Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A711T48 Lonicera japonica HOM05D007151 ORTHO05D009056 4.6e-277 957.2 464 100.0
Actinidia04269 Actinidia chinensis HOM05D007151 ORTHO05D009056 1.3e-178 630.2 474 65.6
Actinidia04263 Actinidia chinensis HOM05D007151 ORTHO05D009056 6.4e-178 627.9 475 65.7
CSS0031191 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 6.0e-168 594.7 407 70.5
GSVIVG01001047001 Vitis vinifera HOM05D007151 ORTHO05D009056 1.7e-167 593.2 450 66.0
vmacro21874 Vaccinium macrocarpon HOM05D007151 ORTHO05D009056 4.3e-166 588.6 464 63.1
Cfa020867 Carpinus fangiana HOM05D007151 ORTHO05D009056 1.2e-165 587.0 441 65.5
DCAR_019364 Daucus carota HOM05D007151 ORTHO05D009056 4.7e-165 585.1 440 65.5
Peaxi162Scf00347g00330 Petunia axillaris HOM05D007151 ORTHO05D009056 2.6e-163 579.3 416 67.1
TAR626G0740 Trochodendron aralioides HOM05D007151 ORTHO05D009056 2.6e-163 579.3 409 68.2
Nitab4.5_0000416g0100 Nicotiana tabacum HOM05D007151 ORTHO05D009056 4.4e-163 578.6 417 68.1
Nitab4.5_0010178g0030 Nicotiana tabacum HOM05D007151 ORTHO05D009056 8.3e-162 574.3 415 67.5
QL02p091761 Quercus lobata HOM05D007151 ORTHO05D009056 1.4e-161 573.5 445 64.3
CAN.G520.35 Capsicum annuum HOM05D007151 ORTHO05D009056 1.2e-160 570.5 414 67.1
Dinv41414 Davidia involucrata HOM05D007151 ORTHO05D009056 1.6e-160 570.1 376 73.9
Atru.chr7.189 Acer truncatum HOM05D007151 ORTHO05D009056 2.1e-160 569.7 424 64.2
TWI34G1895 Tripterygium wilfordii HOM05D007151 ORTHO05D009056 1.0e-159 567.4 414 66.9
Manes.06G039800 Manihot esculenta HOM05D007151 ORTHO05D009056 5.1e-159 565.1 448 63.6
PGSC0003DMG400011834 Solanum tuberosum HOM05D007151 ORTHO05D009056 6.6e-159 564.7 415 66.0
Lsat_1_v5_gn_0_44621 Lactuca sativa HOM05D007151 ORTHO05D009056 4.3e-158 562.0 432 63.2
Lsat_1_v5_gn_5_90740 Lactuca sativa HOM05D007151 ORTHO05D009056 4.3e-158 562.0 432 63.2
Haze_19293 Corylus avellana HOM05D007151 ORTHO05D009056 9.5e-158 560.8 449 63.0
Solyc07g005240.4 Solanum lycopersicum HOM05D007151 ORTHO05D009056 1.2e-157 560.5 466 60.5
HanXRQChr10g0314511 Helianthus annuus HOM05D007151 ORTHO05D009056 2.3e-156 556.2 451 60.5
Duzib168G1221 Durio zibethinus HOM05D007151 ORTHO05D009056 4.0e-156 555.4 427 64.9
Sabra18G0095800 Salix brachista HOM05D007151 ORTHO05D009056 4.0e-156 555.4 425 63.5
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 1.2e-155 553.9 410 64.6
Aqoxy7G03505 Aquilegia oxysepala HOM05D007151 ORTHO05D009056 2.0e-155 553.1 454 59.0
CiPaw.15G171100 Carya illinoinensis HOM05D007151 ORTHO05D009056 1.3e-154 550.4 438 62.1
Oeu052172.1 Olea europaea HOM05D007151 ORTHO05D009056 6.4e-154 548.1 432 61.3
Nn8g39757 Nelumbo nucifera HOM05D007151 ORTHO05D009056 8.4e-154 547.7 457 61.1
Thecc.09G036700 Theobroma cacao HOM05D007151 ORTHO05D009056 1.1e-153 547.4 427 63.0
COL.COLO4_18747 Corchorus olitorius HOM05D007151 ORTHO05D009056 1.9e-153 546.6 435 61.8
Cpa.g.sc46.106 Carica papaya HOM05D007151 ORTHO05D009056 3.2e-153 545.8 408 64.5
MD02G1011800 Malus domestica HOM05D007151 ORTHO05D009056 1.6e-152 543.5 433 63.0
CANSAT11G1483 Cannabis sativa HOM05D007151 ORTHO05D009056 2.7e-152 542.7 428 60.7
Ciclev10008285m.g Citrus clementina HOM05D007151 ORTHO05D009056 2.7e-152 542.7 424 63.4
Prupe.7G252600 Prunus persica HOM05D007151 ORTHO05D009056 6.0e-152 541.6 436 60.6
Potri.018G112600 Populus trichocarpa HOM05D007151 ORTHO05D009056 1.0e-151 540.8 427 63.5
FvH4_1g01491 Fragaria vesca HOM05D007151 ORTHO05D009056 2.3e-151 539.7 433 61.7
RcHm_v2.0_Chr2g0086401 Rosa chinensis HOM05D007151 ORTHO05D009056 2.3e-151 539.7 419 63.0
Gohir.D13G192100 Gossypium hirsutum HOM05D007151 ORTHO05D009056 1.1e-150 537.3 431 61.7
FAN26G2518 Fragaria x ananassa HOM05D007151 ORTHO05D009056 2.5e-150 536.2 406 64.5
Gohir.A13G185600 Gossypium hirsutum HOM05D007151 ORTHO05D009056 2.5e-150 536.2 431 61.3
Migut.K00359 Erythranthe guttata HOM05D007151 ORTHO05D009056 9.6e-150 534.3 437 58.8
Gorai.013G218000 Gossypium raimondii HOM05D007151 ORTHO05D009056 1.6e-149 533.5 431 61.5
Eucgr.C00404 Eucalyptus grandis HOM05D007151 ORTHO05D009056 4.7e-149 531.9 409 61.1
Cc06_g23440 Coffea canephora HOM05D007151 ORTHO05D009056 3.1e-148 529.3 444 59.2
PGR142G3459 Punica granatum HOM05D007151 ORTHO05D009056 8.9e-148 527.7 413 61.0
Sed0008117 Sechium edule HOM05D007151 ORTHO05D009056 8.9e-148 527.7 425 60.0
BraA03t14189Z Brassica rapa HOM05D007151 ORTHO05D009056 5.8e-147 525.0 429 59.7
A03p51030 Brassica napus HOM05D007151 ORTHO05D009056 9.9e-147 524.2 406 61.8
C07p49460 Brassica napus HOM05D007151 ORTHO05D009056 9.9e-147 524.2 428 59.8
BolC7t45451H Brassica oleracea HOM05D007151 ORTHO05D009056 9.9e-147 524.2 428 59.8
THA.LOC104826576 Tarenaya hassleriana HOM05D007151 ORTHO05D009056 9.9e-147 524.2 419 60.9
Thhalv10025257m.g Eutrema salsugineum HOM05D007151 ORTHO05D009056 1.9e-145 520.0 413 60.3
Psat1g022920 Pisum sativum HOM05D007151 ORTHO05D009056 5.4e-145 518.5 457 56.2
SGA_v2.0_scaffold336G49159 Striga asiatica HOM05D007151 ORTHO05D009056 2.7e-144 516.2 412 59.2
ClCG06G012110 Citrullus lanatus HOM05D007151 ORTHO05D009056 6.0e-144 515.0 422 60.4
CsaV3_1G028600 Cucumis sativus L. HOM05D007151 ORTHO05D009056 6.0e-144 515.0 419 60.6
Hund21618 Selenicereus undatus HOM05D007151 ORTHO05D009056 1.3e-143 513.8 423 57.0
AT2G22650 Arabidopsis thaliana HOM05D007151 ORTHO05D009056 1.7e-143 513.5 426 57.3
Medtr2g449830 Medicago truncatula HOM05D007151 ORTHO05D009056 1.7e-143 513.5 427 57.6
Glyma.15G208200 Glycine max HOM05D007151 ORTHO05D009056 2.3e-143 513.1 452 56.6
CARHR104080 Cardamine hirsuta HOM05D007151 ORTHO05D009056 5.1e-143 511.9 414 58.7
AL3G44210 Arabidopsis lyrata HOM05D007151 ORTHO05D009056 1.9e-142 510.0 428 58.2
FAN23G0937 Fragaria x ananassa HOM05D007151 ORTHO05D009056 7.3e-142 508.1 447 58.4
Lj6g0019652 Lotus japonicus HOM05D007151 ORTHO05D009056 1.3e-141 507.3 433 57.3
TPR.G31930 Trifolium pratense HOM05D007151 ORTHO05D009056 2.8e-141 506.1 467 54.6
VMungo1309G1509 Vigna mungo HOM05D007151 ORTHO05D009056 2.8e-141 506.1 453 55.4
Aa31sc130G90 Aethionema arabicum HOM05D007151 ORTHO05D009056 3.1e-140 502.7 408 59.1
PSO063G2965 Papaver somniferum HOM05D007151 ORTHO05D009056 1.3e-138 497.3 425 56.2
arahy.Tifrunner.gnm1.ann1.BVF972 Arachis hypogaea HOM05D007151 ORTHO05D009056 2.2e-138 496.5 426 57.3
Sp7g16040 Schrenkiella parvula HOM05D007151 ORTHO05D009056 2.7e-136 489.6 424 56.8
EL10Ac8g18840 Beta vulgaris HOM05D007151 ORTHO05D009056 1.5e-134 483.8 437 55.1
Sc08g0005090 Simmondsia chinensis HOM05D007151 ORTHO05D009056 2.5e-134 483.0 432 57.2
MELO3C010253.2 Cucumis melo HOM05D007151 ORTHO05D009056 7.4e-134 481.5 419 58.0
SGA_v2.0_scaffold206G41840 Striga asiatica HOM05D007151 ORTHO05D009056 1.3e-133 480.7 409 57.0
Sopen07g001150 Solanum pennellii HOM05D007151 ORTHO05D009056 8.1e-133 478.0 367 63.5
arahy.Tifrunner.gnm1.ann1.36BD1U Arachis hypogaea HOM05D007151 ORTHO05D009056 3.1e-132 476.1 405 58.5
Phvul.009G208100 Phaseolus vulgaris HOM05D007151 ORTHO05D009056 7.6e-131 471.5 452 53.3
AUR62042027 Chenopodium quinoa HOM05D007151 ORTHO05D009056 2.2e-130 469.9 424 55.0
Ca_25731_v3 Cicer arietinum L. HOM05D007151 ORTHO05D009056 1.2e-128 464.2 361 61.2
Os06g0181400 Oryza sativa ssp. japonica HOM05D007151 ORTHO05D009056 2.8e-125 453.0 408 54.2
CSS0035136 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 1.1e-124 451.1 303 70.0
Rhsim01G0049000 Rhododendron simsii HOM05D007151 ORTHO05D008498 4.5e-123 445.7 358 62.8
Zm00001eb268060 Zea mays HOM05D007151 ORTHO05D009056 1.1e-121 441.0 433 51.3
Ah.14g078500 Amaranthus hybridus HOM05D007151 ORTHO05D009056 7.1e-121 438.3 406 54.9
SEGI_09059 Sequoiadendron giganteum HOM05D007151 ORTHO05D009056 2.7e-120 436.4 440 50.7
CDE05G1962 Ceratophyllum demersum HOM05D007151 ORTHO05D009056 3.7e-117 426.0 408 52.7
unitig_899.g15451 Utricularia gibba HOM05D007151 ORTHO05D009056 4.8e-117 425.6 388 54.1
ATR0629G078 Amborella trichopoda HOM05D007151 ORTHO05D009056 8.7e-111 404.8 372 52.4
Lalb_Chr08g0233881 Lupinus albus HOM05D007151 ORTHO05D009056 2.9e-106 389.8 302 61.3
FvH4_5g35120 Fragaria vesca HOM05D007151 ORTHO05D009056 4.6e-104 382.5 292 62.7
Carub.0013s0015 Capsella rubella HOM05D007151 ORTHO05D009056 1.1e-102 377.9 305 59.7
Mapoly0072s0110 Marchantia polymorpha HOM05D007151 ORTHO05D009056 1.1e-97 361.3 430 44.2
Pp3c21_4180 Physcomitrium patens HOM05D007151 ORTHO05D009056 1.0e-90 338.2 421 44.4
AagrBONN_evm.TU.Sc2ySwM_117.1501 Anthoceros agrestis HOM05D007151 ORTHO05D009056 1.9e-65 254.2 319 42.9
Cc06_g23410 Coffea canephora HOM05D007151 ORTHO05D009056 9.2e-60 235.3 290 47.9
PRCOL_00000450 Prasinoderma coloniale HOM05D007151 ORTHO05D009056 6.4e-53 212.6 408 35.8
Cre02.g109800 Chlamydomonas reinhardtii HOM05D007151 ORTHO05D009056 3.6e-48 196.8 539 29.5
CANSAT11G0850 Cannabis sativa HOM05D007151 ORTHO05D009056 3.9e-42 176.8 127 64.6
SMO364G0487 Selaginella moellendorffii HOM05D007151 ORTHO05D009056 1.2e-40 171.8 201 43.8
Lalb_Chr08g0233871 Lupinus albus HOM05D007151 ORTHO05D009056 6.6e-34 149.4 124 60.5
MCO12G285 Micromonas commoda HOM05D007151 ORTHO05D009056 1.1e-31 142.1 554 26.4
CBR_g19142 Chara braunii HOM05D007151 ORTHO05D009056 1.3e-24 118.6 265 29.4
HPP92_018514 Vanilla planifolia HOM05D007151 ORTHO05D009056 4.3e-17 93.6 86 53.5
TPR.G31928 Trifolium pratense HOM05D007151 ORTHO05D009056 3.6e-16 90.5 99 49.5
FAN11G2323 Fragaria x ananassa HOM05D007151 ORTHO05D009056 6.2e-16 89.7 60 66.7
Hma1.2p1_0182F.1_g080700 Hydrangea macrophylla HOM05D007151 ORTHO05D009056 3.0e-10 70.9 44 68.2
FAN07G0026 Fragaria x ananassa HOM05D000007 ORTHO05D005026 5.3e-07 60.1 45 55.6


User provided reference genes

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