Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 5.4e-176 620.9 324 100.0
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 7.6e-146 520.8 329 82.4
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 1.6e-143 513.1 326 79.4
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 1.0e-142 510.4 326 81.9
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 9.7e-141 503.8 328 79.0
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 2.8e-140 502.3 326 80.4
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 1.1e-139 500.4 328 78.7
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 3.1e-139 498.8 328 78.4
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 8.5e-137 490.7 325 78.8
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 5.1e-134 481.5 333 74.5
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 2.0e-133 479.6 329 77.2
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 3.3e-133 478.8 324 75.6
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 9.7e-133 477.2 329 76.9
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 9.7e-133 477.2 328 75.3
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 1.3e-132 476.9 332 75.6
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 1.7e-132 476.5 324 75.9
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 4.8e-132 474.9 327 76.1
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 6.3e-132 474.6 332 75.3
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 8.2e-132 474.2 332 75.0
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 1.1e-131 473.8 330 77.3
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 6.9e-131 471.1 321 76.3
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 9.1e-131 470.7 333 74.5
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 1.0e-129 467.2 331 73.1
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 2.2e-129 466.1 331 72.8
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 3.8e-129 465.3 333 74.5
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 6.5e-129 464.5 329 74.5
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 6.5e-129 464.5 331 75.8
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 8.5e-129 464.2 326 75.2
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 1.1e-128 463.8 308 77.9
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 3.2e-128 462.2 329 73.9
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 3.2e-128 462.2 328 73.8
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 3.2e-128 462.2 332 72.9
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 7.2e-128 461.1 329 74.8
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 4.7e-127 458.4 328 74.4
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 4.7e-127 458.4 323 73.7
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 6.1e-127 458.0 331 74.0
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 1.8e-126 456.4 327 74.0
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 8.8e-126 454.1 328 74.1
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 2.0e-125 453.0 326 73.6
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 3.3e-125 452.2 333 71.8
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 5.7e-125 451.4 282 79.8
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 3.7e-124 448.7 326 73.0
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 6.3e-124 448.0 328 72.0
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 6.3e-124 448.0 326 72.4
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 8.2e-124 447.6 326 72.4
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 1.1e-123 447.2 311 74.3
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 4.1e-123 445.3 326 70.6
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 4.1e-123 445.3 328 71.3
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 5.3e-123 444.9 325 71.4
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 5.3e-123 444.9 345 69.6
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 2.0e-122 443.0 334 70.4
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 3.5e-122 442.2 322 71.4
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.7e-121 439.9 323 71.2
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 2.2e-121 439.5 328 72.3
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 3.8e-121 438.7 324 71.6
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 8.5e-121 437.6 328 72.0
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 4.2e-120 435.3 323 70.6
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 5.5e-120 434.9 326 69.9
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 1.2e-119 433.7 323 70.3
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 1.6e-119 433.3 329 71.1
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 8.8e-118 427.6 271 80.1
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 2.6e-117 426.0 322 70.2
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 5.7e-117 424.9 273 78.8
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 5.7e-117 424.9 283 76.3
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 7.4e-117 424.5 283 77.0
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 1.3e-116 423.7 334 69.5
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 2.2e-116 422.9 283 76.7
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 2.2e-116 422.9 283 76.7
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 2.2e-116 422.9 283 76.7
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 2.8e-116 422.5 283 76.3
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 2.8e-116 422.5 321 68.8
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 4.8e-116 421.8 284 76.8
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 6.3e-116 421.4 292 75.0
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 8.2e-116 421.0 324 69.8
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 3.1e-115 419.1 283 75.6
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 5.3e-115 418.3 324 69.1
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 5.3e-115 418.3 318 69.2
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 7.0e-115 417.9 318 69.2
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 9.1e-115 417.5 271 78.2
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 3.5e-114 415.6 326 67.8
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 4.5e-114 415.2 318 69.5
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 1.3e-113 413.7 318 69.8
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 1.7e-113 413.3 288 75.3
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 2.2e-113 412.9 260 79.6
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 5.5e-112 408.3 325 67.4
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 6.1e-111 404.8 324 67.9
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 4.4e-109 398.7 312 67.6
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 9.7e-109 397.5 233 84.1
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 1.1e-107 394.0 288 70.1
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 1.1e-107 394.0 324 66.0
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 1.1e-107 394.0 324 64.5
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 1.6e-106 390.2 289 70.9
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 2.7e-106 389.4 238 81.5
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 2.7e-106 389.4 238 81.5
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 2.2e-105 386.3 233 82.0
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 2.9e-105 386.0 303 65.0
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 1.9e-104 383.3 297 69.4
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 2.3e-102 376.3 315 65.1
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 1.7e-97 360.1 242 73.6
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 2.5e-96 356.3 268 66.8
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 3.0e-94 349.4 211 83.4
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 4.0e-94 349.0 324 58.6
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 6.8e-94 348.2 265 66.8
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 7.8e-90 334.7 266 62.8
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 1.0e-86 324.3 286 62.6
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 3.1e-86 322.8 268 59.7
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 1.4e-83 313.9 251 63.7
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 1.1e-75 287.7 274 55.5
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 2.0e-69 266.9 229 63.8
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 4.9e-68 262.3 306 52.3
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 1.9e-67 260.4 200 72.0
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 1.8e-62 243.8 257 54.9
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 2.1e-58 230.3 231 57.6
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 3.9e-57 226.1 156 76.9
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 1.5e-37 161.0 103 71.8
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 4.2e-19 99.8 68 67.6
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 1.6e-18 97.8 70 62.9
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 7.4e-08 62.4 64 59.4
Eucgr.G02044 Eucalyptus grandis HOM05D006891 ORTHO05D008671 7.0e-06 55.8 127 37.8


User provided reference genes

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