Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 7.4e-109 397.1 189 100.0
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 1.5e-88 329.7 171 88.3
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 5.2e-86 321.2 180 82.8
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.1e-83 312.0 190 77.9
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 4.1e-83 311.6 171 83.6
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 5.4e-83 311.2 178 81.5
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 7.0e-83 310.8 171 84.2
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.6e-82 309.7 181 80.7
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.5e-82 308.5 180 80.6
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 6.6e-81 304.3 177 80.8
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 8.6e-81 303.9 171 82.5
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 1.9e-80 302.8 171 78.9
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 2.5e-80 302.4 177 78.0
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 5.5e-80 301.2 171 81.3
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 5.5e-80 301.2 171 81.3
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 5.5e-80 301.2 174 80.5
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 7.2e-80 300.8 171 80.1
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 2.1e-79 299.3 171 79.5
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 2.1e-79 299.3 167 80.8
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 2.8e-79 298.9 175 78.3
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 3.6e-79 298.5 171 78.9
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 3.6e-79 298.5 171 80.7
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 6.1e-79 297.7 166 81.3
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 6.1e-79 297.7 177 76.8
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 6.1e-79 297.7 167 80.8
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 8.0e-79 297.4 171 78.4
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 8.0e-79 297.4 171 79.5
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 1.0e-78 297.0 171 78.9
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 1.4e-78 296.6 171 80.7
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 1.8e-78 296.2 171 78.9
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 3.0e-78 295.4 179 77.1
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 3.0e-78 295.4 173 80.9
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 5.2e-78 294.7 178 76.4
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 5.2e-78 294.7 176 76.7
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 5.2e-78 294.7 172 78.5
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 6.8e-78 294.3 172 76.7
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 8.9e-78 293.9 167 79.6
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 2.6e-77 292.4 168 81.0
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 4.4e-77 291.6 172 79.1
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 4.4e-77 291.6 171 78.4
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 4.4e-77 291.6 166 80.7
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 5.7e-77 291.2 172 79.1
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 9.8e-77 290.4 171 79.5
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 1.3e-76 290.0 181 71.8
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 2.2e-76 289.3 172 75.6
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 2.8e-76 288.9 166 80.1
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 2.8e-76 288.9 171 77.8
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 3.7e-76 288.5 194 71.1
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 6.3e-76 287.7 171 76.0
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 6.3e-76 287.7 171 78.9
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 6.3e-76 287.7 179 72.6
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 8.3e-76 287.3 171 75.4
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 1.4e-75 286.6 171 74.3
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 1.4e-75 286.6 172 73.3
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 1.8e-75 286.2 171 76.6
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 3.1e-75 285.4 179 72.6
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 3.1e-75 285.4 172 75.6
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 5.4e-75 284.6 171 76.0
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 7.0e-75 284.3 172 73.8
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 9.2e-75 283.9 172 77.3
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 1.2e-74 283.5 172 77.9
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.6e-74 283.1 172 73.3
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 2.0e-74 282.7 172 73.3
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 2.7e-74 282.3 172 73.3
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 7.8e-74 280.8 171 76.6
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 7.8e-74 280.8 172 74.4
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 1.0e-73 280.4 171 73.1
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 1.0e-73 280.4 171 74.3
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 1.3e-73 280.0 171 76.6
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 1.3e-73 280.0 171 74.3
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 2.9e-73 278.9 179 74.9
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 2.9e-73 278.9 171 75.4
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 2.9e-73 278.9 171 76.6
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 3.8e-73 278.5 162 79.6
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 5.0e-73 278.1 172 72.7
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 5.0e-73 278.1 171 75.4
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 8.6e-73 277.3 171 76.0
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 8.6e-73 277.3 171 75.4
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 1.1e-72 276.9 171 75.4
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 3.3e-72 275.4 171 75.4
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 3.3e-72 275.4 171 75.4
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 5.6e-72 274.6 176 76.1
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 3.6e-71 271.9 147 83.7
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 8.0e-71 270.8 171 71.9
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 8.0e-71 270.8 171 71.9
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 2.3e-70 269.2 171 71.9
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 5.2e-70 268.1 177 70.6
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 1.5e-69 266.5 171 73.1
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 2.6e-69 265.8 179 70.9
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 5.8e-69 264.6 171 69.6
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 5.8e-69 264.6 174 70.1
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 3.5e-66 255.4 177 68.9
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 1.0e-65 253.8 142 80.3
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 3.9e-65 251.9 141 79.4
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 1.5e-64 250.0 139 81.3
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 2.1e-63 246.1 174 64.9
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 8.9e-62 240.7 174 63.2
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 1.2e-58 230.3 174 59.2
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 7.8e-58 227.6 176 61.9
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 1.3e-57 226.9 172 64.0
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 6.6e-57 224.6 172 63.4
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 1.3e-52 210.3 172 61.0
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 3.5e-50 202.2 172 58.1
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 6.6e-49 198.0 169 56.8
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 1.5e-48 196.8 163 60.7
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 1.8e-46 189.9 169 54.4
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 3.1e-46 189.1 171 58.5
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 8.1e-39 164.5 140 57.9
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.4e-38 163.7 98 73.5
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 3.1e-38 162.5 97 75.3
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 9.3e-35 151.0 188 43.6
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 2.1e-34 149.8 184 45.7
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 4.6e-34 148.7 154 50.6
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 3.0e-25 119.4 71 81.7
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 7.1e-19 98.2 66 72.7
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 1.5e-13 80.5 49 73.5
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 7.6e-13 78.2 58 60.3


User provided reference genes

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