Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A703T41 Lonicera japonica HOM05D000018 ORTHO05D001040 3.4e-74 281.6 140 100.0
Thecc.09G136300 Theobroma cacao HOM05D000018 ORTHO05D001040 1.5e-13 80.1 50 72.0
COL.COLO4_33379 Corchorus olitorius HOM05D000018 ORTHO05D001040 2.5e-13 79.3 50 70.0
Duzib168G1972 Durio zibethinus HOM05D000018 ORTHO05D001040 2.1e-12 76.3 50 64.0
Gorai.004G108800 Gossypium raimondii HOM05D000018 ORTHO05D001040 2.8e-12 75.9 50 64.0
vmacro07743 Vaccinium macrocarpon HOM05D000018 ORTHO05D001040 1.4e-11 73.6 50 68.0
Rhsim01G0055600 Rhododendron simsii HOM05D000018 ORTHO05D001040 1.8e-11 73.2 50 68.0
Cpa.g.sc277.8 Carica papaya HOM05D000018 ORTHO05D001040 5.3e-11 71.6 50 64.0
CSS0000712 Camellia sinensis var. sinensis HOM05D000018 ORTHO05D001040 6.9e-11 71.2 50 64.0
RcHm_v2.0_Chr2g0087231 Rosa chinensis HOM05D000018 ORTHO05D001040 6.9e-11 71.2 50 64.0
MD02G1020000 Malus domestica HOM05D000018 ORTHO05D001040 1.2e-10 70.5 50 62.0
Sabra18G0102200 Salix brachista HOM05D000018 ORTHO05D001040 1.2e-10 70.5 61 55.7
CSS0028792 Camellia sinensis var. sinensis HOM05D000018 ORTHO05D001040 1.5e-10 70.1 50 64.0
FvH4_1g02121 Fragaria vesca HOM05D000018 ORTHO05D001040 1.5e-10 70.1 50 62.0
FAN19G0251 Fragaria x ananassa HOM05D000018 ORTHO05D001040 1.5e-10 70.1 50 62.0
FAN28G1873 Fragaria x ananassa HOM05D000018 ORTHO05D001040 1.5e-10 70.1 50 62.0
Manes.06G045000 Manihot esculenta HOM05D000018 ORTHO05D001040 1.5e-10 70.1 50 62.0
GSVIVG01012842001 Vitis vinifera HOM05D000018 ORTHO05D001040 2.0e-10 69.7 45 66.7
A10p19580 Brassica napus HOM05D000018 ORTHO05D001040 2.6e-10 69.3 50 64.0
BraA10t44033Z Brassica rapa HOM05D000018 ORTHO05D001040 2.6e-10 69.3 50 64.0
FAN28G2805 Fragaria x ananassa HOM05D000018 ORTHO05D001040 2.6e-10 69.3 78 46.2
Oeu052738.1 Olea europaea HOM05D000018 ORTHO05D001040 2.6e-10 69.3 50 60.0
C01p39470 Brassica napus HOM05D003124 ORTHO05D041156 3.4e-10 68.9 50 64.0
Potri.018G121700 Populus trichocarpa HOM05D000018 ORTHO05D001040 4.5e-10 68.6 50 58.0
BcaB08g36499 Brassica carinata HOM05D000018 ORTHO05D001040 5.9e-10 68.2 50 62.0
BcaC04g19429 Brassica carinata HOM05D000018 ORTHO05D001040 7.6e-10 67.8 50 60.0
C09p55780 Brassica napus HOM05D000018 ORTHO05D001040 7.6e-10 67.8 50 62.0
BolC9t58447H Brassica oleracea HOM05D000018 ORTHO05D001040 7.6e-10 67.8 50 60.0
FvH4_1g02150 Fragaria vesca HOM05D000018 ORTHO05D001040 7.6e-10 67.8 50 60.0
Nitab4.5_0000704g0090 Nicotiana tabacum HOM05D000018 ORTHO05D001040 1.0e-09 67.4 47 59.6
Psat5g004320 Pisum sativum HOM05D000018 ORTHO05D001040 1.0e-09 67.4 46 65.2
Rhsim01G0056200 Rhododendron simsii HOM05D000018 ORTHO05D001040 1.0e-09 67.4 49 63.3
RcHm_v2.0_Chr2g0087211 Rosa chinensis HOM05D000018 ORTHO05D001040 1.0e-09 67.4 50 58.0
Sp4g12070 Schrenkiella parvula HOM05D000018 ORTHO05D001040 1.0e-09 67.4 49 55.1
THA.LOC104811013 Tarenaya hassleriana HOM05D000018 ORTHO05D001040 1.0e-09 67.4 49 61.2
AL6G31960 Arabidopsis lyrata HOM05D000018 ORTHO05D001040 1.3e-09 67.0 50 58.0
BolC1t03897H Brassica oleracea HOM05D003124 ORTHO05D041156 1.3e-09 67.0 47 66.0
Lj1g0001008 Lotus japonicus HOM05D000018 ORTHO05D001040 1.3e-09 67.0 46 63.0
Potri.006G062500 Populus trichocarpa HOM05D000018 ORTHO05D001040 1.3e-09 67.0 50 58.0
Prupe.4G248400 Prunus persica HOM05D000018 ORTHO05D001040 1.3e-09 67.0 50 60.0
Prupe.4G248600 Prunus persica HOM05D000018 ORTHO05D001040 1.3e-09 67.0 50 60.0
Sabra06G0045000 Salix brachista HOM05D000018 ORTHO05D001040 1.3e-09 67.0 50 58.0
AT5G20400 Arabidopsis thaliana HOM05D000018 ORTHO05D001040 2.2e-09 66.2 50 58.0
Carub.0006s1878 Capsella rubella HOM05D000018 ORTHO05D001040 2.2e-09 66.2 49 59.2
Prupe.4G248200 Prunus persica HOM05D000018 ORTHO05D001040 2.2e-09 66.2 46 65.2
Rhsim01G0056800 Rhododendron simsii HOM05D000018 ORTHO05D001040 2.2e-09 66.2 49 61.2
Sp6g24020 Schrenkiella parvula HOM05D000018 ORTHO05D001040 2.2e-09 66.2 49 61.2
CARHR192440 Cardamine hirsuta HOM05D000018 ORTHO05D001040 2.9e-09 65.9 50 60.0
Nitab4.5_0003587g0030 Nicotiana tabacum HOM05D000018 ORTHO05D001040 2.9e-09 65.9 49 61.2
QL02p090453 Quercus lobata HOM05D000018 ORTHO05D001040 2.9e-09 65.9 46 63.0
Aa31LG1G14320 Aethionema arabicum HOM05D000018 ORTHO05D001040 3.8e-09 65.5 50 62.0
CARHR192400 Cardamine hirsuta HOM05D000018 ORTHO05D001040 3.8e-09 65.5 50 58.0
Ciclev10005267m.g Citrus clementina HOM05D000018 ORTHO05D001040 3.8e-09 65.5 50 58.0
MELO3C027120.2 Cucumis melo HOM05D000018 ORTHO05D001040 3.8e-09 65.5 50 56.0
SalBow1G8497 Salvia bowleyana HOM05D000018 ORTHO05D001040 3.8e-09 65.5 49 55.1
MD02G1019700 Malus domestica HOM05D000018 ORTHO05D001040 5.0e-09 65.1 50 62.0
A03p10080 Brassica napus HOM05D000018 ORTHO05D001040 8.5e-09 64.3 50 58.0
BolC3t13632H Brassica oleracea HOM05D000018 ORTHO05D001040 8.5e-09 64.3 50 58.0
BraA03t10319Z Brassica rapa HOM05D000018 ORTHO05D001040 8.5e-09 64.3 50 58.0
CiPaw.03G251200 Carya illinoinensis HOM05D000018 ORTHO05D001040 8.5e-09 64.3 50 56.0
Ciclev10026001m.g Citrus clementina HOM05D000018 ORTHO05D001040 8.5e-09 64.3 49 61.2
Thhalv10013988m.g Eutrema salsugineum HOM05D000018 ORTHO05D001040 8.5e-09 64.3 49 57.1
Lj1g0003108 Lotus japonicus HOM05D000018 ORTHO05D001040 8.5e-09 64.3 46 63.0
Nitab4.5_0002091g0030 Nicotiana tabacum HOM05D000018 ORTHO05D001040 8.5e-09 64.3 50 48.0
C03p11610 Brassica napus HOM05D000018 ORTHO05D001040 1.1e-08 63.9 50 56.0
Ca_15337_v3 Cicer arietinum L. HOM05D000018 ORTHO05D001040 1.1e-08 63.9 46 60.9
ClCG06G011810 Citrullus lanatus HOM05D000018 ORTHO05D001040 1.1e-08 63.9 46 56.5
Glyma.04G008633 Glycine max HOM05D000018 ORTHO05D001040 1.1e-08 63.9 46 60.9
QL02p090427 Quercus lobata HOM05D000018 ORTHO05D001040 1.1e-08 63.9 47 59.6
QL02p090497 Quercus lobata HOM05D000018 ORTHO05D001040 1.1e-08 63.9 46 60.9
Rhsim01G0058400 Rhododendron simsii HOM05D000018 ORTHO05D001040 1.1e-08 63.9 49 61.2
TPR.G32197 Trifolium pratense HOM05D000018 ORTHO05D001040 1.4e-08 63.5 46 60.9
Ciclev10027018m.g Citrus clementina HOM05D000018 ORTHO05D001040 1.9e-08 63.2 49 61.2
CsaV3_1G028310 Cucumis sativus L. HOM05D000018 ORTHO05D001040 1.9e-08 63.2 53 47.2
Thhalv10013989m.g Eutrema salsugineum HOM05D000018 ORTHO05D001040 1.9e-08 63.2 50 54.0
RcHm_v2.0_Chr2g0087201 Rosa chinensis HOM05D000018 ORTHO05D001040 1.9e-08 63.2 50 54.0
TAR626G0401 Trochodendron aralioides HOM05D000018 ORTHO05D001040 1.9e-08 63.2 50 56.0
DCAR_014914 Daucus carota HOM05D000018 ORTHO05D001040 2.5e-08 62.8 49 59.2
FvH4_1g02151 Fragaria vesca HOM05D000018 ORTHO05D001040 2.5e-08 62.8 50 54.0
FAN28G2339 Fragaria x ananassa HOM05D000018 ORTHO05D001040 2.5e-08 62.8 50 54.0
Phvul.009G003400 Phaseolus vulgaris HOM05D000018 ORTHO05D001040 2.5e-08 62.8 46 58.7
RcHm_v2.0_Chr2g0087261 Rosa chinensis HOM05D000018 ORTHO05D001040 2.5e-08 62.8 49 57.1
THA.LOC104811012 Tarenaya hassleriana HOM05D000018 ORTHO05D001040 2.5e-08 62.8 48 54.2
THA.LOC104811014 Tarenaya hassleriana HOM05D000018 ORTHO05D001040 2.5e-08 62.8 50 56.0
BcaB01g04788 Brassica carinata HOM05D001941 ORTHO05D091868 3.2e-08 62.4 50 56.0
Nitab4.5_0002759g0050 Nicotiana tabacum HOM05D000018 ORTHO05D001040 3.2e-08 62.4 50 48.0
QL02p090461 Quercus lobata HOM05D000018 ORTHO05D001040 3.2e-08 62.4 47 59.6
SalBow1G2828 Salvia bowleyana HOM05D000018 ORTHO05D001040 3.2e-08 62.4 49 55.1
Sed0009332 Sechium edule HOM05D000018 ORTHO05D001040 3.2e-08 62.4 50 52.0
vmacro07744 Vaccinium macrocarpon HOM05D000018 ORTHO05D001040 3.2e-08 62.4 47 63.8
Actinidia07340 Actinidia chinensis HOM05D000018 ORTHO05D001040 4.2e-08 62.0 50 54.0
Ah.07g198730 Amaranthus hybridus HOM05D000018 ORTHO05D001040 4.2e-08 62.0 45 55.6
EL10Ac8g18765 Beta vulgaris HOM05D000018 ORTHO05D001040 4.2e-08 62.0 46 54.3
Medtr3g117420 Medicago truncatula HOM05D000018 ORTHO05D001040 4.2e-08 62.0 46 58.7
Potri.018G121800 Populus trichocarpa HOM05D000018 ORTHO05D001040 4.2e-08 62.0 49 57.1
Glyma.04G008567 Glycine max HOM05D000018 ORTHO05D001040 5.5e-08 61.6 46 60.9
CARHR267180 Cardamine hirsuta HOM05D000018 ORTHO05D001040 7.2e-08 61.2 47 57.4
Cc06_g07740 Coffea canephora HOM05D000018 ORTHO05D001040 7.2e-08 61.2 48 58.3
Haze_25457 Corylus avellana HOM05D000018 ORTHO05D001040 7.2e-08 61.2 50 54.0
CsaV3_1G028300 Cucumis sativus L. HOM05D000018 ORTHO05D001040 7.2e-08 61.2 50 52.0
FAN26G3202 Fragaria x ananassa HOM05D000018 ORTHO05D001040 7.2e-08 61.2 49 55.1
A02p10600 Brassica napus HOM05D000018 ORTHO05D001040 9.3e-08 60.8 49 49.0
BraA02t06125Z Brassica rapa HOM05D000018 ORTHO05D001040 9.3e-08 60.8 49 49.0
CARHR267200 Cardamine hirsuta HOM05D000018 ORTHO05D001040 9.3e-08 60.8 48 56.2
FvH4_1g02160 Fragaria vesca HOM05D000018 ORTHO05D001040 9.3e-08 60.8 49 55.1
FAN19G3133 Fragaria x ananassa HOM05D000018 ORTHO05D001040 9.3e-08 60.8 49 55.1
FAN23G0676 Fragaria x ananassa HOM05D000018 ORTHO05D001040 9.3e-08 60.8 49 55.1
FAN28G1708 Fragaria x ananassa HOM05D000018 ORTHO05D001040 9.3e-08 60.8 49 55.1
CANSAT11G2477 Cannabis sativa HOM05D000018 ORTHO05D001040 1.2e-07 60.5 46 56.5
Ciclev10008809m.g Citrus clementina HOM05D000018 ORTHO05D001040 1.6e-07 60.1 49 55.1
Prupe.4G248300 Prunus persica HOM05D000018 ORTHO05D001040 1.6e-07 60.1 51 54.9
AUR62013265 Chenopodium quinoa HOM05D000018 ORTHO05D001040 2.1e-07 59.7 46 54.3
CsaV3_1G028060 Cucumis sativus L. HOM05D000018 ORTHO05D001040 2.1e-07 59.7 53 47.2
Medtr8g074050 Medicago truncatula HOM05D000018 ORTHO05D001040 2.1e-07 59.7 45 55.6
Peaxi162Scf00088g00818 Petunia axillaris HOM05D000018 ORTHO05D001040 2.1e-07 59.7 48 58.3
PGR142G1094 Punica granatum HOM05D000018 ORTHO05D001040 2.1e-07 59.7 49 57.1
Sabra18G0102300 Salix brachista HOM05D000018 ORTHO05D001040 2.1e-07 59.7 49 53.1
SHI28905 Sapria himalayana HOM05D000018 ORTHO05D001040 2.1e-07 59.7 45 57.8
Actinidia21929 Actinidia chinensis HOM05D000018 ORTHO05D001040 2.7e-07 59.3 46 56.5
Ah.14g079110 Amaranthus hybridus HOM05D000018 ORTHO05D001040 2.7e-07 59.3 49 51.0
FvH4_1g02152 Fragaria vesca HOM05D000018 ORTHO05D001040 2.7e-07 59.3 49 53.1
CAN.G351.5 Capsicum annuum HOM05D000018 ORTHO05D001040 3.6e-07 58.9 50 44.0
ClCG06G011790 Citrullus lanatus HOM05D000018 ORTHO05D001040 3.6e-07 58.9 50 44.0
Sed0015551 Sechium edule HOM05D000018 ORTHO05D001040 4.6e-07 58.5 50 50.0
CARHR267190 Cardamine hirsuta HOM05D000018 ORTHO05D001040 6.1e-07 58.2 46 58.7
Lalb_Chr11g0072301 Lupinus albus HOM05D000018 ORTHO05D001040 6.1e-07 58.2 46 52.2
DCAR_003585 Daucus carota HOM05D000018 ORTHO05D001040 7.9e-07 57.8 49 53.1
Prupe.4G248100 Prunus persica HOM05D000018 ORTHO05D001040 7.9e-07 57.8 46 54.3
CARHR192410 Cardamine hirsuta HOM05D000018 ORTHO05D001040 1.0e-06 57.4 53 50.9
CARHR267170 Cardamine hirsuta HOM05D000018 ORTHO05D001040 1.0e-06 57.4 47 51.1
Rhsim03G0252500 Rhododendron simsii HOM05D000018 ORTHO05D001040 1.3e-06 57.0 46 52.2
Ah.11g043610 Amaranthus hybridus HOM05D000018 ORTHO05D001040 1.8e-06 56.6 46 45.7
DCAR_014913 Daucus carota HOM05D000018 ORTHO05D001040 1.8e-06 56.6 44 54.5
HanXRQChr05g0143701 Helianthus annuus HOM05D000018 ORTHO05D001040 1.8e-06 56.6 46 52.2
Medtr8g074070 Medicago truncatula HOM05D000018 ORTHO05D001040 1.8e-06 56.6 49 53.1
QL02p090439 Quercus lobata HOM05D000018 ORTHO05D001040 1.8e-06 56.6 46 56.5
EL10Ac8g18771 Beta vulgaris HOM05D000018 ORTHO05D001040 2.3e-06 56.2 47 44.7
Cfa002277 Carpinus fangiana HOM05D000018 ORTHO05D001040 2.3e-06 56.2 50 50.0
DCAR_014916 Daucus carota HOM05D000954 ORTHO05D000822 2.3e-06 56.2 49 51.0
Sed0010443 Sechium edule HOM05D000018 ORTHO05D001040 2.3e-06 56.2 53 41.5
Hund21590 Selenicereus undatus HOM05D000018 ORTHO05D001040 2.3e-06 56.2 53 54.7
SGA_v2.0_scaffold183G39899 Striga asiatica HOM05D000018 ORTHO05D001040 2.3e-06 56.2 49 49.0
AL6G32080 Arabidopsis lyrata HOM05D000018 ORTHO05D001040 3.0e-06 55.8 66 42.4
CAN.G351.3 Capsicum annuum HOM05D000018 ORTHO05D001040 3.0e-06 55.8 47 44.7
CARHR267160 Cardamine hirsuta HOM05D000018 ORTHO05D001040 3.0e-06 55.8 46 52.2
Medtr3g117430 Medicago truncatula HOM05D000018 ORTHO05D001040 3.0e-06 55.8 42 54.8
Rhsim03G0252400 Rhododendron simsii HOM05D000018 ORTHO05D001040 3.0e-06 55.8 49 51.0
Sc08g0006080 Simmondsia chinensis HOM05D000018 ORTHO05D001040 3.0e-06 55.8 49 51.0
VMungo1309G0843 Vigna mungo HOM05D000018 ORTHO05D001040 3.9e-06 55.5 45 53.3
EL10Ac7g16867 Beta vulgaris HOM05D000018 ORTHO05D001040 5.1e-06 55.1 47 48.9
Peaxi162Scf00079g02322 Petunia axillaris HOM05D000018 ORTHO05D001040 5.1e-06 55.1 46 43.5
Sc14g0000120 Simmondsia chinensis HOM05D000018 ORTHO05D001040 5.1e-06 55.1 78 34.6
PGSC0003DMG402019187 Solanum tuberosum HOM05D000018 ORTHO05D001040 5.1e-06 55.1 50 42.0
MELO3C027119.2 Cucumis melo HOM05D000018 ORTHO05D001040 6.7e-06 54.7 49 44.9
Oeu000530.2 Olea europaea HOM05D000018 ORTHO05D001040 6.7e-06 54.7 49 51.0
PGSC0003DMG400019186 Solanum tuberosum HOM05D000018 ORTHO05D001040 6.7e-06 54.7 47 42.6
VMungo1309G1111 Vigna mungo HOM05D000018 ORTHO05D001040 6.7e-06 54.7 46 54.3
Ah.07g197520 Amaranthus hybridus HOM05D000018 ORTHO05D001040 8.7e-06 54.3 86 33.7
Carub.0001s3856 Capsella rubella HOM05D000018 ORTHO05D001040 8.7e-06 54.3 50 48.0
AUR62011213 Chenopodium quinoa HOM05D000018 ORTHO05D001040 8.7e-06 54.3 52 44.2
Migut.K00403 Erythranthe guttata HOM05D000018 ORTHO05D001040 8.7e-06 54.3 50 56.0
Hund21589 Selenicereus undatus HOM05D000018 ORTHO05D001040 8.7e-06 54.3 49 51.0


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