Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A719G52 Lonicera japonica HOM05D007038 ORTHO05D008893 1.7e-205 719.2 368 100.0
Dinv42838 Davidia involucrata HOM05D007038 ORTHO05D008893 1.5e-137 493.4 384 69.8
Dinv43261 Davidia involucrata HOM05D007038 ORTHO05D008893 9.3e-132 474.2 362 71.3
CSS0015539 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 2.5e-124 449.5 386 64.8
Actinidia23561 Actinidia chinensis HOM05D007038 ORTHO05D008893 9.3e-124 447.6 384 64.3
QL02p093776 Quercus lobata HOM05D007038 ORTHO05D008893 1.6e-123 446.8 382 65.7
GSVIVG01023636001 Vitis vinifera HOM05D007038 ORTHO05D008893 6.0e-123 444.9 368 63.9
Atru.chr7.996 Acer truncatum HOM05D007038 ORTHO05D008893 5.1e-122 441.8 367 65.4
CSS0013222 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 1.5e-121 440.3 385 63.9
MD15G1150700 Malus domestica HOM05D007038 ORTHO05D008893 1.2e-118 430.6 381 63.8
RcHm_v2.0_Chr2g0085451 Rosa chinensis HOM05D007038 ORTHO05D008893 3.4e-118 429.1 380 62.9
TAR626G0465 Trochodendron aralioides HOM05D007038 ORTHO05D008893 3.4e-118 429.1 369 62.9
Manes.06G033300 Manihot esculenta HOM05D007038 ORTHO05D008893 7.6e-118 427.9 365 62.5
CiPaw.16G107900 Carya illinoinensis HOM05D007038 ORTHO05D008893 3.8e-117 425.6 365 64.4
Cfa020806 Carpinus fangiana HOM05D007038 ORTHO05D008893 5.5e-116 421.8 381 62.2
FvH4_1g00730 Fragaria vesca HOM05D007038 ORTHO05D008893 1.6e-115 420.2 361 63.4
FAN28G0561 Fragaria x ananassa HOM05D007038 ORTHO05D008893 4.6e-115 418.7 382 60.5
TWI63G0746 Tripterygium wilfordii HOM05D007038 ORTHO05D008893 4.6e-115 418.7 377 61.5
ECA234G0501 Erigeron canadensis HOM05D007038 ORTHO05D008893 6.7e-114 414.8 366 63.1
Gohir.A13G206700 Gossypium hirsutum HOM05D007038 ORTHO05D008893 6.7e-114 414.8 377 60.7
Gorai.013G241400 Gossypium raimondii HOM05D007038 ORTHO05D008893 1.9e-113 413.3 377 60.5
Lj4g0021787 Lotus japonicus HOM05D007038 ORTHO05D008893 5.7e-113 411.8 370 62.4
Sopen07g001900 Solanum pennellii HOM05D007038 ORTHO05D008893 7.4e-113 411.4 400 56.8
PGSC0003DMG400011195 Solanum tuberosum HOM05D007038 ORTHO05D008893 6.9e-111 404.8 419 54.4
FAN23G2273 Fragaria x ananassa HOM05D007038 ORTHO05D008893 2.0e-110 403.3 389 60.2
Prupe.7G265000 Prunus persica HOM05D007038 ORTHO05D008893 1.7e-109 400.2 383 60.6
arahy.Tifrunner.gnm1.ann1.2821YK Arachis hypogaea HOM05D007038 ORTHO05D008893 2.2e-109 399.8 370 58.6
FAN23G1724 Fragaria x ananassa HOM05D007038 ORTHO05D008893 3.8e-109 399.1 392 59.4
Lsat_1_v5_gn_5_89520 Lactuca sativa HOM05D007038 ORTHO05D008893 1.1e-108 397.5 389 58.4
Medtr4g130580 Medicago truncatula HOM05D007038 ORTHO05D008893 1.1e-108 397.5 369 58.3
TPR.G24832 Trifolium pratense HOM05D007038 ORTHO05D008893 2.5e-108 396.4 376 57.4
Sc14g0000940 Simmondsia chinensis HOM05D007038 ORTHO05D008893 7.2e-108 394.8 361 56.0
arahy.Tifrunner.gnm1.ann1.ULM9BE Arachis hypogaea HOM05D007038 ORTHO05D008893 9.4e-108 394.4 371 58.5
VMungo1215G2991 Vigna mungo HOM05D007038 ORTHO05D008893 1.6e-107 393.7 374 58.6
Rhsim03G0258100 Rhododendron simsii HOM05D007038 ORTHO05D008893 3.6e-107 392.5 416 55.3
CANSAT11G2324 Cannabis sativa HOM05D007038 ORTHO05D008893 6.1e-107 391.7 356 60.4
Nn8g39966 Nelumbo nucifera HOM05D007038 ORTHO05D008893 7.9e-107 391.3 373 58.7
Glyma.02G205400 Glycine max HOM05D007038 ORTHO05D008893 1.8e-106 390.2 367 58.6
Glyma.17G072600 Glycine max HOM05D007038 ORTHO05D008893 2.6e-105 386.3 368 57.9
HanXRQChr16g0520471 Helianthus annuus HOM05D007038 ORTHO05D008893 8.2e-104 381.3 429 52.4
Migut.J01371 Erythranthe guttata HOM05D007038 ORTHO05D008893 5.3e-103 378.6 333 59.2
DCAR_019405 Daucus carota HOM05D007038 ORTHO05D008893 3.8e-101 372.5 317 61.8
PGR102G3121 Punica granatum HOM05D007038 ORTHO05D008893 4.2e-100 369.0 385 52.5
Psat0s3930g0120 Pisum sativum HOM05D007038 ORTHO05D008893 5.7e-97 358.6 346 56.6
SalBow1G2783 Salvia bowleyana HOM05D007038 ORTHO05D008893 7.4e-97 358.2 390 52.1
Sed0007561 Sechium edule HOM05D007038 ORTHO05D008893 7.4e-97 358.2 379 52.5
Lalb_Chr13g0300771 Lupinus albus HOM05D007038 ORTHO05D008893 1.7e-96 357.1 367 55.9
Sabra06G0139000 Salix brachista HOM05D007038 ORTHO05D008893 2.8e-96 356.3 475 45.9
Eucgr.C02504 Eucalyptus grandis HOM05D007038 ORTHO05D008893 1.8e-95 353.6 367 52.9
Aqoxy7G03364 Aquilegia oxysepala HOM05D007038 ORTHO05D008893 3.1e-95 352.8 353 55.8
C02p13780 Brassica napus HOM05D007038 ORTHO05D008893 3.1e-95 352.8 372 50.8
BolC2t07497H Brassica oleracea HOM05D007038 ORTHO05D008893 3.1e-95 352.8 372 50.8
Thhalv10015603m.g Eutrema salsugineum HOM05D007038 ORTHO05D008893 3.5e-94 349.4 377 49.9
Cpa.g.sc46.174 Carica papaya HOM05D007038 ORTHO05D008893 1.0e-93 347.8 363 53.2
Hund08926 Selenicereus undatus HOM05D007038 ORTHO05D008893 1.9e-92 343.6 401 50.9
ClCG02G014390 Citrullus lanatus HOM05D007038 ORTHO05D008893 2.5e-92 343.2 412 48.5
PSO063G4531 Papaver somniferum HOM05D007038 ORTHO05D008893 4.2e-92 342.4 369 53.9
AL8G33930 Arabidopsis lyrata HOM05D007038 ORTHO05D008893 4.7e-91 339.0 376 49.7
Carub.0008s1841 Capsella rubella HOM05D007038 ORTHO05D008893 1.0e-90 337.8 380 49.5
Duzib150G1077 Durio zibethinus HOM05D007038 ORTHO05D008893 1.0e-90 337.8 353 55.0
Ciclev10009099m.g Citrus clementina HOM05D007038 ORTHO05D008893 1.8e-90 337.0 288 61.8
CARHR271660 Cardamine hirsuta HOM05D007038 ORTHO05D008893 2.3e-90 336.7 383 48.3
HanXRQChr16g0520451 Helianthus annuus HOM05D007038 ORTHO05D008893 8.8e-90 334.7 347 53.3
Phvul.003G155000 Phaseolus vulgaris HOM05D007038 ORTHO05D008893 1.2e-89 334.3 320 57.2
THA.LOC104811831 Tarenaya hassleriana HOM05D007038 ORTHO05D008893 1.5e-89 334.0 368 50.0
AT5G57880 Arabidopsis thaliana HOM05D007038 ORTHO05D008893 3.3e-89 332.8 376 48.9
EL10Ac8g18937 Beta vulgaris HOM05D007038 ORTHO05D008893 4.4e-89 332.4 373 50.1
FAN26G1014 Fragaria x ananassa HOM05D007038 ORTHO05D008893 3.7e-88 329.3 366 54.4
SGA_v2.0_scaffold265G46092 Striga asiatica HOM05D007038 ORTHO05D008893 4.1e-87 325.9 383 49.9
Haze_19163 Corylus avellana HOM05D007038 ORTHO05D008893 7.0e-87 325.1 405 49.6
Cc06_g14750 Coffea canephora HOM05D007038 ORTHO05D008893 1.7e-85 320.5 325 54.5
A10p15240 Brassica napus HOM05D007038 ORTHO05D008893 3.8e-85 319.3 401 44.9
BcaC04g19921 Brassica carinata HOM05D007038 ORTHO05D008893 1.5e-84 317.4 420 44.0
BcaB05g22382 Brassica carinata HOM05D007038 ORTHO05D008893 9.4e-84 314.7 388 47.4
A02p08130 Brassica napus HOM05D007038 ORTHO05D008893 3.6e-83 312.8 375 46.7
Aa31LG3G13710 Aethionema arabicum HOM05D007038 ORTHO05D008893 4.7e-83 312.4 384 45.8
BraA02t05887Z Brassica rapa HOM05D007038 ORTHO05D008893 6.1e-83 312.0 374 46.8
vmacro06062 Vaccinium macrocarpon HOM05D007038 ORTHO05D008893 2.3e-82 310.1 360 54.2
Nitab4.5_0002724g0040 Nicotiana tabacum HOM05D007038 ORTHO05D008893 3.0e-82 309.7 455 43.3
C09p49760 Brassica napus HOM05D007038 ORTHO05D008893 1.2e-81 307.8 395 44.6
BraA10t43606Z Brassica rapa HOM05D007038 ORTHO05D008893 1.5e-81 307.4 402 44.8
Os08g0555800 Oryza sativa ssp. japonica HOM05D007038 ORTHO05D008893 2.2e-80 303.5 362 47.2
MBI14_g09472_MAGBIO Magnolia biondii HOM05D007038 ORTHO05D008893 1.2e-78 297.7 321 53.0
ATR0019G005 Amborella trichopoda HOM05D007038 ORTHO05D008893 2.0e-78 297.0 374 46.5
Thecc.09G151200 Theobroma cacao HOM05D007038 ORTHO05D008893 7.7e-78 295.0 281 58.7
Ca_21139_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 2.1e-75 287.0 305 54.4
Ca_21144_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 2.1e-75 287.0 305 54.4
Zm00001eb180360 Zea mays HOM05D007038 ORTHO05D008893 2.8e-75 286.6 370 45.9
BolC9t57827H Brassica oleracea HOM05D007038 ORTHO05D008893 4.7e-75 285.8 447 39.6
Gohir.D13G211300 Gossypium hirsutum HOM05D007038 ORTHO05D008893 3.5e-62 243.0 295 50.8
AUR62028347 Chenopodium quinoa HOM05D007038 ORTHO05D008893 7.8e-62 241.9 362 42.5
Nitab4.5_0002320g0050 Nicotiana tabacum HOM05D001418 ORTHO05D002038 1.0e-61 241.5 428 39.7
AUR62025344 Chenopodium quinoa HOM05D007038 ORTHO05D008893 1.5e-60 237.7 373 41.6
Solyc07g005790.4 Solanum lycopersicum HOM05D007038 ORTHO05D008893 1.1e-52 211.5 181 58.6
unitig_46.g18476 Utricularia gibba HOM05D007038 ORTHO05D008893 1.9e-52 210.7 254 48.0
Potri.006G182301 Populus trichocarpa HOM05D007038 ORTHO05D008893 1.8e-50 204.1 173 59.5
CsaV3_2G007610 Cucumis sativus L. HOM05D007038 ORTHO05D008893 3.2e-47 193.4 300 43.3
Solyc07g005800.2 Solanum lycopersicum HOM05D007038 ORTHO05D008893 3.2e-47 193.4 171 63.2
Peaxi162Scf00401g00326 Petunia axillaris HOM05D007038 ORTHO05D008893 3.5e-46 189.9 185 58.9
CAN.G160.33 Capsicum annuum HOM05D007038 ORTHO05D008893 1.7e-45 187.6 161 57.8
Peaxi162Scf00401g00327 Petunia axillaris HOM05D007038 ORTHO05D008893 1.2e-43 181.4 137 64.2
Potri.006G182201 Populus trichocarpa HOM05D007038 ORTHO05D008893 8.1e-35 152.1 127 64.6
CDE02G0638 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 2.2e-24 117.5 160 45.6
Hma1.2p1_0222F.1_g093710 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 3.8e-24 116.7 83 67.5
Hma1.2p1_0222F.1_g093742 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 3.8e-24 116.7 83 67.5
CDE05G1617 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 8.4e-24 115.5 151 46.4
PSO782G2459 Papaver somniferum HOM05D007038 ORTHO05D008893 2.7e-22 110.5 114 55.3
Pp3c7_6690 Physcomitrium patens HOM05D007038 ORTHO05D008893 5.6e-20 102.8 367 26.2
SHI02845 Sapria himalayana HOM05D007038 ORTHO05D008893 1.3e-19 101.7 152 45.4
HPP92_020432 Vanilla planifolia HOM05D000367 ORTHO05D008893 8.2e-11 72.4 90 48.9
Mapoly0056s0109 Marchantia polymorpha HOM05D007038 ORTHO05D008893 4.5e-09 66.6 202 22.8
Ah.14g084570 Amaranthus hybridus HOM05D007038 ORTHO05D008893 2.9e-08 63.9 61 55.7


User provided reference genes

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