Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C24T7 Lonicera japonica HOM05D003020 ORTHO05D003226 3.8e-126 454.9 237 100.0
Lj9A26T13 Lonicera japonica HOM05D003020 ORTHO05D003226 4.8e-121 438.0 237 97.9
Hma1.2p1_1025F.1_g249270 Hydrangea macrophylla HOM05D003020 ORTHO05D003226 8.9e-35 151.4 252 42.1
Dinv41250 Davidia involucrata HOM05D003020 ORTHO05D003226 2.1e-31 140.2 235 45.5
Oeu042166.1 Olea europaea HOM05D003020 ORTHO05D003226 3.0e-30 136.3 248 43.1
Lj9P685T21 Lonicera japonica HOM05D003020 ORTHO05D003226 4.3e-29 132.5 252 42.9
Haze_22098 Corylus avellana HOM05D003020 ORTHO05D003226 7.3e-29 131.7 250 40.8
Cfa013505 Carpinus fangiana HOM05D003020 ORTHO05D003226 2.8e-28 129.8 250 40.4
Actinidia04141 Actinidia chinensis HOM05D003020 ORTHO05D003226 3.6e-28 129.4 253 41.9
Cpa.g.sc95.49 Carica papaya HOM05D003020 ORTHO05D003226 8.1e-28 128.3 266 41.0
TAR625G0330 Trochodendron aralioides HOM05D003020 ORTHO05D003226 6.8e-27 125.2 250 41.6
MD13G1253900 Malus domestica HOM05D003020 ORTHO05D003226 8.9e-27 124.8 246 42.3
Dinv42724 Davidia involucrata HOM05D003020 ORTHO05D003226 7.6e-26 121.7 248 42.3
Dinv43377 Davidia involucrata HOM05D003020 ORTHO05D003226 7.6e-26 121.7 248 42.3
Oeu004196.1 Olea europaea HOM05D003020 ORTHO05D003226 7.6e-26 121.7 264 42.0
Prupe.1G086100 Prunus persica HOM05D003020 ORTHO05D003226 9.9e-26 121.3 253 41.9
Potri.006G168400 Populus trichocarpa HOM05D003020 ORTHO05D003226 4.9e-25 119.0 247 41.7
Lsat_1_v5_gn_7_54521 Lactuca sativa HOM05D003020 ORTHO05D003226 6.4e-25 118.6 236 41.1
Potri.018G092800 Populus trichocarpa HOM05D003020 ORTHO05D003226 1.1e-24 117.9 247 43.3
Lsat_1_v5_gn_5_84881 Lactuca sativa HOM05D003020 ORTHO05D003226 1.9e-24 117.1 246 39.8
CiPaw.07G192300 Carya illinoinensis HOM05D003020 ORTHO05D003226 2.4e-24 116.7 220 39.5
Thecc.09G173200 Theobroma cacao HOM05D003020 ORTHO05D003226 3.2e-24 116.3 251 39.4
CiPaw.08G036400 Carya illinoinensis HOM05D003020 ORTHO05D003226 4.1e-24 115.9 242 39.3
CiPaw.05G049400 Carya illinoinensis HOM05D003020 ORTHO05D003226 5.4e-24 115.5 219 39.7
Ca_21174_v3 Cicer arietinum L. HOM05D003020 ORTHO05D003226 5.4e-24 115.5 258 36.4
Ca_21223_v3 Cicer arietinum L. HOM05D003020 ORTHO05D003226 5.4e-24 115.5 258 36.4
FvH4_4g08220 Fragaria vesca HOM05D003020 ORTHO05D003226 5.4e-24 115.5 253 41.9
FAN12G0399 Fragaria x ananassa HOM05D003020 ORTHO05D003226 5.4e-24 115.5 253 41.9
Manes.14G153300 Manihot esculenta HOM05D003020 ORTHO05D003226 5.4e-24 115.5 247 40.1
ECA240G3460 Erigeron canadensis HOM05D003020 ORTHO05D003226 9.2e-24 114.8 263 38.0
Duzib168G2116 Durio zibethinus HOM05D003020 ORTHO05D003226 2.1e-23 113.6 269 37.5
Rhsim01G0004800 Rhododendron simsii HOM05D003020 ORTHO05D003226 4.6e-23 112.5 263 37.3
RcHm_v2.0_Chr4g0402471 Rosa chinensis HOM05D003020 ORTHO05D003226 4.6e-23 112.5 268 38.1
Duzib150G1089 Durio zibethinus HOM05D003020 ORTHO05D003226 6.0e-23 112.1 249 39.4
SalBow6G2220 Salvia bowleyana HOM05D003020 ORTHO05D003226 6.0e-23 112.1 244 41.0
ClCG06G013330 Citrullus lanatus HOM05D003020 ORTHO05D003226 7.8e-23 111.7 251 38.6
CsaV3_1G031590 Cucumis sativus L. HOM05D003020 ORTHO05D003226 7.8e-23 111.7 257 38.5
Medtr4g128160 Medicago truncatula HOM05D003020 ORTHO05D003226 7.8e-23 111.7 250 37.6
TAR636G2901 Trochodendron aralioides HOM05D003020 ORTHO05D003226 7.8e-23 111.7 261 36.4
Manes.14G153500 Manihot esculenta HOM05D003020 ORTHO05D003226 1.3e-22 110.9 243 39.1
MD16G1257900 Malus domestica HOM05D003020 ORTHO05D003226 1.7e-22 110.5 240 39.6
QL02p097728 Quercus lobata HOM05D003020 ORTHO05D003226 1.7e-22 110.5 257 38.9
Psat0s2889g0080 Pisum sativum HOM05D003020 ORTHO05D003226 2.3e-22 110.2 255 38.4
DCAR_014702 Daucus carota HOM05D003020 ORTHO05D003226 3.0e-22 109.8 236 38.6
FAN22G0428 Fragaria x ananassa HOM05D003020 ORTHO05D003226 5.1e-22 109.0 268 37.7
Sabra18G0080000 Salix brachista HOM05D003020 ORTHO05D003226 5.1e-22 109.0 222 44.1
FAN17G2997 Fragaria x ananassa HOM05D003020 ORTHO05D003226 6.6e-22 108.6 267 37.1
Glyma.17G063300 Glycine max HOM05D003020 ORTHO05D003226 6.6e-22 108.6 249 37.3
COL.COLO4_35897 Corchorus olitorius HOM05D003020 ORTHO05D003226 8.6e-22 108.2 271 37.6
FAN07G1960 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.5e-21 107.5 268 37.7
Gorai.004G031500 Gossypium raimondii HOM05D003020 ORTHO05D003226 2.5e-21 106.7 261 36.8
MSTRG.6214 Avicennia marina HOM05D003020 ORTHO05D003226 3.3e-21 106.3 203 41.4
MELO3C017464.2 Cucumis melo HOM05D003020 ORTHO05D003226 4.3e-21 105.9 250 37.6
VMungo1215G0012 Vigna mungo HOM05D003020 ORTHO05D003226 4.3e-21 105.9 249 36.9
CANSAT11G1249 Cannabis sativa HOM05D003020 ORTHO05D003226 7.3e-21 105.1 261 36.4
DCAR_017969 Daucus carota HOM05D003020 ORTHO05D003226 7.3e-21 105.1 246 38.2
Sed0024933 Sechium edule HOM05D003020 ORTHO05D003226 7.3e-21 105.1 240 37.9
Duzib170G0355 Durio zibethinus HOM05D003020 ORTHO05D003226 9.6e-21 104.8 249 38.2
HanXRQChr09g0244991 Helianthus annuus HOM05D003020 ORTHO05D003226 9.6e-21 104.8 285 34.7
Migut.J01478 Erythranthe guttata HOM05D003020 ORTHO05D003226 1.2e-20 104.4 244 38.1
Sed0018084 Sechium edule HOM05D003020 ORTHO05D003226 1.6e-20 104.0 241 37.8
Eucgr.C02308 Eucalyptus grandis HOM05D003020 ORTHO05D003226 4.7e-20 102.4 254 38.2
Gohir.D08G033900 Gossypium hirsutum HOM05D003020 ORTHO05D003226 4.7e-20 102.4 261 36.8
Oeu025224.1 Olea europaea HOM05D003020 ORTHO05D003226 6.2e-20 102.1 255 33.3
Gohir.D08G094000 Gossypium hirsutum HOM05D003020 ORTHO05D003226 8.1e-20 101.7 254 36.2
Lj4g0004544 Lotus japonicus HOM05D003020 ORTHO05D003226 1.1e-19 101.3 249 34.5
Glyma.20G083700 Glycine max HOM05D003020 ORTHO05D003226 1.4e-19 100.9 270 34.4
Phvul.003G146000 Phaseolus vulgaris HOM05D003020 ORTHO05D003226 3.1e-19 99.8 243 37.4
Lalb_Chr12g0199391 Lupinus albus HOM05D003020 ORTHO05D003226 5.2e-19 99.0 264 35.2
Gohir.A08G084400 Gossypium hirsutum HOM05D003020 ORTHO05D003226 6.8e-19 98.6 254 35.0
Atru.chr7.633 Acer truncatum HOM05D003020 ORTHO05D003226 1.2e-18 97.8 266 33.5
Gohir.A08G023400 Gossypium hirsutum HOM05D003020 ORTHO05D003226 1.5e-18 97.4 249 35.7
Thhalv10026023m.g Eutrema salsugineum HOM05D003020 ORTHO05D003226 2.0e-18 97.1 242 37.6
TPR.G5404 Trifolium pratense HOM05D003020 ORTHO05D003226 2.0e-18 97.1 281 33.8
TAR383G0698 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.4e-18 96.3 260 34.2
Sabra06G0129900 Salix brachista HOM05D003020 ORTHO05D003226 9.9e-18 94.7 200 41.5
Eucgr.C00156 Eucalyptus grandis HOM05D003020 ORTHO05D003226 1.3e-17 94.4 252 35.3
ECA234G3857 Erigeron canadensis HOM05D003020 ORTHO05D003226 1.7e-17 94.0 262 34.7
Sp7g28110 Schrenkiella parvula HOM05D003020 ORTHO05D003226 2.9e-17 93.2 235 37.9
TAR383G0645 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.8e-17 92.8 250 34.0
Ciclev10010819m.g Citrus clementina HOM05D003020 ORTHO05D003226 1.4e-16 90.9 276 33.7
Manes.14G153400 Manihot esculenta HOM05D003020 ORTHO05D003226 1.9e-16 90.5 238 36.1
THA.LOC104803497 Tarenaya hassleriana HOM05D003020 ORTHO05D003226 1.9e-16 90.5 251 34.3
TAR383G0860 Trochodendron aralioides HOM05D003020 ORTHO05D003226 7.1e-16 88.6 263 33.8
Aqoxy7G03070 Aquilegia oxysepala HOM05D003020 ORTHO05D003226 9.3e-16 88.2 248 33.9
Aa31LG2G20290 Aethionema arabicum HOM05D003020 ORTHO05D003226 1.6e-15 87.4 234 32.1
PGR102G0964 Punica granatum HOM05D003020 ORTHO05D003226 1.6e-15 87.4 287 33.4
Lalb_Chr07g0180461 Lupinus albus HOM05D003020 ORTHO05D003226 2.1e-15 87.0 240 33.8
AT4G30230 Arabidopsis thaliana HOM05D003020 ORTHO05D003226 2.7e-15 86.7 257 35.0
AL7G21920 Arabidopsis lyrata HOM05D003020 ORTHO05D003226 4.6e-15 85.9 255 34.5
CARHR238140 Cardamine hirsuta HOM05D003020 ORTHO05D003226 6.0e-15 85.5 207 36.2
A01p07910 Brassica napus HOM05D003020 ORTHO05D003226 7.8e-15 85.1 239 34.3
BraA01t00737Z Brassica rapa HOM05D003020 ORTHO05D003226 7.8e-15 85.1 239 34.3
THA.LOC104819978 Tarenaya hassleriana HOM05D003020 ORTHO05D003226 1.7e-14 84.0 252 32.1
Carub.0007s1038 Capsella rubella HOM05D003020 ORTHO05D003226 2.3e-14 83.6 259 33.2
BcaNung03008 Brassica carinata HOM05D003020 ORTHO05D003226 3.0e-14 83.2 236 34.3
C07p57710 Brassica napus HOM05D003020 ORTHO05D003226 3.3e-13 79.7 236 34.3
BolC7t46232H Brassica oleracea HOM05D003020 ORTHO05D003226 3.3e-13 79.7 236 34.3
TWI63G1498 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 5.6e-13 79.0 248 33.1
Nn2g12774 Nelumbo nucifera HOM05D003020 ORTHO05D003226 7.3e-13 78.6 251 32.3
BraA03t15021Z Brassica rapa HOM05D003020 ORTHO05D003226 2.8e-12 76.6 245 33.1
BcaC09g51805 Brassica carinata HOM05D003020 ORTHO05D003226 3.6e-12 76.3 243 32.5
C01p08830 Brassica napus HOM05D003020 ORTHO05D003226 3.6e-12 76.3 243 32.5
BolC1t00873H Brassica oleracea HOM05D003020 ORTHO05D003226 3.6e-12 76.3 243 32.5
A03p59690 Brassica napus HOM05D003020 ORTHO05D003226 6.2e-12 75.5 242 32.6
Ciclev10010534m.g Citrus clementina HOM05D003020 ORTHO05D003226 1.8e-11 73.9 259 32.8
TAR626G0085 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.8e-11 73.9 247 32.4
Migut.K00242 Erythranthe guttata HOM05D003020 ORTHO05D003226 6.9e-11 72.0 256 31.6
TAR626G1849 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.2e-10 71.2 248 32.7
Gorai.004G099800 Gossypium raimondii HOM05D003020 ORTHO05D003226 1.5e-10 70.9 173 34.7
SGA_v2.0_scaffold17G07929 Striga asiatica HOM05D003020 ORTHO05D003226 2.6e-10 70.1 249 31.7
TWI34G0269 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 1.1e-08 64.7 240 31.2
AUR62021300 Chenopodium quinoa HOM05D003020 ORTHO05D003226 2.4e-08 63.5 186 34.9
TAR383G0288 Trochodendron aralioides HOM05D003020 ORTHO05D003226 9.3e-08 61.6 260 31.2
AUR62033218 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.7e-07 60.1 213 34.3
PGR044G1634 Punica granatum HOM05D003020 ORTHO05D003226 2.7e-07 60.1 203 28.6
ClCG09G020480 Citrullus lanatus HOM05D003020 ORTHO05D003226 4.6e-07 59.3 214 29.0
Dinv31354 Davidia involucrata HOM05D003020 ORTHO05D003226 1.0e-06 58.2 245 29.8
Prupe.2G217400 Prunus persica HOM05D003020 ORTHO05D003226 1.7e-06 57.4 220 29.5
Sabra10G0168900 Salix brachista HOM05D003020 ORTHO05D003226 1.7e-06 57.4 222 26.1
MBI14_g17368_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D000358 3.0e-06 56.6 253 26.9
MBI16_g41356_MAGBIO Magnolia biondii HOM05D003020 ORTHO05D003226 5.1e-06 55.8 215 29.8
Ah.09g229890 Amaranthus hybridus HOM05D003020 ORTHO05D003226 6.6e-06 55.5 256 28.9
MBI16_g42581_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D003226 6.6e-06 55.5 215 28.8
EL10Ac8g18285 Beta vulgaris HOM05D003020 ORTHO05D003226 8.7e-06 55.1 145 36.6


User provided reference genes

Program Settings