.0
SalBow8G3479 Salvia bowleyana HOM05D006344 ORTHO05D007744 7.2e-115 417.5 277 71.8
Duzib133G0621 Durio zibethinus HOM05D006344 ORTHO05D007744 1.2e-114 416.8 260 76.5
Glyma.06G240000 Glycine max HOM05D006344 ORTHO05D007744 1.6e-114 416.4 254 76.0
Lalb_Chr12g0210531 Lupinus albus HOM05D006344 ORTHO05D007744 1.6e-114 416.4 257 73.2
AUR62023399 Chenopodium quinoa HOM05D006344 ORTHO05D007744 2.1e-114 416.0 255 73.7
TAR375G1150 Trochodendron aralioides HOM05D006344 ORTHO05D007744 2.1e-114 416.0 252 77.0
Gorai.008G109500 Gossypium raimondii HOM05D006344 ORTHO05D007744 3.6e-114 415.2 256 76.6
MELO3C005945.2 Cucumis melo HOM05D006344 ORTHO05D007744 6.1e-114 414.5 256 75.0
Duzib138G0679 Durio zibethinus HOM05D006344 ORTHO05D007744 1.8e-113 412.9 267 74.9
Gohir.D12G100600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 3.0e-113 412.1 256 76.2
Gohir.A12G097600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 4.0e-113 411.8 256 76.2
THA.LOC104802498 Tarenaya hassleriana HOM05D006344 ORTHO05D007744 8.9e-113 410.6 253 75.1
TPR.G32142 Trifolium pratense HOM05D006344 ORTHO05D007744 4.4e-112 408.3 256 72.7
Psat4g223640 Pisum sativum HOM05D006344 ORTHO05D007744 1.3e-111 406.8 256 72.3
Rhsim07G0037100 Rhododendron simsii HOM05D006344 ORTHO05D007744 1.3e-111 406.8 241 78.4
unitig_0.g1343 Utricularia gibba HOM05D006344 ORTHO05D007744 2.2e-111 406.0 269 71.4
PSO782G2130 Papaver somniferum HOM05D006344 ORTHO05D007744 4.9e-111 404.8 257 73.5
FAN03G0097 Fragaria x ananassa HOM05D006344 ORTHO05D007744 4.1e-110 401.7 308 64.3
BcaB02g08857 Brassica carinata HOM05D006344 ORTHO05D007744 5.4e-110 401.4 259 71.4
BcaC02g12272 Brassica carinata HOM05D006344 ORTHO05D007744 5.4e-110 401.4 255 71.8
BolC4t22205H Brassica oleracea HOM05D006344 ORTHO05D007744 5.4e-110 401.4 255 71.8
Thhalv10001417m.g Eutrema salsugineum HOM05D006344 ORTHO05D007744 2.0e-109 399.4 256 72.3
A05p04940 Brassica napus HOM05D006344 ORTHO05D007744 5.9e-109 397.9 255 71.4
BraA05t19467Z Brassica rapa HOM05D006344 ORTHO05D007744 5.9e-109 397.9 255 71.4
Sp4g26830 Schrenkiella parvula HOM05D006344 ORTHO05D007744 5.9e-109 397.9 257 72.0
C04p05760 Brassica napus HOM05D006344 ORTHO05D007744 1.0e-108 397.1 255 71.0
CARHR139980 Cardamine hirsuta HOM05D006344 ORTHO05D007744 1.5e-107 393.3 254 71.7
AL4G43840 Arabidopsis lyrata HOM05D006344 ORTHO05D007744 1.6e-106 389.8 254 71.3
ATR0665G564 Amborella trichopoda HOM05D006344 ORTHO05D007744 2.8e-106 389.0 254 71.7
Carub.0004s2733 Capsella rubella HOM05D006344 ORTHO05D007744 2.8e-106 389.0 254 70.9
CiPaw.14G019800 Carya illinoinensis HOM05D006344 ORTHO05D007744 2.3e-105 386.0 230 77.8
Zm00001eb427880 Zea mays HOM05D006344 ORTHO05D007744 4.0e-105 385.2 250 70.4
AT2G44760 Arabidopsis thaliana HOM05D006344 ORTHO05D007744 5.2e-105 384.8 254 70.5
Nitab4.5_0000228g0070 Nicotiana tabacum HOM05D006344 ORTHO05D007744 7.5e-104 380.9 295 64.4
Aa31LG1G26310 Aethionema arabicum HOM05D006344 ORTHO05D007744 2.4e-102 375.9 290 63.1
Sed0012570 Sechium edule HOM05D006344 ORTHO05D007744 4.1e-102 375.2 254 69.7
Os04g0545200 Oryza sativa ssp. japonica HOM05D006344 ORTHO05D007744 7.8e-101 370.9 250 68.0
HPP92_012970 Vanilla planifolia HOM05D006344 ORTHO05D007744 1.1e-99 367.1 250 68.0
COL.COLO4_10415 Corchorus olitorius HOM05D006344 ORTHO05D007744 6.8e-97 357.8 263 66.5
Nitab4.5_0009461g0020 Nicotiana tabacum HOM05D006344 ORTHO05D007744 8.3e-95 350.9 255 68.2
Actinidia18353 Actinidia chinensis HOM05D006344 ORTHO05D007744 1.4e-94 350.1 257 67.7
ClCG05G000130 Citrullus lanatus HOM05D006344 ORTHO05D007744 9.2e-94 347.4 256 66.0
Atru.chr5.116 Acer truncatum HOM05D006344 ORTHO05D007744 5.1e-92 341.7 238 68.9
CDE06G1994 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 1.5e-91 340.1 250 66.0
PGR004G1920 Punica granatum HOM05D006344 ORTHO05D007744 3.3e-91 339.0 256 64.5
CsaV3_3G007240 Cucumis sativus L. HOM05D006344 ORTHO05D007744 2.8e-90 335.9 451 42.6
Cpa.g.sc22.25 Carica papaya HOM05D006344 ORTHO05D007744 5.8e-88 328.2 255 63.5
Peaxi162Scf00103g00911 Petunia axillaris HOM05D006344 ORTHO05D007744 2.7e-85 319.3 191 77.0
Solyc10g037890.3 Solanum lycopersicum HOM05D006344 ORTHO05D007744 1.4e-78 297.0 180 76.1
SEGI_37248 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 1.2e-69 267.3 224 56.2
PGSC0003DMG400003447 Solanum tuberosum HOM05D006344 ORTHO05D007744 9.6e-67 257.7 160 73.8
Pp3c5_3810 Physcomitrium patens HOM05D006344 ORTHO05D007744 3.5e-61 239.2 247 51.0
AagrBONN_evm.TU.Sc2ySwM_117.1538 Anthoceros agrestis HOM05D006344 ORTHO05D007744 9.3e-54 214.5 246 44.7
Mapoly0089s0048 Marchantia polymorpha HOM05D006344 ORTHO05D007744 2.1e-53 213.4 245 46.5
SMO340G0133 Selaginella moellendorffii HOM05D002542 ORTHO05D007744 2.2e-39 166.8 217 40.6
SMO356G0573 Selaginella moellendorffii HOM05D002542 ORTHO05D005078 3.5e-24 116.3 130 44.6
HanXRQChr09g0257941 Helianthus annuus HOM05D006344 ORTHO05D007744 5.9e-24 115.5 64 81.2
Solyc10g037900.1 Solanum lycopersicum HOM05D006344 ORTHO05D007744 5.9e-24 115.5 65 81.5
PGSC0003DMG400026373 Solanum tuberosum HOM05D006344 ORTHO05D007744 7.7e-24 115.2 65 80.0
Peaxi162Scf00103g00912 Petunia axillaris HOM05D006344 ORTHO05D007744 1.1e-22 111.3 65 76.9
Actinidia26517 Actinidia chinensis HOM05D006344 ORTHO05D007744 1.9e-22 110.5 65 72.3
CAN.G768.2 Capsicum annuum HOM05D006344 ORTHO05D007744 2.7e-21 106.7 61 80.3
Peaxi162Scf00562g00069 Petunia axillaris HOM05D006344 ORTHO05D007744 6.7e-20 102.1 135 42.2
CDE06G0422 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 1.1e-17 94.7 58 67.2
CBR_g48168 Chara braunii HOM05D006344 ORTHO05D007744 1.7e-15 87.4 154 34.4
Cre16.g684900 Chlamydomonas reinhardtii HOM05D006344 ORTHO05D007744 1.3e-10 71.2 173 30.1
BcaB08g35012 Brassica carinata HOM05D006344 ORTHO05D007744 3.7e-10 69.7 42 69.0
HanXRQChr01g0015371 Helianthus annuus HOM05D000263 ORTHO05D000213 3.5e-08 63.2 41 65.9


User provided reference genes

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