Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 5.0e-196 687.6 344 100.0
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 2.6e-120 436.0 337 69.4
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 1.6e-117 426.8 330 68.2
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 6.1e-117 424.9 338 66.9
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 6.1e-117 424.9 337 66.2
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 1.0e-116 424.1 336 66.1
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 1.3e-116 423.7 336 68.5
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 1.8e-116 423.3 341 65.4
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 6.7e-116 421.4 339 64.9
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 1.1e-115 420.6 335 65.4
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 1.1e-115 420.6 340 65.9
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 1.9e-115 419.9 334 65.9
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 1.9e-115 419.9 334 67.4
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 2.5e-115 419.5 339 67.6
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 4.3e-115 418.7 336 65.8
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 1.6e-114 416.8 336 65.5
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 2.8e-114 416.0 340 64.7
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 2.8e-114 416.0 334 66.2
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 4.8e-114 415.2 339 65.5
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 8.2e-114 414.5 334 65.9
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 1.1e-113 414.1 337 65.9
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 1.4e-113 413.7 334 65.3
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 3.1e-113 412.5 344 63.7
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 4.1e-113 412.1 336 64.9
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 6.9e-113 411.4 343 65.0
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 1.2e-112 410.6 330 65.2
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 1.2e-112 410.6 335 64.8
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 1.2e-112 410.6 316 66.5
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 2.0e-112 409.8 339 64.9
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 2.6e-112 409.5 327 68.5
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 2.6e-112 409.5 339 64.9
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 3.4e-112 409.1 335 64.5
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 3.4e-112 409.1 315 67.9
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 4.5e-112 408.7 329 65.0
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 4.5e-112 408.7 335 65.1
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 4.5e-112 408.7 338 62.7
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 5.9e-112 408.3 342 62.3
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 7.7e-112 407.9 335 64.5
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 7.7e-112 407.9 336 62.2
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 1.3e-111 407.1 336 62.5
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 1.7e-111 406.8 331 65.6
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 2.2e-111 406.4 358 60.1
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 2.9e-111 406.0 336 63.7
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 5.0e-111 405.2 328 64.9
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 8.5e-111 404.4 336 62.2
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 1.1e-110 404.1 336 62.5
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 1.4e-110 403.7 330 64.5
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 1.4e-110 403.7 336 62.8
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 1.4e-110 403.7 313 64.9
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 2.5e-110 402.9 334 61.7
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 1.6e-109 400.2 329 64.1
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 2.7e-109 399.4 329 64.1
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 3.6e-109 399.1 339 61.9
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 3.6e-109 399.1 334 61.4
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 3.6e-109 399.1 339 62.2
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 4.6e-109 398.7 326 63.8
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 6.1e-109 398.3 339 63.1
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 6.1e-109 398.3 337 64.4
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 1.4e-108 397.1 336 63.1
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 1.8e-108 396.7 337 60.5
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 2.3e-108 396.4 327 63.6
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 2.3e-108 396.4 326 63.5
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 2.3e-108 396.4 326 63.5
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 3.0e-108 396.0 302 69.2
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 8.8e-108 394.4 326 63.2
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 1.1e-107 394.0 336 60.1
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 1.1e-107 394.0 326 63.2
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 3.3e-107 392.5 326 63.2
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 3.3e-107 392.5 329 62.9
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 5.7e-107 391.7 322 64.0
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 1.7e-106 390.2 344 61.6
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 2.8e-106 389.4 337 60.2
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 3.7e-106 389.0 344 60.8
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.0e-103 380.9 334 59.0
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 1.7e-103 380.2 337 59.1
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 7.2e-102 374.8 329 59.0
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 9.4e-102 374.4 335 62.1
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 1.4e-100 370.5 341 58.1
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 3.0e-100 369.4 199 89.4
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 3.0e-100 369.4 366 58.5
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.3e-98 364.0 334 60.2
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 2.2e-98 363.2 342 57.3
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 6.3e-98 361.7 340 60.9
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 4.1e-97 359.0 211 82.5
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 5.3e-97 358.6 213 81.2
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 1.6e-96 357.1 213 81.7
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 2.2e-95 353.2 495 46.3
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 4.0e-92 342.4 327 54.7
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 1.7e-90 337.0 317 54.3
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 6.5e-87 325.1 194 80.9
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 3.2e-86 322.8 330 51.5
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 1.8e-84 317.0 341 54.5
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 3.0e-84 316.2 334 55.4
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 3.5e-80 302.8 213 67.1
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 5.5e-78 295.4 278 59.7
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 1.4e-76 290.8 363 47.4
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 3.7e-74 282.7 339 51.0
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 9.2e-73 278.1 334 50.3
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 2.5e-70 270.0 167 77.8
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 1.0e-68 264.6 152 83.6
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 4.1e-57 226.1 125 84.0
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 1.4e-52 211.1 342 42.4
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 8.9e-52 208.4 127 79.5
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 8.3e-50 201.8 251 44.2
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 7.1e-49 198.7 320 39.4
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 8.6e-47 191.8 285 39.3
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 2.8e-45 186.8 126 70.6
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 2.1e-37 160.6 93 78.5
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 4.7e-37 159.5 233 40.8
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 5.8e-35 152.5 245 38.8
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 6.0e-24 115.9 70 77.1
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 1.1e-20 105.1 65 70.8
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 2.2e-18 97.4 54 88.9
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 6.0e-16 89.4 56 82.1
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.0e-15 88.6 60 65.0
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 1.3e-13 81.6 48 79.2
MELO3C033538.2 Cucumis melo HOM05D006459 ORTHO05D169875 7.9e-08 62.4 143 31.5
SEGI_14439 Sequoiadendron giganteum HOM05D006459 ORTHO05D385787 1.5e-06 58.2 54 46.3


User provided reference genes

Program Settings