Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C52G3 Lonicera japonica HOM05D000001 ORTHO05D235815 2.7e-61 238.4 114 100.0
Lj9A60G7 Lonicera japonica HOM05D000001 ORTHO05D233983 4.2e-22 108.2 55 85.5
Lj9C253T5 Lonicera japonica HOM05D000001 ORTHO05D010340 2.1e-10 69.3 50 68.0
Dinv29652 Davidia involucrata HOM05D000001 ORTHO05D010340 4.0e-09 65.1 57 56.1
Hma1.2p1_0157F.1_g069200 Hydrangea macrophylla HOM05D000001 ORTHO05D010340 2.6e-08 62.4 46 63.0
CSS0025115 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D010340 3.4e-08 62.0 55 54.5
CiPaw.05G000900 Carya illinoinensis HOM05D000001 ORTHO05D010340 3.4e-08 62.0 57 52.6
Nitab4.5_0001085g0110 Nicotiana tabacum HOM05D000001 ORTHO05D010340 3.4e-08 62.0 46 65.2
Peaxi162Scf00194g00103 Petunia axillaris HOM05D000001 ORTHO05D010340 7.6e-08 60.8 46 63.0
MSTRG.27889 Avicennia marina HOM05D000001 ORTHO05D010340 9.9e-08 60.5 69 50.7
CAN.G1379.11 Capsicum annuum HOM05D000001 ORTHO05D010340 1.3e-07 60.1 46 63.0
Solyc01g102790.3 Solanum lycopersicum HOM05D000001 ORTHO05D010340 1.3e-07 60.1 46 63.0
Sopen01g045190 Solanum pennellii HOM05D000001 ORTHO05D010340 1.3e-07 60.1 46 63.0
PGSC0003DMG400038566 Solanum tuberosum HOM05D000001 ORTHO05D010340 1.3e-07 60.1 46 63.0
Cc02_g23780 Coffea canephora HOM05D000001 ORTHO05D010340 2.2e-07 59.3 46 63.0
QL02p103708 Quercus lobata HOM05D000001 ORTHO05D010340 2.2e-07 59.3 57 50.9
Actinidia00139 Actinidia chinensis HOM05D000001 ORTHO05D010340 2.9e-07 58.9 38 68.4
Migut.N00870 Erythranthe guttata HOM05D000001 ORTHO05D010340 2.9e-07 58.9 53 54.7
PSO447G0005 Papaver somniferum HOM05D000001 ORTHO05D010340 2.9e-07 58.9 55 56.4
ClCG05G019460 Citrullus lanatus HOM05D000001 ORTHO05D010340 3.8e-07 58.5 49 57.1
Lju99A1T30 Lonicera japonica HOM05D000001 ORTHO05D010340 3.8e-07 58.5 51 56.9
Nn5g27125 Nelumbo nucifera HOM05D000001 ORTHO05D010340 3.8e-07 58.5 45 62.2
Rhsim11G0115100 Rhododendron simsii HOM05D000001 ORTHO05D010340 3.8e-07 58.5 46 60.9
MELO3C018251.2 Cucumis melo HOM05D000001 ORTHO05D010340 6.4e-07 57.8 49 57.1
Lj9C61G0 Lonicera japonica HOM05D000001 ORTHO05D011545 6.4e-07 57.8 51 56.9
DCAR_003271 Daucus carota HOM05D000001 ORTHO05D010340 1.1e-06 57.0 50 60.0
Duzib235G0779 Durio zibethinus HOM05D000001 ORTHO05D010340 1.1e-06 57.0 46 58.7
Cfa004421 Carpinus fangiana HOM05D000001 ORTHO05D010340 1.4e-06 56.6 46 58.7
Haze_09961 Corylus avellana HOM05D000001 ORTHO05D010340 1.4e-06 56.6 46 58.7
HanXRQChr03g0072881 Helianthus annuus HOM05D000001 ORTHO05D010340 1.4e-06 56.6 50 56.0
RcHm_v2.0_Chr7g0218681 Rosa chinensis HOM05D000001 ORTHO05D010340 1.4e-06 56.6 55 50.9
Prupe.1G586800 Prunus persica HOM05D000001 ORTHO05D010340 1.9e-06 56.2 46 58.7
Hund06070 Selenicereus undatus HOM05D000001 ORTHO05D010340 1.9e-06 56.2 38 63.2
MD08G1249600 Malus domestica HOM05D000001 ORTHO05D010340 2.4e-06 55.8 46 56.5
FAN04G1465 Fragaria x ananassa HOM05D000001 ORTHO05D010340 3.2e-06 55.5 46 56.5
Potri.002G021300 Populus trichocarpa HOM05D000001 ORTHO05D009837 3.2e-06 55.5 36 63.9
Sabra02G0017600 Salix brachista HOM05D000001 ORTHO05D009837 3.2e-06 55.5 36 63.9
Thecc.06G063400 Theobroma cacao HOM05D000001 ORTHO05D010340 3.2e-06 55.5 45 57.8
FvH4_5g27410 Fragaria vesca HOM05D000001 ORTHO05D010340 4.2e-06 55.1 46 56.5
FAN08G2066 Fragaria x ananassa HOM05D000001 ORTHO05D010340 4.2e-06 55.1 46 56.5
FAN13G3145 Fragaria x ananassa HOM05D000001 ORTHO05D010340 4.2e-06 55.1 46 56.5
FAN18G4388 Fragaria x ananassa HOM05D000001 ORTHO05D010340 4.2e-06 55.1 46 56.5
Phvul.006G221900 Phaseolus vulgaris HOM05D000001 ORTHO05D010340 4.2e-06 55.1 50 58.0
Lsat_1_v5_gn_9_123020 Lactuca sativa HOM05D000001 ORTHO05D010340 5.5e-06 54.7 45 57.8
Nitab4.5_0001027g0080 Nicotiana tabacum HOM05D000001 ORTHO05D000003 7.1e-06 54.3 46 50.0
Ah.00g000710 Amaranthus hybridus HOM05D000001 ORTHO05D009837 9.3e-06 53.9 49 49.0
Manes.01G139300 Manihot esculenta HOM05D000001 ORTHO05D009837 9.3e-06 53.9 35 65.7
Potri.005G019400 Populus trichocarpa HOM05D000001 ORTHO05D004269 9.3e-06 53.9 48 56.2
Sed0008955 Sechium edule HOM05D000001 ORTHO05D010340 9.3e-06 53.9 46 56.5
GSVIVG01023129001 Vitis vinifera HOM05D000001 ORTHO05D010340 9.3e-06 53.9 46 52.2


User provided reference genes

Program Settings