Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 9.8e-158 560.1 279 100.0
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 4.6e-115 418.3 286 77.3
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 1.2e-110 403.7 297 73.4
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 1.5e-110 403.3 283 73.5
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 2.0e-110 402.9 296 70.9
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 2.0e-110 402.9 285 74.7
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 3.4e-110 402.1 301 70.4
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 5.8e-110 401.4 293 71.7
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 8.4e-109 397.5 286 73.1
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 1.4e-108 396.7 261 76.6
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 1.9e-108 396.4 281 75.4
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 2.7e-107 392.5 287 71.4
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 2.7e-107 392.5 260 75.8
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 2.7e-107 392.5 283 71.4
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 3.5e-107 392.1 255 76.9
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 6.0e-107 391.3 297 70.0
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 6.0e-107 391.3 282 72.3
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 7.9e-107 391.0 290 69.7
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 1.3e-106 390.2 248 78.2
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 1.3e-106 390.2 256 77.7
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 1.8e-106 389.8 287 71.1
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 1.8e-106 389.8 259 75.7
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 2.3e-106 389.4 237 80.2
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 3.0e-106 389.0 288 69.4
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 3.9e-106 388.7 273 75.8
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 3.9e-106 388.7 285 71.2
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 3.9e-106 388.7 267 73.0
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 5.1e-106 388.3 279 72.0
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 5.1e-106 388.3 247 77.7
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 6.7e-106 387.9 285 71.2
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 1.9e-105 386.3 289 70.6
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 1.9e-105 386.3 277 71.5
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 2.5e-105 386.0 290 70.7
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 3.3e-105 385.6 262 72.5
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 4.3e-105 385.2 278 70.5
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 9.6e-105 384.0 240 78.3
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 9.6e-105 384.0 248 77.4
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 1.6e-104 383.3 231 79.2
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 2.1e-104 382.9 302 67.5
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 2.1e-104 382.9 287 71.1
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 2.1e-104 382.9 265 74.3
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 2.1e-104 382.9 289 70.2
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 2.1e-104 382.9 265 74.3
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 2.8e-104 382.5 215 84.7
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 3.6e-104 382.1 235 80.4
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 1.1e-103 380.6 256 75.8
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 1.4e-103 380.2 268 72.4
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 1.4e-103 380.2 297 67.7
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 1.8e-103 379.8 259 73.4
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 4.0e-103 378.6 265 73.2
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 9.0e-103 377.5 262 73.3
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 9.0e-103 377.5 282 70.9
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 2.0e-102 376.3 269 74.0
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 3.4e-102 375.6 245 77.1
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 1.7e-101 373.2 292 67.5
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 1.7e-101 373.2 285 68.8
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 3.8e-101 372.1 273 71.4
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 4.9e-101 371.7 300 65.0
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 6.4e-101 371.3 226 80.5
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 8.4e-101 370.9 286 69.9
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 1.1e-100 370.5 300 68.0
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 2.4e-100 369.4 338 61.5
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 4.2e-100 368.6 284 69.7
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 7.1e-100 367.9 300 66.7
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 9.3e-100 367.5 277 68.2
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 2.7e-99 365.9 264 71.6
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 2.7e-99 365.9 291 67.0
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 6.0e-99 364.8 234 75.6
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 1.3e-98 363.6 226 77.0
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 3.0e-98 362.5 263 71.1
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 5.1e-98 361.7 280 67.5
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 6.7e-98 361.3 293 66.6
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 8.7e-98 360.9 228 76.8
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 8.7e-98 360.9 228 76.8
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 8.7e-98 360.9 283 68.9
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 2.5e-97 359.4 275 68.4
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 3.3e-97 359.0 262 69.1
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 5.6e-97 358.2 282 67.7
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 7.4e-97 357.8 354 56.8
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 9.6e-97 357.5 279 67.0
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 1.3e-96 357.1 270 67.4
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.3e-96 357.1 289 65.7
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.6e-96 356.7 275 68.0
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 2.1e-96 356.3 275 68.0
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 3.7e-96 355.5 228 76.8
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 6.2e-96 354.8 228 75.9
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 1.1e-95 354.0 228 75.9
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 1.1e-95 354.0 278 66.9
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 1.4e-95 353.6 228 75.9
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 1.8e-95 353.2 289 65.7
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 6.9e-95 351.3 292 64.4
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 6.9e-95 351.3 300 63.3
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 1.5e-94 350.1 274 66.4
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 2.6e-94 349.4 254 69.3
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 7.6e-94 347.8 267 66.3
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 3.2e-92 342.4 247 70.9
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 2.5e-89 332.8 234 68.4
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 1.5e-86 323.6 242 64.5
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 3.0e-82 309.3 296 61.5
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 4.3e-81 305.4 227 69.6
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 5.5e-76 288.5 199 72.4
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 9.4e-76 287.7 242 59.5
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 4.6e-75 285.4 235 57.9
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 9.1e-71 271.2 202 63.9
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 4.5e-70 268.9 217 67.7
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 4.2e-68 262.3 225 61.3
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 1.0e-66 257.7 204 60.8
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 3.0e-66 256.1 213 61.5
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 1.1e-39 167.9 302 40.1
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 2.6e-33 146.7 194 41.2
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 4.4e-33 146.0 176 50.0
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 3.2e-31 139.8 95 76.8
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 4.1e-31 139.4 129 51.2
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 3.3e-28 129.8 118 61.9
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 1.6e-27 127.5 159 42.8
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 3.1e-26 123.2 93 71.0
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 8.3e-24 115.2 131 44.3
GSVIVG01036421001 Vitis vinifera HOM05D006690 ORTHO05D008541 9.5e-12 75.1 95 50.5
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 2.0e-09 67.4 117 38.5


User provided reference genes

Program Settings