Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 1.0e-31 139.4 71 100.0
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 1.7e-26 122.1 70 85.7
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 1.7e-26 122.1 70 88.6
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 1.7e-26 122.1 70 88.6
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 2.3e-26 121.7 70 81.4
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 2.3e-26 121.7 70 81.4
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 6.6e-26 120.2 70 87.1
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 6.6e-26 120.2 70 87.1
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 8.6e-26 119.8 70 85.7
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 1.9e-25 118.6 70 87.1
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 3.3e-25 117.9 73 84.9
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 7.3e-25 116.7 70 84.3
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 1.6e-24 115.5 70 82.9
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 2.1e-24 115.2 70 82.9
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 4.7e-24 114.0 70 80.0
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 4.7e-24 114.0 70 80.0
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 4.7e-24 114.0 70 81.4
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 4.7e-24 114.0 70 78.6
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 6.2e-24 113.6 69 82.6
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 1.1e-23 112.8 70 80.0
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 1.1e-23 112.8 70 81.4
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 2.3e-23 111.7 70 77.1
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 3.1e-23 111.3 70 78.6
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 3.1e-23 111.3 70 80.0
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 4.0e-23 110.9 70 71.4
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 4.0e-23 110.9 70 80.0
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 5.2e-23 110.5 68 79.4
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 5.2e-23 110.5 70 78.6
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 1.5e-22 109.0 69 82.6
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 2.0e-22 108.6 69 78.3
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 2.0e-22 108.6 69 78.3
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 2.0e-22 108.6 70 75.7
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 2.0e-22 108.6 70 75.7
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 2.0e-22 108.6 70 78.6
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 2.0e-22 108.6 70 75.7
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 2.6e-22 108.2 70 75.7
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 2.6e-22 108.2 70 77.1
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 2.6e-22 108.2 68 79.4
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 2.6e-22 108.2 70 77.1
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 5.8e-22 107.1 68 76.5
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 7.5e-22 106.7 69 76.8
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 7.5e-22 106.7 69 76.8
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 7.5e-22 106.7 69 78.3
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 7.5e-22 106.7 69 78.3
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 7.5e-22 106.7 70 78.6
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 9.8e-22 106.3 69 76.8
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 9.8e-22 106.3 70 77.1
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 9.8e-22 106.3 69 72.5
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 9.8e-22 106.3 68 77.9
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 1.3e-21 105.9 69 76.8
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 1.3e-21 105.9 69 73.9
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 1.3e-21 105.9 70 72.9
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 1.3e-21 105.9 69 76.8
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 1.7e-21 105.5 69 76.8
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 1.7e-21 105.5 69 76.8
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 1.7e-21 105.5 70 72.9
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 1.7e-21 105.5 68 75.0
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 1.7e-21 105.5 68 75.0
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 2.2e-21 105.1 68 75.0
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 2.9e-21 104.8 70 71.4
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 2.9e-21 104.8 69 76.8
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 2.9e-21 104.8 70 72.9
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 4.9e-21 104.0 69 75.4
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 6.4e-21 103.6 70 72.9
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 8.3e-21 103.2 70 71.4
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 1.4e-20 102.4 70 74.3
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 1.4e-20 102.4 70 74.3
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 1.9e-20 102.1 69 75.4
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 4.1e-20 100.9 70 72.9
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 5.4e-20 100.5 70 74.3
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 9.2e-20 99.8 70 72.9
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 9.2e-20 99.8 69 69.6
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 1.2e-19 99.4 68 73.5
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 1.6e-19 99.0 75 70.7
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 2.1e-19 98.6 68 72.1
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 3.5e-19 97.8 70 72.9
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 1.0e-18 96.3 68 72.1
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 1.7e-18 95.5 70 68.6
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.7e-18 95.5 70 68.6
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.7e-18 95.5 70 68.6
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.7e-18 95.5 70 68.6
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.7e-18 95.5 70 68.6
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 3.0e-18 94.7 70 65.7
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 1.1e-17 92.8 70 65.7
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 1.9e-17 92.0 70 64.3
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 1.6e-16 89.0 53 81.1
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 2.6e-14 81.6 70 57.1
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 1.3e-13 79.3 70 60.0
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 6.4e-13 77.0 49 77.6
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 3.5e-11 71.2 73 52.1
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 4.6e-11 70.9 53 66.0
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 3.9e-10 67.8 70 44.3
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 2.5e-09 65.1 70 45.7
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 5.6e-09 63.9 70 44.3
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 5.6e-09 63.9 68 50.0
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 1.2e-08 62.8 70 45.7
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 4.4e-06 54.3 70 34.3
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 9.9e-06 53.1 61 41.0


User provided reference genes

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