Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C268T3 Lonicera japonica HOM05D027184 ORTHO05D000012 2.1e-41 171.8 79 100.0
Lj9A250G10 Lonicera japonica HOM05D027184 ORTHO05D000012 1.4e-21 105.9 77 67.5
Lj9P244T11 Lonicera japonica HOM05D027184 ORTHO05D000012 1.8e-16 89.0 71 60.6
Lj9C215T7 Lonicera japonica HOM05D027184 ORTHO05D000012 1.5e-10 69.3 64 54.7
MD05G1140100 Malus domestica HOM05D000005 ORTHO05D000012 4.8e-09 64.3 72 41.7
CSS0037441 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 6.2e-09 63.9 66 40.9
CSS0022340 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.1e-08 63.2 57 43.9
FAN15G2828 Fragaria x ananassa HOM05D000005 ORTHO05D000012 4.0e-08 61.2 66 39.4
MD05G1152200 Malus domestica HOM05D000005 ORTHO05D000012 9.0e-08 60.1 47 53.2
RcHm_v2.0_Chr6g0281981 Rosa chinensis HOM05D000005 ORTHO05D000012 1.5e-07 59.3 53 43.4
CSS0009639 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 2.0e-07 58.9 66 43.9
FvH4_2g17330 Fragaria vesca HOM05D000005 ORTHO05D000012 2.0e-07 58.9 55 41.8
FvH4_2g17350 Fragaria vesca HOM05D000005 ORTHO05D000012 2.0e-07 58.9 55 41.8
FAN24G1899 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.0e-07 58.9 55 41.8
RcHm_v2.0_Chr6g0281951 Rosa chinensis HOM05D000005 ORTHO05D000012 2.6e-07 58.5 53 41.5
CSS0016030 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 3.4e-07 58.2 57 40.4
FAN27G2335 Fragaria x ananassa HOM05D000005 ORTHO05D000012 5.8e-07 57.4 66 37.9
FAN27G3393 Fragaria x ananassa HOM05D000005 ORTHO05D000012 7.6e-07 57.0 66 37.9
CSS0046783 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 9.9e-07 56.6 70 37.1
CSS0016728 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.3e-06 56.2 61 39.3
CSS0020094 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.3e-06 56.2 57 40.4
RcHm_v2.0_Chr1g0348381 Rosa chinensis HOM05D000005 ORTHO05D000012 1.7e-06 55.8 61 41.0
CSS0031517 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 2.9e-06 55.1 53 39.6
CSS0015970 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 3.8e-06 54.7 76 35.5
RcHm_v2.0_Chr1g0348411 Rosa chinensis HOM05D000005 ORTHO05D000012 3.8e-06 54.7 47 46.8
CSS0019233 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000294 4.9e-06 54.3 64 37.5
CSS0002987 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 6.4e-06 53.9 66 42.4
CSS0050220 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 6.4e-06 53.9 64 35.9
CSS0032356 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 8.4e-06 53.5 69 37.7
Dinv29687 Davidia involucrata HOM05D000005 ORTHO05D000012 8.4e-06 53.5 46 45.7
Dinv38450 Davidia involucrata HOM05D000005 ORTHO05D000012 8.4e-06 53.5 48 45.8
FAN06G2592 Fragaria x ananassa HOM05D000005 ORTHO05D000012 8.4e-06 53.5 55 43.6


User provided reference genes

Program Settings