Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C280T4 Lonicera japonica HOM05D002012 ORTHO05D001992 3.7e-123 444.9 223 100.0
Dinv42379 Davidia involucrata HOM05D002012 ORTHO05D001992 7.1e-42 174.9 200 56.0
Dinv25565 Davidia involucrata HOM05D002012 ORTHO05D001992 3.3e-39 166.0 201 54.2
CSS0019146 Camellia sinensis var. sinensis HOM05D002012 ORTHO05D001992 3.8e-35 152.5 199 50.8
Sabra06G0112000 Salix brachista HOM05D002012 ORTHO05D001992 1.7e-32 143.7 199 49.2
Cc06_g12050 Coffea canephora HOM05D002012 ORTHO05D001992 6.6e-32 141.7 200 46.5
GSVIVG01015094001 Vitis vinifera HOM05D002012 ORTHO05D001992 2.5e-31 139.8 201 46.8
vmacro17189 Vaccinium macrocarpon HOM05D002012 ORTHO05D001992 7.3e-31 138.3 200 49.0
Potri.006G143000 Populus trichocarpa HOM05D002012 ORTHO05D001992 3.6e-30 136.0 195 47.7
PGR142G4458 Punica granatum HOM05D002012 ORTHO05D001992 1.4e-29 134.0 202 43.1
QL11p000520 Quercus lobata HOM05D002012 ORTHO05D001992 5.3e-29 132.1 199 48.2
Thecc.09G078800 Theobroma cacao HOM05D002012 ORTHO05D001992 5.3e-29 132.1 195 48.2
Haze_25988 Corylus avellana HOM05D002012 ORTHO05D001992 1.2e-28 131.0 202 44.1
Haze_25996 Corylus avellana HOM05D002012 ORTHO05D001992 1.2e-28 131.0 202 44.1
Manes.16G096300 Manihot esculenta HOM05D002012 ORTHO05D001992 2.0e-28 130.2 199 47.2
TAR624G1209 Trochodendron aralioides HOM05D002012 ORTHO05D001992 2.0e-28 130.2 199 44.7
Gohir.D07G200800 Gossypium hirsutum HOM05D002012 ORTHO05D001992 5.8e-28 128.6 196 46.9
Gorai.001G225400 Gossypium raimondii HOM05D002012 ORTHO05D001992 5.8e-28 128.6 196 46.9
Gohir.D05G034900 Gossypium hirsutum HOM05D002012 ORTHO05D001992 7.6e-28 128.3 197 47.7
Gorai.009G035300 Gossypium raimondii HOM05D002012 ORTHO05D001992 7.6e-28 128.3 197 47.7
Cfa003016 Carpinus fangiana HOM05D002012 ORTHO05D001992 2.2e-27 126.7 203 44.3
RhsimUnG0192400 Rhododendron simsii HOM05D002012 ORTHO05D001992 1.1e-26 124.4 194 45.4
Actinidia30209 Actinidia chinensis HOM05D002012 ORTHO05D001992 2.4e-26 123.2 198 44.9
TWI34G1750 Tripterygium wilfordii HOM05D002012 ORTHO05D001992 2.4e-26 123.2 199 43.7
CiPaw.03G207500 Carya illinoinensis HOM05D002012 ORTHO05D001992 3.2e-26 122.9 203 45.3
Eucgr.C00822 Eucalyptus grandis HOM05D002012 ORTHO05D001992 9.3e-26 121.3 199 40.7
Glyma.09G068800 Glycine max HOM05D002012 ORTHO05D001992 1.2e-25 120.9 204 44.1
Prupe.7G200900 Prunus persica HOM05D002012 ORTHO05D001992 1.2e-25 120.9 203 45.8
FvH4_1g08450 Fragaria vesca HOM05D002012 ORTHO05D001992 6.0e-25 118.6 202 45.0
TAR636G0107 Trochodendron aralioides HOM05D002012 ORTHO05D001992 6.0e-25 118.6 152 49.3
FAN26G1695 Fragaria x ananassa HOM05D002012 ORTHO05D001992 1.8e-24 117.1 202 46.0
Glyma.15G176600 Glycine max HOM05D002012 ORTHO05D001992 1.8e-24 117.1 203 42.9
Actinidia39668 Actinidia chinensis HOM05D002012 ORTHO05D001992 2.3e-24 116.7 198 44.4
CANSAT56G2451 Cannabis sativa HOM05D002012 ORTHO05D001992 3.0e-24 116.3 201 43.3
FAN19G0643 Fragaria x ananassa HOM05D002012 ORTHO05D001992 3.0e-24 116.3 202 44.6
FAN28G1411 Fragaria x ananassa HOM05D002012 ORTHO05D001992 6.7e-24 115.2 202 45.5
FAN23G2131 Fragaria x ananassa HOM05D002012 ORTHO05D001992 8.7e-24 114.8 202 45.5
FAN26G0159 Fragaria x ananassa HOM05D002012 ORTHO05D001992 1.9e-23 113.6 202 45.5
Lj7C686G2 Lonicera japonica HOM05D002012 ORTHO05D001992 1.9e-23 113.6 197 42.1
Gohir.D12G039000 Gossypium hirsutum HOM05D002012 ORTHO05D001992 2.5e-23 113.2 183 45.4
Peaxi162Scf00127g00035 Petunia axillaris HOM05D002012 ORTHO05D001992 4.3e-23 112.5 199 42.7
Sed0014285 Sechium edule HOM05D002012 ORTHO05D001992 4.3e-23 112.5 196 43.4
MD15G1216100 Malus domestica HOM05D002012 ORTHO05D001992 7.4e-23 111.7 203 43.3
Solyc07g041660.4 Solanum lycopersicum HOM05D002012 ORTHO05D001992 2.8e-22 109.8 198 42.4
Gohir.A05G033400 Gossypium hirsutum HOM05D002012 ORTHO05D001992 4.8e-22 109.0 195 43.6
Oeu063415.1 Olea europaea HOM05D002012 ORTHO05D001992 6.2e-22 108.6 198 43.9
DCAR_011951 Daucus carota HOM05D002012 ORTHO05D001992 1.4e-21 107.5 202 42.1
ECA236G1251 Erigeron canadensis HOM05D002012 ORTHO05D001992 1.4e-21 107.5 198 43.4
Lj6g0020899 Lotus japonicus HOM05D002012 ORTHO05D001992 1.4e-21 107.5 201 40.8
Ciclev10007498m.g Citrus clementina HOM05D002012 ORTHO05D001992 1.8e-21 107.1 196 44.4
Nitab4.5_0008382g0010 Nicotiana tabacum HOM05D002012 ORTHO05D001992 1.8e-21 107.1 199 41.7
Sed0011181 Sechium edule HOM05D002012 ORTHO05D001992 1.8e-21 107.1 202 42.1
COL.COLO4_18109 Corchorus olitorius HOM05D002012 ORTHO05D001992 3.1e-21 106.3 195 43.1
MD00G1142500 Malus domestica HOM05D002012 ORTHO05D001992 3.1e-21 106.3 203 41.9
Nn8g38672 Nelumbo nucifera HOM05D002012 ORTHO05D001992 4.0e-21 105.9 200 40.0
Sopen07g021140 Solanum pennellii HOM05D002012 ORTHO05D001992 4.0e-21 105.9 198 40.9
Manes.03G039600 Manihot esculenta HOM05D002012 ORTHO05D001992 9.0e-21 104.8 200 44.0
Nitab4.5_0000343g0100 Nicotiana tabacum HOM05D002012 ORTHO05D001992 9.0e-21 104.8 199 41.2
TWI63G1275 Tripterygium wilfordii HOM05D002012 ORTHO05D001992 2.0e-20 103.6 208 38.5
CsaV3_2G001170 Cucumis sativus L. HOM05D002012 ORTHO05D001992 5.8e-20 102.1 196 40.3
Medtr2g041470 Medicago truncatula HOM05D002012 ORTHO05D001992 5.8e-20 102.1 205 41.5
RcHm_v2.0_Chr2g0094551 Rosa chinensis HOM05D002012 ORTHO05D001992 5.8e-20 102.1 202 40.1
CiPaw.04G144400 Carya illinoinensis HOM05D002012 ORTHO05D001992 1.7e-19 100.5 203 40.9
ClCG11G001450 Citrullus lanatus HOM05D002012 ORTHO05D001992 1.7e-19 100.5 196 40.8
arahy.Tifrunner.gnm1.ann1.TG362X Arachis hypogaea HOM05D002012 ORTHO05D001992 4.9e-19 99.0 199 38.7
Duzib187G1411 Durio zibethinus HOM05D002012 ORTHO05D001992 4.9e-19 99.0 195 41.0
Phvul.009G227900 Phaseolus vulgaris HOM05D002012 ORTHO05D001992 4.9e-19 99.0 202 38.1
Psat1g133640 Pisum sativum HOM05D002012 ORTHO05D001992 6.4e-19 98.6 201 39.3
MELO3C004651.2 Cucumis melo HOM05D002012 ORTHO05D001992 8.4e-19 98.2 198 41.4
VMungo1309G2233 Vigna mungo HOM05D002012 ORTHO05D001992 1.1e-18 97.8 202 37.1
Ca_26331_v3 Cicer arietinum L. HOM05D002012 ORTHO05D001992 1.4e-18 97.4 197 38.6
Lalb_Chr11g0074281 Lupinus albus HOM05D002012 ORTHO05D001992 1.9e-18 97.1 196 38.3
Oeu020557.1 Olea europaea HOM05D002012 ORTHO05D001992 2.4e-18 96.7 198 40.4
CAN.G258.8 Capsicum annuum HOM05D002012 ORTHO05D001992 3.2e-18 96.3 198 39.4
TPR.G28669 Trifolium pratense HOM05D002012 ORTHO05D001992 3.2e-18 96.3 199 37.7
HanXRQChr12g0354321 Helianthus annuus HOM05D002012 ORTHO05D001992 4.2e-18 95.9 200 36.5
HanXRQChr06g0178161 Helianthus annuus HOM05D002012 ORTHO05D001992 7.1e-18 95.1 198 39.9
arahy.Tifrunner.gnm1.ann1.I4CWBG Arachis hypogaea HOM05D002012 ORTHO05D001992 1.2e-17 94.4 199 38.2
VMungo1215G3349 Vigna mungo HOM05D002012 ORTHO05D001992 2.1e-17 93.6 199 36.7
arahy.Tifrunner.gnm1.ann1.H8KNJ8 Arachis hypogaea HOM05D002012 ORTHO05D001992 3.5e-17 92.8 200 36.0
Glyma.13G109600 Glycine max HOM05D002012 ORTHO05D001992 6.0e-17 92.0 200 38.5
AUR62025192 Chenopodium quinoa HOM05D002012 ORTHO05D001992 7.9e-17 91.7 207 37.7
Glyma.17G050100 Glycine max HOM05D002012 ORTHO05D001992 7.9e-17 91.7 199 39.7
MSTRG.19467 Avicennia marina HOM05D002012 ORTHO05D001992 1.0e-16 91.3 199 41.2
EL10Ac8g19105 Beta vulgaris HOM05D002012 ORTHO05D001992 1.3e-16 90.9 213 36.6
ECA234G2093 Erigeron canadensis HOM05D002012 ORTHO05D001992 1.8e-16 90.5 197 39.1
arahy.Tifrunner.gnm1.ann1.BD8MJQ Arachis hypogaea HOM05D002012 ORTHO05D001992 2.3e-16 90.1 204 36.3
AUR62028982 Chenopodium quinoa HOM05D002012 ORTHO05D001992 3.0e-16 89.7 207 39.1
SalBow6G4123 Salvia bowleyana HOM05D002012 ORTHO05D001992 5.1e-16 89.0 196 38.3
Lsat_1_v5_gn_8_86401 Lactuca sativa HOM05D002012 ORTHO05D001992 8.7e-16 88.2 100 48.0
DCAR_028322 Daucus carota HOM05D002012 ORTHO05D001992 1.5e-15 87.4 203 39.4
Migut.J00935 Erythranthe guttata HOM05D002012 ORTHO05D001992 1.9e-15 87.0 189 40.2
HanXRQChr10g0319671 Helianthus annuus HOM05D002012 ORTHO05D001992 3.3e-15 86.3 198 37.4
Atru.chr7.1695 Acer truncatum HOM05D002012 ORTHO05D001992 1.3e-14 84.3 197 40.6
Phvul.003G131700 Phaseolus vulgaris HOM05D002012 ORTHO05D001992 1.3e-14 84.3 205 37.6
MBI19_g11833_MAGBIO Magnolia biondii HOM05D002012 ORTHO05D001992 6.2e-14 82.0 201 36.3
Cpa.g.sc28.59 Carica papaya HOM05D002012 ORTHO05D001992 8.1e-14 81.6 155 40.6
Hund26019 Selenicereus undatus HOM05D002012 ORTHO05D001992 8.1e-14 81.6 200 33.0
MSTRG.26464 Avicennia marina HOM05D002012 ORTHO05D001992 1.1e-13 81.3 195 32.8
Lsat_1_v5_gn_4_76000 Lactuca sativa HOM05D002012 ORTHO05D001992 1.1e-13 81.3 86 50.0
PSO724G0857 Papaver somniferum HOM05D002012 ORTHO05D001992 2.4e-13 80.1 196 34.7
Lsat_1_v5_gn_4_111200 Lactuca sativa HOM05D002012 ORTHO05D001992 4.0e-13 79.3 99 46.5
MD02G1088900 Malus domestica HOM05D002012 ORTHO05D001992 4.0e-13 79.3 94 52.1
PSO135G0920 Papaver somniferum HOM05D002012 ORTHO05D001992 9.0e-13 78.2 196 33.2
Sc08g0008860 Simmondsia chinensis HOM05D002012 ORTHO05D001992 4.5e-12 75.9 201 34.3
Sc08g0009350 Simmondsia chinensis HOM05D002012 ORTHO05D001992 4.5e-12 75.9 201 34.3
SGA_v2.0_scaffold91G28092 Striga asiatica HOM05D002012 ORTHO05D001992 5.8e-12 75.5 211 34.6
Ca_21316_v3 Cicer arietinum L. HOM05D002012 ORTHO05D001992 2.9e-11 73.2 205 33.2
Lsat_1_v5_gn_5_141180 Lactuca sativa HOM05D002012 ORTHO05D001992 4.9e-11 72.4 114 40.4
Ah.09g231410 Amaranthus hybridus HOM05D002012 ORTHO05D001992 1.1e-10 71.2 199 35.2
Lj4g0000518 Lotus japonicus HOM05D002012 ORTHO05D001992 5.5e-10 68.9 154 34.4
ATR0598G305 Amborella trichopoda HOM05D002012 ORTHO05D001992 1.6e-09 67.4 200 31.5
Medtr4g125480 Medicago truncatula HOM05D002012 ORTHO05D001992 2.7e-09 66.6 76 47.4
HPP92_007985 Vanilla planifolia HOM05D002012 ORTHO05D001992 3.5e-09 66.2 196 31.6
Duzib168G1258 Durio zibethinus HOM05D002012 ORTHO05D001992 4.6e-09 65.9 55 63.6
Aqoxy7G04080 Aquilegia oxysepala HOM05D002012 ORTHO05D001992 7.9e-09 65.1 202 29.7
Lalb_Chr07g0181121 Lupinus albus HOM05D002012 ORTHO05D001992 3.0e-08 63.2 198 32.3
TPR.G9457 Trifolium pratense HOM05D002012 ORTHO05D001992 3.0e-08 63.2 72 45.8
Hund08733 Selenicereus undatus HOM05D002012 ORTHO05D001992 6.7e-08 62.0 192 35.4
Lsat_1_v5_gn_6_30540 Lactuca sativa HOM05D001207 ORTHO05D009015 1.9e-07 60.5 58 56.9
Psat4g017920 Pisum sativum HOM05D002012 ORTHO05D001992 9.6e-07 58.2 76 44.7
CDE06G1025 Ceratophyllum demersum HOM05D002012 ORTHO05D001992 3.7e-06 56.2 196 31.1
CDE07G0836 Ceratophyllum demersum HOM05D002012 ORTHO05D001992 8.2e-06 55.1 207 29.5


User provided reference genes

Program Settings