Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A703T45 Lonicera japonica HOM05D008165 ORTHO05D007516 1.0e-37 160.6 83 100.0
Rhsim03G0252900 Rhododendron simsii HOM05D008165 ORTHO05D007516 6.0e-17 91.7 76 60.5
PGSC0003DMG400007836 Solanum tuberosum HOM05D008165 ORTHO05D007516 3.9e-16 89.0 73 61.6
Solyc12g009860.3 Solanum lycopersicum HOM05D008165 ORTHO05D007516 3.3e-15 85.9 73 60.3
Sopen12g004750 Solanum pennellii HOM05D008165 ORTHO05D007516 3.3e-15 85.9 73 60.3
Hma1.2p1_0343F.1_g130780 Hydrangea macrophylla HOM05D008165 ORTHO05D007516 2.3e-13 79.7 73 57.5
vmacro23527 Vaccinium macrocarpon HOM05D008165 ORTHO05D007516 3.1e-13 79.3 77 57.1
Manes.14G119100 Manihot esculenta HOM05D008165 ORTHO05D007516 4.4e-12 75.5 76 51.3
Oeu058579.1 Olea europaea HOM05D008165 ORTHO05D007516 4.4e-12 75.5 74 56.8
QL02p090702 Quercus lobata HOM05D008165 ORTHO05D007516 7.5e-12 74.7 74 51.4
CAN.G467.3 Capsicum annuum HOM05D013625 ORTHO05D007516 1.7e-11 73.6 93 48.4
Nitab4.5_0008536g0060 Nicotiana tabacum HOM05D008165 ORTHO05D007516 1.7e-11 73.6 69 55.1
Thecc.09G137200 Theobroma cacao HOM05D008165 ORTHO05D007516 2.2e-11 73.2 75 49.3
Duzib168G0348 Durio zibethinus HOM05D008165 ORTHO05D007516 4.9e-11 72.0 75 48.0
TAR673G0004 Trochodendron aralioides HOM05D008165 ORTHO05D007516 6.4e-11 71.6 76 53.9
Ah.14g079050 Amaranthus hybridus HOM05D008165 ORTHO05D007516 8.3e-11 71.2 81 45.7
Gohir.D05G014200 Gossypium hirsutum HOM05D008165 ORTHO05D007516 8.3e-11 71.2 74 47.3
Manes.06G044400 Manihot esculenta HOM05D008165 ORTHO05D007516 8.3e-11 71.2 75 52.0
HanXRQChr06g0180411 Helianthus annuus HOM05D021640 ORTHO05D007516 1.1e-10 70.9 68 58.8
Gohir.A05G013100 Gossypium hirsutum HOM05D008165 ORTHO05D007516 1.4e-10 70.5 72 47.2
Duzib150G0960 Durio zibethinus HOM05D008165 ORTHO05D007516 2.4e-10 69.7 80 43.8
Duzib187G0069 Durio zibethinus HOM05D008165 ORTHO05D007516 3.2e-10 69.3 81 44.4
Gorai.009G014200 Gossypium raimondii HOM05D008165 ORTHO05D007516 4.1e-10 68.9 73 46.6
Aqoxy7G03599 Aquilegia oxysepala HOM05D008165 ORTHO05D007516 5.4e-10 68.6 72 45.8
TAR383G0642 Trochodendron aralioides HOM05D008165 ORTHO05D007516 5.4e-10 68.6 74 52.7
Oeu055936.1 Olea europaea HOM05D008165 ORTHO05D007516 7.1e-10 68.2 79 48.1
Migut.J01244 Erythranthe guttata HOM05D008165 ORTHO05D007516 1.2e-09 67.4 77 46.8
Manes.04G109000 Manihot esculenta HOM05D008165 ORTHO05D007516 1.2e-09 67.4 71 47.9
RcHm_v2.0_Chr2g0087101 Rosa chinensis HOM05D008165 ORTHO05D007516 1.2e-09 67.4 83 45.8
GSVIVG01012854001 Vitis vinifera HOM05D008165 ORTHO05D007516 1.2e-09 67.4 75 45.3
TAR626G1841 Trochodendron aralioides HOM05D008165 ORTHO05D007516 1.6e-09 67.0 77 48.1
MELO3C004479.2 Cucumis melo HOM05D008165 ORTHO05D007516 3.5e-09 65.9 82 45.1
Cfa002265 Carpinus fangiana HOM05D008165 ORTHO05D007516 4.6e-09 65.5 73 52.1
FAN23G0205 Fragaria x ananassa HOM05D008165 ORTHO05D007516 4.6e-09 65.5 70 48.6
Prupe.7G252200 Prunus persica HOM05D008165 ORTHO05D007516 6.0e-09 65.1 81 43.2
TWI63G1030 Tripterygium wilfordii HOM05D008165 ORTHO05D007516 6.0e-09 65.1 81 45.7
TWI63G1311 Tripterygium wilfordii HOM05D008165 ORTHO05D007516 6.0e-09 65.1 81 45.7
Atru.chr7.2009 Acer truncatum HOM05D008165 ORTHO05D007516 7.8e-09 64.7 76 40.8
CsaV3_2G003340 Cucumis sativus L. HOM05D008165 ORTHO05D007516 7.8e-09 64.7 81 44.4
FAN26G1249 Fragaria x ananassa HOM05D008165 ORTHO05D007516 7.8e-09 64.7 70 50.0
Hund09307 Selenicereus undatus HOM05D008165 ORTHO05D007516 7.8e-09 64.7 82 45.1
Nn8g39643 Nelumbo nucifera HOM05D008165 ORTHO05D007516 1.0e-08 64.3 75 46.7
Hund21593 Selenicereus undatus HOM05D008165 ORTHO05D007516 5.1e-08 62.0 81 40.7
MD02G1018600 Malus domestica HOM05D008165 ORTHO05D007516 6.6e-08 61.6 70 47.1
GSVIVG01017457001 Vitis vinifera HOM05D009923 ORTHO05D007516 8.6e-08 61.2 65 49.2
ClCG11G003470 Citrullus lanatus HOM05D008165 ORTHO05D007516 1.1e-07 60.8 82 40.2
MD15G1162600 Malus domestica HOM05D008165 ORTHO05D007516 1.5e-07 60.5 76 46.1
Nitab4.5_0007621g0020 Nicotiana tabacum HOM05D013625 ORTHO05D007516 1.5e-07 60.5 82 46.3
FvH4_1g02080 Fragaria vesca HOM05D008165 ORTHO05D007516 1.9e-07 60.1 67 47.8
FAN19G0448 Fragaria x ananassa HOM05D008165 ORTHO05D007516 1.9e-07 60.1 67 47.8
Peaxi162Scf00088g00076 Petunia axillaris HOM05D013625 ORTHO05D007516 1.9e-07 60.1 75 46.7
ClCG11G003490 Citrullus lanatus HOM05D008165 ORTHO05D007516 2.5e-07 59.7 79 41.8
TAR625G0094 Trochodendron aralioides HOM05D008165 ORTHO05D007516 4.3e-07 58.9 68 48.5
Dinv38142 Davidia involucrata HOM05D008165 ORTHO05D007516 5.6e-07 58.5 76 39.5
Dinv15868 Davidia involucrata HOM05D009923 ORTHO05D007516 7.3e-07 58.2 68 47.1
Sabra06G0201600 Salix brachista HOM05D009923 ORTHO05D007516 7.3e-07 58.2 70 44.3
THA.LOC104808953 Tarenaya hassleriana HOM05D010884 ORTHO05D012938 7.3e-07 58.2 67 49.3
ECA234G1017 Erigeron canadensis HOM05D021640 ORTHO05D007516 1.2e-06 57.4 63 49.2
CiPaw.07G225700 Carya illinoinensis HOM05D009923 ORTHO05D007516 1.6e-06 57.0 69 44.9
Cc06_g07690 Coffea canephora HOM05D008165 ORTHO05D007516 1.6e-06 57.0 71 46.5
Glyma.17G107800 Glycine max HOM05D013093 ORTHO05D007516 1.6e-06 57.0 69 46.4
THA.LOC104826562 Tarenaya hassleriana HOM05D010884 ORTHO05D012938 2.1e-06 56.6 74 45.9
Sed0004036 Sechium edule HOM05D008165 ORTHO05D007516 2.8e-06 56.2 84 38.1
HanXRQChr10g0314161 Helianthus annuus HOM05D021640 ORTHO05D007516 3.6e-06 55.8 58 53.4
Solyc07g007500.3 Solanum lycopersicum HOM05D013625 ORTHO05D007516 6.2e-06 55.1 91 39.6
Sopen07g003520 Solanum pennellii HOM05D013625 ORTHO05D007516 6.2e-06 55.1 91 39.6
CSS0041528 Camellia sinensis var. sinensis HOM05D008165 ORTHO05D007516 8.1e-06 54.7 43 62.8
MELO3C004482.2 Cucumis melo HOM05D008165 ORTHO05D007516 8.1e-06 54.7 79 39.2
TWI34G2014 Tripterygium wilfordii HOM05D008165 ORTHO05D007516 8.1e-06 54.7 77 41.6


User provided reference genes

Program Settings