Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C516T26 Lonicera japonica HOM05D000850 ORTHO05D048429 5.5e-136 487.6 251 100.0
TAR636G2080 Trochodendron aralioides HOM05D000850 ORTHO05D000266 3.5e-29 132.9 276 38.4
Dinv37942 Davidia involucrata HOM05D005216 ORTHO05D006453 1.3e-28 131.0 277 42.2
Duzib192G1066 Durio zibethinus HOM05D000850 ORTHO05D000266 1.1e-27 127.9 321 37.1
Duzib160G0677 Durio zibethinus HOM05D000850 ORTHO05D000266 1.6e-26 124.0 318 37.4
TAR624G0908 Trochodendron aralioides HOM05D000850 ORTHO05D000266 3.0e-25 119.8 245 43.7
MBI04_g12188_MAGBIO Magnolia biondii HOM05D000850 ORTHO05D000266 5.7e-24 115.5 317 36.6
Potri.001G191800 Populus trichocarpa HOM05D000850 ORTHO05D000266 5.7e-24 115.5 309 39.2
TAR383G0103 Trochodendron aralioides HOM05D000850 ORTHO05D000266 7.5e-24 115.2 316 36.4
CiPaw.01G228400 Carya illinoinensis HOM05D000850 ORTHO05D000266 1.8e-22 110.5 308 38.6
Duzib235G0647 Durio zibethinus HOM05D000850 ORTHO05D000266 5.4e-22 109.0 320 35.9
Thecc.06G104800 Theobroma cacao HOM05D000850 ORTHO05D000266 1.2e-21 107.8 276 35.9
CiPaw.02G143300 Carya illinoinensis HOM05D000850 ORTHO05D000266 2.0e-21 107.1 233 39.9
QL05p017288 Quercus lobata HOM05D000850 ORTHO05D000266 2.0e-21 107.1 310 35.8
Aqoxy7G01346 Aquilegia oxysepala HOM05D000850 ORTHO05D000266 4.5e-21 105.9 265 38.1
QL05p017587 Quercus lobata HOM05D000850 ORTHO05D000266 5.9e-21 105.5 310 35.8
Nn8g38974 Nelumbo nucifera HOM05D000850 ORTHO05D000266 7.7e-21 105.1 272 36.8
Prupe.3G054400 Prunus persica HOM05D000850 ORTHO05D000266 2.1e-18 97.1 279 34.8
DCAR_026367 Daucus carota HOM05D000850 ORTHO05D000266 1.4e-17 94.4 271 33.2
Nn6g35380 Nelumbo nucifera HOM05D000850 ORTHO05D048429 1.4e-17 94.4 215 36.7
Manes.04G136500 Manihot esculenta HOM05D000850 ORTHO05D000266 1.8e-17 94.0 235 35.7
Sabra01G0150000 Salix brachista HOM05D000850 ORTHO05D000266 1.2e-16 91.3 305 36.4
DCAR_007601 Daucus carota HOM05D000850 ORTHO05D000266 2.0e-16 90.5 267 34.1
CiPaw.02G143500 Carya illinoinensis HOM05D000850 ORTHO05D000266 2.6e-16 90.1 250 36.4
Gohir.D10G065300 Gossypium hirsutum HOM05D000850 ORTHO05D000266 9.8e-16 88.2 296 33.1
Gorai.011G069200 Gossypium raimondii HOM05D000850 ORTHO05D000266 9.8e-16 88.2 296 33.1
MD09G1198300 Malus domestica HOM05D000850 ORTHO05D000266 2.9e-15 86.7 238 35.7
Cc04_g02340 Coffea canephora HOM05D000850 ORTHO05D000266 3.7e-15 86.3 276 36.6
COL.COLO4_30562 Corchorus olitorius HOM05D000850 ORTHO05D000266 3.7e-15 86.3 310 34.5
VMungo1080G0976 Vigna mungo HOM05D000850 ORTHO05D000266 4.9e-15 85.9 240 35.8
Gohir.A10G063700 Gossypium hirsutum HOM05D000850 ORTHO05D000266 8.3e-15 85.1 296 32.8
Gorai.003G060900 Gossypium raimondii HOM05D000850 ORTHO05D000266 8.3e-15 85.1 283 36.4
MD17G1179100 Malus domestica HOM05D000850 ORTHO05D000266 2.4e-14 83.6 289 32.9
VMungo0331G2044 Vigna mungo HOM05D000850 ORTHO05D000266 2.4e-14 83.6 223 36.3
Cpa.g.sc131.7 Carica papaya HOM05D000850 ORTHO05D000266 3.2e-14 83.2 281 33.5
Gohir.D03G057400 Gossypium hirsutum HOM05D000850 ORTHO05D000266 7.0e-14 82.0 283 34.6
Oeu002524.1 Olea europaea HOM05D000850 ORTHO05D000266 3.5e-13 79.7 283 30.4
Cfa003619 Carpinus fangiana HOM05D000850 ORTHO05D000266 4.6e-13 79.3 270 33.0
DCAR_016180 Daucus carota HOM05D000850 ORTHO05D000266 4.6e-13 79.3 250 32.4
Glyma.07G013600 Glycine max HOM05D000850 ORTHO05D000266 4.6e-13 79.3 286 30.4
Phvul.005G161900 Phaseolus vulgaris HOM05D000850 ORTHO05D000266 1.3e-12 77.8 287 32.8
Lj3g0024873 Lotus japonicus HOM05D000850 ORTHO05D000266 2.3e-12 77.0 295 31.2
Medtr8g015450 Medicago truncatula HOM05D000850 ORTHO05D000266 3.0e-12 76.6 294 31.3
Haze_15897 Corylus avellana HOM05D000850 ORTHO05D000266 6.6e-12 75.5 137 41.6
ATR0789G052 Amborella trichopoda HOM05D000850 ORTHO05D000266 4.3e-11 72.8 170 34.7
Gohir.A02G116600 Gossypium hirsutum HOM05D000850 ORTHO05D000266 9.5e-11 71.6 283 32.5
Dinv30411 Davidia involucrata HOM05D000850 ORTHO05D000266 1.6e-10 70.9 120 44.2
ClCG09G000460 Citrullus lanatus HOM05D000850 ORTHO05D000266 3.6e-10 69.7 252 30.2
Ciclev10026976m.g Citrus clementina HOM05D000850 ORTHO05D000266 4.7e-10 69.3 267 31.8
MELO3C024411.2 Cucumis melo HOM05D000850 ORTHO05D000266 6.2e-10 68.9 127 40.9
RcHm_v2.0_Chr2g0141851 Rosa chinensis HOM05D000850 ORTHO05D000266 1.0e-09 68.2 238 30.7
CsaV3_7G035000 Cucumis sativus L. HOM05D000850 ORTHO05D000266 1.4e-09 67.8 159 37.1
Lj3g0005850 Lotus japonicus HOM05D000850 ORTHO05D000266 1.8e-09 67.4 268 32.1
Manes.11G029700 Manihot esculenta HOM05D000850 ORTHO05D000266 1.8e-09 67.4 231 33.8
Nitab4.5_0002656g0050 Nicotiana tabacum HOM05D000850 ORTHO05D000266 1.8e-09 67.4 276 31.5
Peaxi162Scf00038g01110 Petunia axillaris HOM05D000850 ORTHO05D000266 3.1e-09 66.6 232 37.9
Glyma.13G352600 Glycine max HOM05D000850 ORTHO05D000266 4.0e-09 66.2 224 37.1
Glyma.08G197600 Glycine max HOM05D000850 ORTHO05D000266 1.2e-08 64.7 216 31.5
MBI01_g16595_MAGBIO Magnolia biondii HOM05D000850 ORTHO05D000266 1.2e-08 64.7 280 28.2
Glyma.15G022000 Glycine max HOM05D000850 ORTHO05D000266 2.0e-08 63.9 214 33.6
Nitab4.5_0000300g0100 Nicotiana tabacum HOM05D000850 ORTHO05D000266 5.8e-08 62.4 297 28.6
Nitab4.5_0005661g0010 Nicotiana tabacum HOM05D000850 ORTHO05D000266 5.8e-08 62.4 148 43.2
Ca_01179_v3 Cicer arietinum L. HOM05D000850 ORTHO05D000266 7.5e-08 62.0 123 47.2
Solyc03g121240.1 Solanum lycopersicum HOM05D000850 ORTHO05D000266 1.7e-07 60.8 147 41.5
Sed0004460 Sechium edule HOM05D000850 ORTHO05D000266 2.9e-07 60.1 246 32.1
Nitab4.5_0011541g0020 Nicotiana tabacum HOM05D000850 ORTHO05D000266 3.7e-07 59.7 162 40.1
PGSC0003DMG400004875 Solanum tuberosum HOM05D000850 ORTHO05D000266 6.4e-07 58.9 233 32.6
MSTRG.22615 Avicennia marina HOM05D000850 ORTHO05D000266 8.3e-07 58.5 121 42.1
FvH4_6g32760 Fragaria vesca HOM05D000850 ORTHO05D000266 8.3e-07 58.5 232 28.9
TPR.G8753 Trifolium pratense HOM05D000850 ORTHO05D000266 1.4e-06 57.8 118 42.4
C03p51650 Brassica napus HOM05D000850 ORTHO05D000266 1.9e-06 57.4 112 38.4
Sopen03g040050 Solanum pennellii HOM05D000850 ORTHO05D000266 1.9e-06 57.4 142 40.1
PGSC0003DMG400002515 Solanum tuberosum HOM05D000850 ORTHO05D000266 1.9e-06 57.4 146 39.0
Lalb_Chr14g0372951 Lupinus albus HOM05D000850 ORTHO05D000266 2.4e-06 57.0 293 28.3
CAN.G1143.34 Capsicum annuum HOM05D000850 ORTHO05D000266 7.0e-06 55.5 139 38.8
FAN09G1713 Fragaria x ananassa HOM05D000850 ORTHO05D000266 7.0e-06 55.5 232 28.4
Solyc06g062460.3 Solanum lycopersicum HOM05D000850 ORTHO05D000266 7.0e-06 55.5 235 33.6
Sopen06g021950 Solanum pennellii HOM05D000850 ORTHO05D000266 7.0e-06 55.5 267 31.8


User provided reference genes

Program Settings