Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C53T7 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-96 356.7 179 100.0
Lj7A410T9 Lonicera japonica HOM05D000176 ORTHO05D000106 7.9e-52 207.6 110 90.0
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-39 166.4 162 50.6
Lj8A631T22 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-39 166.4 162 50.6
Lj7C368T6 Lonicera japonica HOM05D000176 ORTHO05D000106 3.8e-38 162.2 179 47.5
Lj3C888T3 Lonicera japonica HOM05D000176 ORTHO05D000106 5.0e-38 161.8 179 47.5
Lju188C6G6 Lonicera japonica HOM05D000176 ORTHO05D000106 8.5e-38 161.0 162 48.8
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-37 159.8 179 46.9
Lj2A664T7 Lonicera japonica HOM05D000176 ORTHO05D002183 4.2e-37 158.7 179 54.2
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 3.0e-35 152.5 163 48.5
Lj2C883T0 Lonicera japonica HOM05D000176 ORTHO05D000106 3.3e-34 149.1 179 45.3
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 9.7e-34 147.5 162 47.5
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-33 146.7 194 44.8
Lj8A506T8 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-32 144.1 103 60.2
Lj7A336T29 Lonicera japonica HOM05D000176 ORTHO05D000106 4.1e-32 142.1 158 56.3
Lj3A910T42 Lonicera japonica HOM05D000176 ORTHO05D000106 7.0e-32 141.4 91 81.3
Lj4A452T5 Lonicera japonica HOM05D000176 ORTHO05D000106 7.0e-32 141.4 182 42.9
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 9.1e-32 141.0 166 47.0
Lj3A75T5 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-31 139.8 194 44.8
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-31 139.4 166 46.4
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-31 139.0 166 46.4
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 7.7e-31 137.9 135 48.1
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-30 137.1 194 42.3
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 3.8e-30 135.6 166 44.6
Lj7C349T8 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-29 132.9 111 55.0
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 9.4e-29 131.0 135 46.7
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-28 130.6 187 44.4
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-28 129.8 91 61.5
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-28 129.4 185 41.6
Lj4A52T44 Lonicera japonica HOM05D000176 ORTHO05D000106 6.1e-28 128.3 180 42.8
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 8.0e-28 127.9 89 61.8
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 3.0e-27 125.9 91 60.4
Lj5C240T11 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-26 124.0 91 58.2
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-26 123.2 159 42.1
Lj3A160G33 Lonicera japonica HOM05D000176 ORTHO05D000106 7.4e-26 121.3 122 48.4
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-25 119.8 95 53.7
Lj1A171T29 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-24 117.5 130 46.2
Lju124C17G5 Lonicera japonica HOM05D000176 ORTHO05D000106 4.1e-24 115.5 183 39.9
Lj7P460T35 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-21 106.3 76 64.5
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 4.7e-20 102.1 91 49.5
Lju99C6T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-19 100.9 172 40.1
Lj1A1169T72 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-19 100.5 84 50.0
Lj2C996G10 Lonicera japonica HOM05D000176 ORTHO05D000106 5.2e-19 98.6 91 47.3
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 6.8e-19 98.2 91 47.3
Lj4A736T37 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-18 95.9 69 55.1
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 4.4e-18 95.5 93 54.8
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 4.4e-18 95.5 91 47.3
Lj3A82T20 Lonicera japonica HOM05D000176 ORTHO05D000106 7.5e-18 94.7 118 46.6
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 7.5e-18 94.7 75 52.0
Lj1C9G10 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-17 94.0 151 34.4
Lj2A866T16 Lonicera japonica HOM05D000176 ORTHO05D000106 3.7e-17 92.4 70 61.4
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 4.8e-17 92.0 66 59.1
Lj6P836T32 Lonicera japonica HOM05D000176 ORTHO05D000106 6.3e-17 91.7 87 52.9
Lju124P4T4 Lonicera japonica HOM05D000176 ORTHO05D011435 1.8e-16 90.1 70 60.0
Lj1A54G39 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-16 89.7 151 41.1
Lj8C214G5 Lonicera japonica HOM05D001508 ORTHO05D001381 1.0e-14 84.3 125 36.8
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 8.5e-14 81.3 60 58.3
Lj1E569T0 Lonicera japonica HOM05D000176 ORTHO05D000106 7.2e-13 78.2 69 44.9
Lj7A25T29 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-11 73.9 122 37.7
Lj6C734T17 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-11 73.2 180 32.8
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 3.0e-11 72.8 143 35.7
Lj4C692T4 Lonicera japonica HOM05D000176 ORTHO05D000106 6.8e-11 71.6 91 41.8
Lju4093C0T8 Lonicera japonica HOM05D000176 ORTHO05D000106 6.8e-11 71.6 91 41.8
Lj4C483T6 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-10 70.1 69 46.4
Lj6C556T1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-10 70.1 140 34.3
Lju170A10G17 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-10 70.1 90 40.0
Lj1C479G4 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-10 69.7 69 44.9
Lj4C751G10 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-10 69.7 105 38.1
Lj2C1004G7 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-10 69.3 91 39.6
Lju188C3T12 Lonicera japonica HOM05D000176 ORTHO05D000106 5.7e-10 68.6 91 40.7
Lj2A762T8 Lonicera japonica HOM05D000176 ORTHO05D000106 6.3e-09 65.1 63 46.0
Lj4C435T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-08 64.3 103 37.9
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 7.0e-08 61.6 68 41.2
RcHm_v2.0_Chr5g0043391 Rosa chinensis HOM05D000176 ORTHO05D000106 9.1e-08 61.2 68 41.2
Lju470C8G1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-07 60.8 49 61.2
Lj9C207T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-07 60.5 62 45.2
Lj8A112T24 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-07 59.3 66 42.4
Aqoxy3G01710 Aquilegia oxysepala HOM05D000176 ORTHO05D011435 3.8e-06 55.8 57 36.8
Lj2C845T4 Lonicera japonica HOM05D000176 ORTHO05D000106 5.0e-06 55.5 57 43.9
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 6.6e-06 55.1 68 36.8
Lj2C47G9 Lonicera japonica HOM05D000176 ORTHO05D235791 6.6e-06 55.1 97 37.1


User provided reference genes

Program Settings