Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C550T12 Lonicera japonica HOM05D007595 ORTHO05D009570 5.5e-211 738.4 767 100.0
Dinv44032 Davidia involucrata HOM05D007595 ORTHO05D009570 3.2e-78 297.4 669 42.9
Oeu004640.1 Olea europaea HOM05D007595 ORTHO05D009570 1.8e-60 238.4 628 47.8
Peaxi162Scf00793g00032 Petunia axillaris HOM05D007595 ORTHO05D009570 1.2e-59 235.7 170 66.5
CAN.G756.22 Capsicum annuum HOM05D007595 ORTHO05D009570 5.8e-59 233.4 170 64.7
CiPaw.13G022600 Carya illinoinensis HOM05D007595 ORTHO05D009570 9.8e-59 232.6 170 64.1
Sopen01g035520 Solanum pennellii HOM05D007595 ORTHO05D009570 9.8e-59 232.6 170 64.1
Atru.chr5.81 Acer truncatum HOM05D007595 ORTHO05D009570 4.9e-58 230.3 170 65.3
Duzib138G0502 Durio zibethinus HOM05D007595 ORTHO05D009570 1.4e-57 228.8 170 64.7
Lsat_1_v5_gn_4_38381 Lactuca sativa HOM05D007595 ORTHO05D009570 7.0e-57 226.5 170 64.7
Sc22g0000140 Simmondsia chinensis HOM05D007595 ORTHO05D009570 7.8e-56 223.0 170 61.2
Sc22g0001280 Simmondsia chinensis HOM05D007595 ORTHO05D009570 7.8e-56 223.0 170 61.2
ClCG05G002930 Citrullus lanatus HOM05D007595 ORTHO05D009570 3.0e-55 221.1 169 64.5
Manes.01G274800 Manihot esculenta HOM05D007595 ORTHO05D009570 3.0e-55 221.1 170 62.9
vmacro09088 Vaccinium macrocarpon HOM05D007595 ORTHO05D009570 3.0e-55 221.1 172 65.7
Cfa011030 Carpinus fangiana HOM05D007595 ORTHO05D009570 3.9e-55 220.7 170 65.3
FAN08G2497 Fragaria x ananassa HOM05D007595 ORTHO05D009570 1.1e-54 219.2 170 63.5
Rhsim05G0178700 Rhododendron simsii HOM05D007595 ORTHO05D009570 1.5e-54 218.8 172 63.4
Cc02_g25530 Coffea canephora HOM05D007595 ORTHO05D009570 1.9e-54 218.4 170 62.9
Sabra14G0039800 Salix brachista HOM05D007595 ORTHO05D009570 2.5e-54 218.0 170 61.8
TWI59G0156 Tripterygium wilfordii HOM05D007595 ORTHO05D009570 2.5e-54 218.0 170 64.7
Potri.014G052800 Populus trichocarpa HOM05D007595 ORTHO05D009570 3.3e-54 217.6 170 61.2
FvH4_5g25080 Fragaria vesca HOM05D007595 ORTHO05D009570 4.3e-54 217.2 170 62.9
Nitab4.5_0000563g0010 Nicotiana tabacum HOM05D007595 ORTHO05D009570 9.5e-54 216.1 157 65.6
Prupe.1G180300 Prunus persica HOM05D007595 ORTHO05D009570 2.1e-53 214.9 170 62.4
Gohir.A12G098700 Gossypium hirsutum HOM05D007595 ORTHO05D009570 4.7e-53 213.8 170 61.8
QL04p026468 Quercus lobata HOM05D007595 ORTHO05D009570 4.7e-53 213.8 169 62.1
CsaV3_3G010510 Cucumis sativus L. HOM05D007595 ORTHO05D009570 5.2e-52 210.3 169 62.1
MELO3C006272.2 Cucumis melo HOM05D007595 ORTHO05D009570 1.2e-51 209.1 169 62.1
Lalb_Chr16g0384971 Lupinus albus HOM05D007595 ORTHO05D009570 1.5e-51 208.8 172 59.9
Phvul.002G094300 Phaseolus vulgaris HOM05D007595 ORTHO05D009570 3.4e-51 207.6 169 58.0
Hund27417 Selenicereus undatus HOM05D007595 ORTHO05D009570 5.8e-51 206.8 172 61.0
Actinidia05786 Actinidia chinensis HOM05D003161 ORTHO05D009570 7.5e-51 206.5 145 69.0
Nitab4.5_0004273g0020 Nicotiana tabacum HOM05D007595 ORTHO05D009570 2.2e-50 204.9 145 66.2
CANSAT54G2206 Cannabis sativa HOM05D007595 ORTHO05D009570 2.9e-50 204.5 170 58.2
Ciclev10018805m.g Citrus clementina HOM05D007595 ORTHO05D009570 3.7e-50 204.1 170 58.2
VMungo0251G3282 Vigna mungo HOM05D007595 ORTHO05D009570 4.9e-50 203.8 169 56.2
Sed0013429 Sechium edule HOM05D007595 ORTHO05D009570 6.4e-50 203.4 169 60.4
CSS0007679 Camellia sinensis var. sinensis HOM05D007595 ORTHO05D009570 1.1e-49 202.6 145 67.6
Lj1g0026949 Lotus japonicus HOM05D007595 ORTHO05D009570 7.1e-49 199.9 177 56.5
SHI13644 Sapria himalayana HOM05D007595 ORTHO05D009570 1.6e-48 198.7 170 57.6
THA.LOC104811608 Tarenaya hassleriana HOM05D007595 ORTHO05D009570 1.0e-47 196.1 170 57.6
PGSC0003DMG400001689 Solanum tuberosum HOM05D007595 ORTHO05D009570 1.3e-47 195.7 145 62.8
Lalb_Chr05g0219501 Lupinus albus HOM05D007595 ORTHO05D009570 3.0e-47 194.5 168 57.7
MBI04_g20744_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D001765 3.0e-47 194.5 687 35.4
MD02G1222500 Malus domestica HOM05D007595 ORTHO05D009570 6.6e-47 193.4 145 64.8
CANSAT25G1659 Cannabis sativa HOM05D007595 ORTHO05D009570 8.6e-47 193.0 170 57.1
Psat3g072800 Pisum sativum HOM05D007595 ORTHO05D009570 8.6e-47 193.0 171 55.6
Glyma.07G218100 Glycine max HOM05D007595 ORTHO05D009570 1.1e-46 192.6 172 54.1
Haze_02895 Corylus avellana HOM05D007595 ORTHO05D009570 1.5e-46 192.2 145 66.9
COL.COLO4_12359 Corchorus olitorius HOM05D007595 ORTHO05D009570 1.2e-45 189.1 145 64.1
AUR62034666 Chenopodium quinoa HOM05D007595 ORTHO05D009570 8.1e-45 186.4 145 62.1
RcHm_v2.0_Chr7g0215291 Rosa chinensis HOM05D007595 ORTHO05D009570 8.1e-45 186.4 145 63.4
AUR62008574 Chenopodium quinoa HOM05D007595 ORTHO05D009570 1.8e-44 185.3 145 60.7
CANSAT78G1456 Cannabis sativa HOM05D007595 ORTHO05D009570 3.1e-44 184.5 170 56.5
Medtr7g091470 Medicago truncatula HOM05D007595 ORTHO05D009570 4.0e-44 184.1 171 52.6
Ah.08g212430 Amaranthus hybridus HOM05D007595 ORTHO05D009570 3.4e-43 181.0 145 60.0
HanXRQChr14g0457401 Helianthus annuus HOM05D007595 ORTHO05D009570 4.4e-43 180.6 144 58.3
MSTRG.20666 Avicennia marina HOM05D007595 ORTHO05D009570 2.2e-42 178.3 170 52.4
DCAR_029507 Daucus carota HOM05D007595 ORTHO05D009570 4.9e-42 177.2 143 62.2
Migut.B01494 Erythranthe guttata HOM05D007595 ORTHO05D009570 1.1e-41 176.0 170 52.4
RcHm_v2.0_Chr4g0407101 Rosa chinensis HOM05D007595 ORTHO05D009570 1.1e-41 176.0 145 60.7
SGA_v2.0_scaffold34G13580 Striga asiatica HOM05D007595 ORTHO05D009570 9.2e-41 172.9 170 51.8
SalBow5G3719 Salvia bowleyana HOM05D007595 ORTHO05D009570 1.0e-39 169.5 170 54.7
Ca_08452_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 5.1e-39 167.2 149 57.0
Ca_08455_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 5.1e-39 167.2 149 57.0
Nn1g00708 Nelumbo nucifera HOM05D007595 ORTHO05D009570 5.1e-39 167.2 141 63.1
PGR042G2115 Punica granatum HOM05D007595 ORTHO05D009570 2.5e-38 164.9 144 57.6
CDE04G2406 Ceratophyllum demersum HOM05D007595 ORTHO05D009570 4.3e-38 164.1 170 50.0
EL10Ac7g17423 Beta vulgaris HOM05D007595 ORTHO05D009570 2.1e-37 161.8 145 53.8
TAR629G2414 Trochodendron aralioides HOM05D007595 ORTHO05D009570 2.8e-37 161.4 125 64.0
Aqoxy7G02148 Aquilegia oxysepala HOM05D007595 ORTHO05D009570 4.7e-37 160.6 174 50.0
PSO675G4153 Papaver somniferum HOM05D007595 ORTHO05D009570 8.1e-37 159.8 179 50.3
PSO732G0035 Papaver somniferum HOM05D007595 ORTHO05D009570 5.2e-36 157.1 179 49.2
PSO732G0412 Papaver somniferum HOM05D007595 ORTHO05D009570 5.2e-36 157.1 179 49.2
Rhsim07G0038800 Rhododendron simsii HOM05D007595 ORTHO05D009570 4.9e-34 150.6 105 69.5
Glyma.20G014500 Glycine max HOM05D007595 ORTHO05D009570 1.8e-28 132.1 102 57.8
Sabra14G0039700 Salix brachista HOM05D007595 ORTHO05D009570 1.8e-28 132.1 224 66.5
ECA234G2641 Erigeron canadensis HOM05D007595 ORTHO05D009570 2.0e-27 128.6 116 50.9
Aa31LG1G28920 Aethionema arabicum HOM05D007595 ORTHO05D009570 5.8e-27 127.1 105 59.0
Thecc.01G401700 Theobroma cacao HOM05D007595 ORTHO05D009570 1.6e-24 119.0 78 71.8
Solyc01g088670.3 Solanum lycopersicum HOM05D007595 ORTHO05D009570 2.7e-24 118.2 127 62.2
FAN18G0104 Fragaria x ananassa HOM05D007595 ORTHO05D009570 3.5e-24 117.9 101 59.4
MD07G1093100 Malus domestica HOM05D007595 ORTHO05D009570 4.6e-24 117.5 106 54.7
RcHm_v2.0_Chr4g0407111 Rosa chinensis HOM05D007595 ORTHO05D009570 1.3e-23 115.9 101 57.4
Gohir.D12G101900 Gossypium hirsutum HOM05D007595 ORTHO05D009570 6.7e-23 113.6 78 69.2
Gorai.008G111100 Gossypium raimondii HOM05D007595 ORTHO05D009570 1.4e-20 105.9 73 61.6
TPR.G3705 Trifolium pratense HOM05D007595 ORTHO05D009570 4.0e-20 104.4 76 61.8
ATR0665G577 Amborella trichopoda HOM05D007595 ORTHO05D009570 1.2e-19 102.8 211 60.7
Cpa.g.sc52.75 Carica papaya HOM05D007595 ORTHO05D009570 4.5e-19 100.9 84 57.1
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 6.2e-13 80.5 159 35.2
HPP92_014879 Vanilla planifolia HOM05D007595 ORTHO05D009570 8.2e-13 80.1 135 38.5
GSVIVG01018339001 Vitis vinifera HOM05D007595 ORTHO05D009570 1.5e-11 75.9 52 67.3
Cc11_g12050 Coffea canephora HOM05D007595 ORTHO05D009570 7.1e-09 67.0 41 73.2
Zm00001eb367370 Zea mays HOM05D011046 ORTHO05D013342 1.6e-08 65.9 111 43.2
Eucgr.D01185 Eucalyptus grandis HOM05D007595 ORTHO05D009570 1.0e-07 63.2 52 57.7
Zm00001eb224150 Zea mays HOM05D011046 ORTHO05D013342 1.3e-07 62.8 107 40.2
Migut.I00272 Erythranthe guttata HOM05D007595 ORTHO05D009570 1.8e-07 62.4 93 35.5
PSO732G0362 Papaver somniferum HOM05D010315 ORTHO05D016663 7.4e-06 57.0 82 32.9


User provided reference genes

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