Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C536T16 Lonicera japonica HOM05D000068 ORTHO05D000084 7.2e-104 380.6 189 100.0
PGSC0003DMG400022905 Solanum tuberosum HOM05D000068 ORTHO05D000084 8.1e-31 137.9 186 48.9
Potri.001G165000 Populus trichocarpa HOM05D000068 ORTHO05D000084 5.3e-30 135.2 188 48.4
Sopen03g040850 Solanum pennellii HOM05D000068 ORTHO05D000084 5.8e-29 131.7 184 47.8
Migut.I01113 Erythranthe guttata HOM05D000068 ORTHO05D000084 7.6e-29 131.3 158 51.3
Prupe.3G036400 Prunus persica HOM05D000068 ORTHO05D000084 1.1e-27 127.5 193 44.6
Oeu005591.1 Olea europaea HOM05D000068 ORTHO05D000084 2.4e-27 126.3 160 53.8
Oeu008520.1 Olea europaea HOM05D000068 ORTHO05D000084 7.1e-27 124.8 160 48.8
Thecc.06G126100 Theobroma cacao HOM05D000068 ORTHO05D000084 7.1e-27 124.8 161 52.2
Duzib192G0097 Durio zibethinus HOM05D000068 ORTHO05D000084 1.2e-26 124.0 158 51.3
DCAR_022660 Daucus carota HOM05D000068 ORTHO05D000084 2.1e-26 123.2 154 51.9
CAN.G862.32 Capsicum annuum HOM05D000068 ORTHO05D000084 2.7e-26 122.9 172 47.7
Manes.11G015600 Manihot esculenta HOM05D000068 ORTHO05D000084 2.7e-26 122.9 170 47.1
COL.COLO4_30822 Corchorus olitorius HOM05D000068 ORTHO05D000084 4.6e-26 122.1 165 49.1
Nitab4.5_0011227g0010 Nicotiana tabacum HOM05D000068 ORTHO05D000084 1.3e-25 120.6 184 47.8
MD09G1177100 Malus domestica HOM05D000068 ORTHO05D000084 2.3e-25 119.8 180 46.7
Actinidia31163 Actinidia chinensis HOM05D000068 ORTHO05D000084 3.9e-25 119.0 166 49.4
Lsat_1_v5_gn_4_91260 Lactuca sativa HOM05D000068 ORTHO05D000084 8.7e-25 117.9 187 48.1
TAR624G1383 Trochodendron aralioides HOM05D000068 ORTHO05D000084 1.1e-24 117.5 194 44.8
MD17G1149200 Malus domestica HOM05D000068 ORTHO05D000084 1.9e-24 116.7 178 46.6
Actinidia24446 Actinidia chinensis HOM05D000068 ORTHO05D000084 2.5e-24 116.3 162 48.8
Ciclev10027300m.g Citrus clementina HOM05D000068 ORTHO05D000084 5.6e-24 115.2 159 52.2
Eucgr.J02615 Eucalyptus grandis HOM05D000068 ORTHO05D000084 7.4e-24 114.8 158 50.0
Gorai.011G057300 Gossypium raimondii HOM05D000068 ORTHO05D000084 2.1e-23 113.2 185 43.8
Peaxi162Scf00038g01953 Petunia axillaris HOM05D000068 ORTHO05D000084 2.8e-23 112.8 172 46.5
Solyc03g122050.1 Solanum lycopersicum HOM05D000068 ORTHO05D000084 2.8e-23 112.8 155 50.3
RcHm_v2.0_Chr2g0146621 Rosa chinensis HOM05D000068 ORTHO05D000084 8.1e-23 111.3 179 44.7
Cc04_g00960 Coffea canephora HOM05D000068 ORTHO05D000084 1.8e-22 110.2 144 52.8
FAN02G0700 Fragaria x ananassa HOM05D000068 ORTHO05D000084 3.1e-22 109.4 184 46.2
FAN14G5739 Fragaria x ananassa HOM05D000068 ORTHO05D000084 3.1e-22 109.4 156 48.1
FvH4_6g35260 Fragaria vesca HOM05D000068 ORTHO05D000084 4.0e-22 109.0 156 48.1
TWI59G1116 Tripterygium wilfordii HOM05D000068 ORTHO05D000084 4.0e-22 109.0 183 41.0
FAN09G4414 Fragaria x ananassa HOM05D000068 ORTHO05D000084 5.3e-22 108.6 156 48.1
ClCG09G001180 Citrullus lanatus HOM05D000068 ORTHO05D000084 9.0e-22 107.8 147 47.6
Sed0009277 Sechium edule HOM05D000068 ORTHO05D000084 9.0e-22 107.8 148 47.3
Psat4g167400 Pisum sativum HOM05D000068 ORTHO05D000084 1.5e-21 107.1 153 44.4
MELO3C024330.2 Cucumis melo HOM05D000068 ORTHO05D000084 2.0e-21 106.7 142 46.5
PGR102G1712 Punica granatum HOM05D000068 ORTHO05D000084 2.0e-21 106.7 158 48.7
Phvul.010G126200 Phaseolus vulgaris HOM05D000068 ORTHO05D000084 2.6e-21 106.3 183 39.9
CsaV3_7G034200 Cucumis sativus L. HOM05D000068 ORTHO05D000084 3.4e-21 105.9 144 49.3
Lsat_1_v5_gn_1_37740 Lactuca sativa HOM05D000068 ORTHO05D000084 3.4e-21 105.9 202 42.1
MBI19_g18106_MAGBIO Magnolia biondii HOM05D000068 ORTHO05D000084 9.9e-21 104.4 172 47.1
Medtr8g022270 Medicago truncatula HOM05D000068 ORTHO05D000084 1.3e-20 104.0 153 43.8
VMungo0331G1475 Vigna mungo HOM05D000068 ORTHO05D000084 1.7e-20 103.6 188 39.9
Glyma.16G011000 Glycine max HOM05D000068 ORTHO05D000084 2.2e-20 103.2 185 40.5
CSS0016291 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D000084 3.8e-20 102.4 97 58.8
SalBow6G4892 Salvia bowleyana HOM05D000068 ORTHO05D000084 3.8e-20 102.4 181 39.2
Aqoxy7G00985 Aquilegia oxysepala HOM05D000068 ORTHO05D000084 6.4e-20 101.7 160 43.8
SalBow6G7254 Salvia bowleyana HOM05D000068 ORTHO05D000084 6.4e-20 101.7 181 39.2
ECA232G4121 Erigeron canadensis HOM05D000068 ORTHO05D000084 1.9e-19 100.1 176 44.9
FAN05G2869 Fragaria x ananassa HOM05D000068 ORTHO05D000084 1.9e-19 100.1 183 44.3
Ca_04809_v3 Cicer arietinum L. HOM05D000068 ORTHO05D000084 3.2e-19 99.4 157 42.0
ECA247G3641 Erigeron canadensis HOM05D000068 ORTHO05D000084 2.7e-18 96.3 167 43.1
CANSAT56G2908 Cannabis sativa HOM05D000068 ORTHO05D000084 1.8e-17 93.6 142 43.7
HanXRQChr09g0277141 Helianthus annuus HOM05D000068 ORTHO05D000084 2.3e-17 93.2 146 44.5
arahy.Tifrunner.gnm1.ann1.WYBN0Q Arachis hypogaea HOM05D000068 ORTHO05D000084 5.6e-16 88.6 154 39.6
HanXRQChr04g0094451 Helianthus annuus HOM05D000068 ORTHO05D000084 5.6e-16 88.6 162 43.8
Dinv37844 Davidia involucrata HOM05D000068 ORTHO05D000084 1.3e-15 87.4 111 55.0
arahy.Tifrunner.gnm1.ann1.BB2RVD Arachis hypogaea HOM05D000068 ORTHO05D000084 1.6e-15 87.0 153 38.6
PSO421G0139 Papaver somniferum HOM05D000068 ORTHO05D000084 2.8e-15 86.3 158 42.4
Gohir.D10G053700 Gossypium hirsutum HOM05D000068 ORTHO05D000084 2.0e-13 80.1 116 44.8
Nitab4.5_0002072g0030 Nicotiana tabacum HOM05D000068 ORTHO05D000084 7.6e-13 78.2 165 41.2
CiPaw.01G214900 Carya illinoinensis HOM05D000068 ORTHO05D000084 5.5e-11 72.0 130 41.5
ATR0681G187 Amborella trichopoda HOM05D000068 ORTHO05D000084 1.0e-09 67.8 182 36.3
Zm00001eb088790 Zea mays HOM05D000068 ORTHO05D000084 8.2e-07 58.2 108 42.6


User provided reference genes

Program Settings