Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C199G4 Lonicera japonica HOM05D046992 ORTHO05D235476 1.6e-68 263.5 231 100.0
Lj9C195T1 Lonicera japonica HOM05D046992 ORTHO05D235788 4.0e-64 248.8 231 94.8
Lsat_1_v5_gn_1_52240 Lactuca sativa HOM05D000473 ORTHO05D001219 2.1e-12 77.0 132 50.0
Lj3C985T0 Lonicera japonica HOM05D000473 ORTHO05D001219 3.9e-11 72.8 115 40.9
Ciclev10012227m.g Citrus clementina HOM05D000473 ORTHO05D001219 9.7e-10 68.2 117 47.9
Medtr0041s0140 Medicago truncatula HOM05D000473 ORTHO05D001219 9.7e-10 68.2 116 42.2
Medtr7g101930 Medicago truncatula HOM05D000473 ORTHO05D001219 9.7e-10 68.2 116 42.2
Peaxi162Scf00311g01111 Petunia axillaris HOM05D000473 ORTHO05D001219 1.6e-09 67.4 116 37.9
Lj2A121T43 Lonicera japonica HOM05D000473 ORTHO05D001219 2.2e-09 67.0 145 37.9
HanXRQChr14g0454431 Helianthus annuus HOM05D000473 ORTHO05D001219 2.8e-09 66.6 118 41.5
Oeu045227.1 Olea europaea HOM05D000473 ORTHO05D001219 2.8e-09 66.6 118 48.3
Nitab4.5_0003524g0040 Nicotiana tabacum HOM05D000473 ORTHO05D001219 4.8e-09 65.9 118 40.7
Oeu016984.1 Olea europaea HOM05D000473 ORTHO05D001219 6.3e-09 65.5 120 45.0
Sopen10g035670 Solanum pennellii HOM05D000473 ORTHO05D001219 8.2e-09 65.1 135 43.0
Actinidia32492 Actinidia chinensis HOM05D000473 ORTHO05D001219 1.1e-08 64.7 81 44.4
BraA10t45295Z Brassica rapa HOM05D000473 ORTHO05D001219 2.4e-08 63.5 129 39.5
C09p73400 Brassica napus HOM05D000473 ORTHO05D001219 4.1e-08 62.8 132 42.4
HanXRQChr01g0027741 Helianthus annuus HOM05D000473 ORTHO05D001219 4.1e-08 62.8 135 37.8
TAR636G1881 Trochodendron aralioides HOM05D000473 ORTHO05D001219 5.3e-08 62.4 61 52.5
BcaC06g32055 Brassica carinata HOM05D000473 ORTHO05D001219 6.9e-08 62.0 132 43.2
BolC9t60076H Brassica oleracea HOM05D000473 ORTHO05D001219 6.9e-08 62.0 132 43.2
A10p32600 Brassica napus HOM05D000473 ORTHO05D001219 1.2e-07 61.2 129 38.8
Ca_08860_v3 Cicer arietinum L. HOM05D000473 ORTHO05D001219 1.2e-07 61.2 114 47.4
THA.LOC104826913 Tarenaya hassleriana HOM05D000473 ORTHO05D001219 1.2e-07 61.2 80 47.5
MSTRG.5762 Avicennia marina HOM05D000473 ORTHO05D001219 1.5e-07 60.8 126 42.1
Dinv37317 Davidia involucrata HOM05D000473 ORTHO05D001219 2.0e-07 60.5 130 36.9
Gohir.D09G142200 Gossypium hirsutum HOM05D000473 ORTHO05D001219 2.0e-07 60.5 110 49.1
Rhsim03G0091900 Rhododendron simsii HOM05D000473 ORTHO05D001219 2.6e-07 60.1 65 52.3
CSS0047326 Camellia sinensis var. sinensis HOM05D000473 ORTHO05D001219 3.4e-07 59.7 67 49.3
CAN.G501.1 Capsicum annuum HOM05D000473 ORTHO05D001219 3.4e-07 59.7 144 35.4
Peaxi162Scf00638g00210 Petunia axillaris HOM05D000473 ORTHO05D001219 3.4e-07 59.7 156 34.6
Aa31LG1G21760 Aethionema arabicum HOM05D000473 ORTHO05D001219 5.9e-07 58.9 134 35.8
Peaxi162Scf00488g00011 Petunia axillaris HOM05D000473 ORTHO05D001219 5.9e-07 58.9 117 40.2
Nitab4.5_0017306g0010 Nicotiana tabacum HOM05D000473 ORTHO05D001219 7.7e-07 58.5 134 38.1
AT5G03380 Arabidopsis thaliana HOM05D000473 ORTHO05D001219 1.3e-06 57.8 57 50.9
CANSAT80G2299 Cannabis sativa HOM05D000473 ORTHO05D001219 1.3e-06 57.8 101 41.6
Actinidia28905 Actinidia chinensis HOM05D000473 ORTHO05D001219 1.7e-06 57.4 57 52.6
AL6G12710 Arabidopsis lyrata HOM05D000473 ORTHO05D001219 1.7e-06 57.4 77 44.2
BcaC02g07567 Brassica carinata HOM05D000473 ORTHO05D001219 2.9e-06 56.6 99 39.4
CAN.G900.31 Capsicum annuum HOM05D000473 ORTHO05D001219 2.9e-06 56.6 132 32.6
Dinv35788 Davidia involucrata HOM05D000473 ORTHO05D001219 2.9e-06 56.6 52 51.9
Gohir.A09G146500 Gossypium hirsutum HOM05D000473 ORTHO05D001219 2.9e-06 56.6 108 43.5
Sopen09g003000 Solanum pennellii HOM05D000473 ORTHO05D001219 2.9e-06 56.6 162 31.5
TAR633G0168 Trochodendron aralioides HOM05D000473 ORTHO05D001219 2.9e-06 56.6 62 45.2
Duzib106G1895 Durio zibethinus HOM05D000473 ORTHO05D001219 3.8e-06 56.2 58 50.0
Gohir.D04G110600 Gossypium hirsutum HOM05D000473 ORTHO05D001219 3.8e-06 56.2 58 48.3
BcaB01g05841 Brassica carinata HOM05D000473 ORTHO05D001219 5.0e-06 55.8 94 40.4
BolC3t12703H Brassica oleracea HOM05D000473 ORTHO05D001219 5.0e-06 55.8 94 40.4
Duzib128G1412 Durio zibethinus HOM05D000473 ORTHO05D001219 5.0e-06 55.8 58 50.0
Sabra06G0098500 Salix brachista HOM05D000473 ORTHO05D001219 5.0e-06 55.8 77 45.5
Thecc.05G067000 Theobroma cacao HOM05D000473 ORTHO05D001219 5.0e-06 55.8 63 49.2
BolC4t28050H Brassica oleracea HOM05D000473 ORTHO05D001219 6.5e-06 55.5 99 38.4
Ca_11504_v3 Cicer arietinum L. HOM05D000473 ORTHO05D001219 6.5e-06 55.5 56 51.8
Haze_20542 Corylus avellana HOM05D000473 ORTHO05D001219 6.5e-06 55.5 76 46.1
Gohir.A04G072100 Gossypium hirsutum HOM05D000473 ORTHO05D001219 6.5e-06 55.5 58 46.6
Gorai.009G414800 Gossypium raimondii HOM05D000473 ORTHO05D001219 6.5e-06 55.5 58 48.3
Nitab4.5_0008928g0030 Nicotiana tabacum HOM05D000473 ORTHO05D001219 6.5e-06 55.5 150 32.7
CiPaw.09G172300 Carya illinoinensis HOM05D000473 ORTHO05D001219 8.5e-06 55.1 52 51.9
Duzib093G1252 Durio zibethinus HOM05D000473 ORTHO05D001219 8.5e-06 55.1 58 46.6
HanXRQChr13g0401031 Helianthus annuus HOM05D000473 ORTHO05D001219 8.5e-06 55.1 77 45.5
Sp6g22380 Schrenkiella parvula HOM05D000473 ORTHO05D001219 8.5e-06 55.1 110 39.1
PGSC0003DMG400003887 Solanum tuberosum HOM05D000473 ORTHO05D001219 8.5e-06 55.1 51 49.0


User provided reference genes

Program Settings