Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C250G4 Lonicera japonica HOM05D000003 ORTHO05D000006 4.2e-49 197.6 91 100.0
QL08p004291 Quercus lobata HOM05D000003 ORTHO05D000006 2.9e-10 68.6 72 43.1
QL07p019949 Quercus lobata HOM05D000003 ORTHO05D000006 1.4e-09 66.2 72 43.1
Atru.chr1.1372 Acer truncatum HOM05D000003 ORTHO05D000006 1.9e-09 65.9 83 38.6
QL06p020564 Quercus lobata HOM05D000003 ORTHO05D000006 1.9e-09 65.9 68 44.1
Atru.chr13.2346 Acer truncatum HOM05D000003 ORTHO05D000004 2.5e-09 65.5 71 45.1
Atru.chr10.150 Acer truncatum HOM05D000003 ORTHO05D000004 4.2e-09 64.7 83 37.3
Atru.chr6.1886 Acer truncatum HOM05D000003 ORTHO05D000006 7.2e-09 63.9 68 39.7
Atru.chr4.252 Acer truncatum HOM05D000003 ORTHO05D000004 9.4e-09 63.5 71 43.7
QL01p035015 Quercus lobata HOM05D000003 ORTHO05D000006 9.4e-09 63.5 72 40.3
Atru.chr8.264 Acer truncatum HOM05D000003 ORTHO05D000004 1.6e-08 62.8 83 39.8
Atru.chr9.814 Acer truncatum HOM05D000003 ORTHO05D000006 1.6e-08 62.8 83 38.6
Manes.11G107251 Manihot esculenta HOM05D000003 ORTHO05D000006 1.6e-08 62.8 70 38.6
QL93p0151_0017 Quercus lobata HOM05D000003 ORTHO05D000006 1.6e-08 62.8 83 38.6
Atru.chr1.764 Acer truncatum HOM05D000003 ORTHO05D000006 2.1e-08 62.4 66 43.9
Atru.chr13.2020 Acer truncatum HOM05D000003 ORTHO05D000006 2.1e-08 62.4 83 38.6
Atru.chr6.1099 Acer truncatum HOM05D000003 ORTHO05D000006 2.1e-08 62.4 66 42.4
Manes.07G125402 Manihot esculenta HOM05D000003 ORTHO05D000006 4.7e-08 61.2 70 34.3
Atru.chr12.2231 Acer truncatum HOM05D000003 ORTHO05D000006 6.1e-08 60.8 68 44.1
Atru.chr6.1288 Acer truncatum HOM05D000003 ORTHO05D000004 6.1e-08 60.8 72 44.4
Atru.chr2.1933 Acer truncatum HOM05D000003 ORTHO05D000004 7.9e-08 60.5 83 36.1
Atru.chr7.397 Acer truncatum HOM05D000003 ORTHO05D000006 7.9e-08 60.5 83 38.6
FvH4_6g16753 Fragaria vesca HOM05D000003 ORTHO05D000006 7.9e-08 60.5 69 40.6
Atru.chr2.2470 Acer truncatum HOM05D000003 ORTHO05D000006 1.0e-07 60.1 71 39.4
CiPaw.01G042200 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.0e-07 60.1 73 35.6
QL08p005297 Quercus lobata HOM05D000003 ORTHO05D000006 1.8e-07 59.3 72 38.9
Atru.chr9.887 Acer truncatum HOM05D000003 ORTHO05D000006 3.0e-07 58.5 72 43.1
Atru.chr1.1557 Acer truncatum HOM05D000003 ORTHO05D000006 3.9e-07 58.2 71 40.8
Atru.chr11.265 Acer truncatum HOM05D000003 ORTHO05D000004 3.9e-07 58.2 71 42.3
Atru.chr13.1819 Acer truncatum HOM05D000003 ORTHO05D000006 3.9e-07 58.2 83 38.6
CiPaw.16G000200 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.9e-07 58.2 69 37.7
Atru.chr2.2868 Acer truncatum HOM05D000003 ORTHO05D000004 5.1e-07 57.8 71 39.4
Atru.chr2.48 Acer truncatum HOM05D000003 ORTHO05D000004 5.1e-07 57.8 66 43.9
Atru.chr3.2272 Acer truncatum HOM05D000003 ORTHO05D000004 5.1e-07 57.8 71 39.4
CANSAT35G1852 Cannabis sativa HOM05D000003 ORTHO05D000004 5.1e-07 57.8 66 42.4
CiPaw.16G004600 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.1e-07 57.8 69 37.7
Atru.chr10.299 Acer truncatum HOM05D000003 ORTHO05D000004 6.7e-07 57.4 71 40.8
CANSAT21G1448 Cannabis sativa HOM05D000003 ORTHO05D000006 6.7e-07 57.4 71 40.8
QL04p086004 Quercus lobata HOM05D000003 ORTHO05D000006 1.1e-06 56.6 72 37.5
TAR536G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000006 1.1e-06 56.6 63 44.4
Atru.chr3.1632 Acer truncatum HOM05D000003 ORTHO05D000006 1.5e-06 56.2 63 41.3
Atru.chr6.242 Acer truncatum HOM05D000003 ORTHO05D000006 1.5e-06 56.2 71 39.4
QL04p056296 Quercus lobata HOM05D000003 ORTHO05D000004 1.5e-06 56.2 72 40.3
TWI53G0004 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.5e-06 56.2 84 35.7
TWI75G0193 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.5e-06 56.2 82 35.4
Atru.chr13.1676 Acer truncatum HOM05D000003 ORTHO05D000006 2.0e-06 55.8 71 40.8
Atru.chr2.108 Acer truncatum HOM05D000003 ORTHO05D000004 2.0e-06 55.8 83 37.3
Atru.chr3.381 Acer truncatum HOM05D000003 ORTHO05D000006 2.0e-06 55.8 84 36.9
Atru.chr5.2264 Acer truncatum HOM05D000003 ORTHO05D000006 2.0e-06 55.8 62 43.5
Atru.chr13.2083 Acer truncatum HOM05D000003 ORTHO05D000006 2.6e-06 55.5 71 36.6
Atru.chr2.2283 Acer truncatum HOM05D000003 ORTHO05D000006 2.6e-06 55.5 71 42.3
Atru.chr5.1803 Acer truncatum HOM05D000003 ORTHO05D000006 2.6e-06 55.5 73 39.7
Atru.chr7.1503 Acer truncatum HOM05D000003 ORTHO05D000006 2.6e-06 55.5 71 39.4
QL02p097725 Quercus lobata HOM05D000003 ORTHO05D000004 2.6e-06 55.5 69 39.1
QL09p011339 Quercus lobata HOM05D000003 ORTHO05D000006 2.6e-06 55.5 54 46.3
CANSAT56G0006 Cannabis sativa HOM05D000003 ORTHO05D000006 3.3e-06 55.1 66 42.4
CANSAT80G2134 Cannabis sativa HOM05D000003 ORTHO05D000004 3.3e-06 55.1 73 32.9
QL02p056055 Quercus lobata HOM05D000003 ORTHO05D000126 3.3e-06 55.1 68 35.3
RcHm_v2.0_Chr1g0340391 Rosa chinensis HOM05D000003 ORTHO05D000004 3.3e-06 55.1 53 47.2
TWI31G1374 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 4.4e-06 54.7 84 35.7
AUR62027487 Chenopodium quinoa HOM05D000003 ORTHO05D000006 5.7e-06 54.3 72 30.6
CiPaw.11G121200 Carya illinoinensis HOM05D000003 ORTHO05D000006 7.4e-06 53.9 71 39.4
Atru.chr9.913 Acer truncatum HOM05D000003 ORTHO05D000004 9.7e-06 53.5 67 41.8
FvH4_4g08193 Fragaria vesca HOM05D000003 ORTHO05D000006 9.7e-06 53.5 81 35.8


User provided reference genes

Program Settings