Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C465T15 Lonicera japonica HOM05D009487 ORTHO05D011434 4.1e-189 664.5 311 100.0
Lj9C465T16 Lonicera japonica HOM05D009487 ORTHO05D011434 1.2e-100 370.5 315 58.7
CSS0036745 Camellia sinensis var. sinensis HOM05D009487 ORTHO05D011434 8.1e-44 181.8 327 37.6
Hma1.2p1_0071F.1_g037940 Hydrangea macrophylla HOM05D009487 ORTHO05D011434 5.3e-27 125.9 253 32.0
Hma1.2p1_0071F.1_g037920 Hydrangea macrophylla HOM05D009487 ORTHO05D011434 1.4e-24 117.9 252 31.7
Nn1g09219 Nelumbo nucifera HOM05D009487 ORTHO05D011434 1.4e-24 117.9 272 33.1
Rhsim07G0047500 Rhododendron simsii HOM05D009487 ORTHO05D011434 5.6e-21 105.9 321 30.5
Rhsim13G0006900 Rhododendron simsii HOM05D009487 ORTHO05D011434 1.6e-20 104.4 255 31.0
DCAR_025206 Daucus carota HOM05D009487 ORTHO05D011434 7.6e-18 95.5 255 29.0
Nn2g13898 Nelumbo nucifera HOM05D009487 ORTHO05D011434 9.3e-16 88.6 277 27.8
RhsimUnG0032500 Rhododendron simsii HOM05D009487 ORTHO05D011434 1.6e-15 87.8 271 27.7
Rhsim05G0150400 Rhododendron simsii HOM05D009487 ORTHO05D011434 2.7e-15 87.0 271 27.7
RhsimUnG0144600 Rhododendron simsii HOM05D009487 ORTHO05D011434 2.7e-15 87.0 271 27.7
Rhsim05G0023000 Rhododendron simsii HOM05D009487 ORTHO05D011434 4.6e-15 86.3 267 27.7
DCAR_005359 Daucus carota HOM05D009487 ORTHO05D011434 3.0e-14 83.6 256 26.6
RhsimUnG0032700 Rhododendron simsii HOM05D009487 ORTHO05D011434 8.7e-14 82.0 345 24.6
Rhsim05G0023100 Rhododendron simsii HOM05D009487 ORTHO05D011434 1.1e-13 81.6 261 25.7
Aqoxy2G00485 Aquilegia oxysepala HOM05D026504 ORTHO05D011434 1.5e-13 81.3 246 27.2
RhsimUnG0032600 Rhododendron simsii HOM05D009487 ORTHO05D011434 1.9e-13 80.9 345 24.6
RhsimUnG0144700 Rhododendron simsii HOM05D009487 ORTHO05D011434 4.8e-12 76.3 345 23.8
RhsimUnG0144900 Rhododendron simsii HOM05D009487 ORTHO05D011434 6.2e-12 75.9 276 25.4
RhsimUnG0188900 Rhododendron simsii HOM05D009487 ORTHO05D011434 8.1e-12 75.5 276 25.4
DCAR_025207 Daucus carota HOM05D009487 ORTHO05D011434 2.6e-10 70.5 211 27.5
DCAR_025205 Daucus carota HOM05D000041 ORTHO05D008933 1.7e-09 67.8 114 37.7
Dinv31694 Davidia involucrata HOM05D001286 ORTHO05D000440 2.2e-09 67.4 239 25.9
Rhsim08G0205000 Rhododendron simsii HOM05D001286 ORTHO05D000440 2.9e-09 67.0 261 26.1
TAR369G0060 Trochodendron aralioides HOM05D001286 ORTHO05D000440 2.9e-09 67.0 251 24.7
Manes.09G054600 Manihot esculenta HOM05D001286 ORTHO05D000440 1.4e-08 64.7 247 26.7
TAR374G1264 Trochodendron aralioides HOM05D001286 ORTHO05D000440 3.2e-08 63.5 243 27.6
QL04p042600 Quercus lobata HOM05D001286 ORTHO05D000440 5.5e-08 62.8 235 25.1
RhsimUnG0188800 Rhododendron simsii HOM05D009487 ORTHO05D011434 9.3e-08 62.0 258 24.0
QL04p042652 Quercus lobata HOM05D001286 ORTHO05D000440 1.2e-07 61.6 238 24.4
QL04p042669 Quercus lobata HOM05D001286 ORTHO05D000440 1.2e-07 61.6 238 24.4
Rhsim08G0205300 Rhododendron simsii HOM05D001286 ORTHO05D000440 2.7e-07 60.5 259 24.7
Thecc.05G090300 Theobroma cacao HOM05D001286 ORTHO05D000440 2.7e-07 60.5 242 25.2
TAR369G0559 Trochodendron aralioides HOM05D001286 ORTHO05D000440 7.9e-07 58.9 263 24.0
TAR369G0746 Trochodendron aralioides HOM05D001286 ORTHO05D000440 7.9e-07 58.9 263 24.0
Thecc.05G212700 Theobroma cacao HOM05D001286 ORTHO05D000440 5.1e-06 56.2 240 23.8
QL04p042854 Quercus lobata HOM05D001286 ORTHO05D000440 6.7e-06 55.8 198 26.3


User provided reference genes

Program Settings