Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A692G58 Lonicera japonica HOM05D001538 ORTHO05D000007 1.3e-194 682.9 350 100.0
Lj8A740G21 Lonicera japonica HOM05D001538 ORTHO05D000007 1.2e-72 277.7 313 56.2
Lj8C744T6 Lonicera japonica HOM05D001538 ORTHO05D000007 3.8e-66 256.1 404 42.8
Lj9C692T4 Lonicera japonica HOM05D001538 ORTHO05D000007 6.5e-58 228.8 139 86.3
Lj9C691T2 Lonicera japonica HOM05D001538 ORTHO05D000007 3.9e-47 193.0 342 42.1
Lj8C741G12 Lonicera japonica HOM05D001538 ORTHO05D000007 6.5e-42 175.6 252 48.8
Lju2422A0T21 Lonicera japonica HOM05D001538 ORTHO05D000007 8.0e-40 168.7 341 37.2
Lj4A836T53 Lonicera japonica HOM05D001538 ORTHO05D000007 1.0e-31 141.7 362 31.2
Lju521P0T33 Lonicera japonica HOM05D012945 ORTHO05D000007 2.8e-29 133.7 86 74.4
Lj2A1219T41 Lonicera japonica HOM05D001538 ORTHO05D000007 1.8e-28 131.0 94 64.9
Lj4A923G18 Lonicera japonica HOM05D004198 ORTHO05D006470 9.1e-28 128.6 107 59.8
Lju2422C0T10 Lonicera japonica HOM05D001538 ORTHO05D000007 4.5e-27 126.3 191 39.3
Lj7P482T20 Lonicera japonica HOM05D001538 ORTHO05D000007 1.0e-26 125.2 156 39.1
Lju1953C0G19 Lonicera japonica HOM05D001538 ORTHO05D000007 1.7e-26 124.4 191 38.7
Lj2C23T8 Lonicera japonica HOM05D012945 ORTHO05D000007 2.5e-25 120.6 352 28.4
Lj8C741T17 Lonicera japonica HOM05D001538 ORTHO05D000007 5.5e-25 119.4 174 37.9
Lj9C692G13 Lonicera japonica HOM05D001538 ORTHO05D000007 4.7e-24 116.3 290 30.7
Lj2A1219T39 Lonicera japonica HOM05D001538 ORTHO05D000007 4.0e-23 113.2 336 28.3
Lj2C1218T15 Lonicera japonica HOM05D001538 ORTHO05D000007 5.2e-23 112.8 201 36.3
Lj8C740T13 Lonicera japonica HOM05D001538 ORTHO05D000007 8.8e-23 112.1 140 42.1
Lj5A648T14 Lonicera japonica HOM05D010180 ORTHO05D000007 2.2e-21 107.5 342 29.2
Lj2A1218G28 Lonicera japonica HOM05D012945 ORTHO05D000007 3.7e-21 106.7 94 52.1
Lj9A98T13 Lonicera japonica HOM05D010180 ORTHO05D000007 4.1e-20 103.2 160 36.9
Lj2A887T25 Lonicera japonica HOM05D001538 ORTHO05D000007 1.6e-19 101.3 104 42.3
FvH4_7g19511 Fragaria vesca HOM05D001538 ORTHO05D000007 2.9e-18 97.1 132 37.9
RcHm_v2.0_Chr3g0453631 Rosa chinensis HOM05D001538 ORTHO05D000007 5.0e-18 96.3 152 36.2
Medtr0488s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 1.9e-17 94.4 220 34.1
FvH4_2g26101 Fragaria vesca HOM05D001538 ORTHO05D000007 5.5e-17 92.8 132 37.9
FvH4_3g10372 Fragaria vesca HOM05D001538 ORTHO05D000007 7.2e-17 92.4 157 32.5
FvH4_4g08213 Fragaria vesca HOM05D001538 ORTHO05D000007 1.2e-16 91.7 164 33.5
Lj2A1036G45 Lonicera japonica HOM05D001538 ORTHO05D000007 1.2e-16 91.7 91 47.3
FvH4_7g13962 Fragaria vesca HOM05D001538 ORTHO05D000007 2.1e-16 90.9 163 33.7
Medtr4g035630 Medicago truncatula HOM05D001538 ORTHO05D000007 2.1e-16 90.9 125 39.2
Medtr8g104770 Medicago truncatula HOM05D001538 ORTHO05D000007 2.8e-16 90.5 141 34.8
Lju2566C0T15 Lonicera japonica HOM05D012945 ORTHO05D000007 8.0e-16 89.0 286 26.2
Medtr2g438650 Medicago truncatula HOM05D001538 ORTHO05D000007 1.0e-15 88.6 181 33.1
Phvul.004G102300 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 1.8e-15 87.8 95 47.4
Psat3g128360 Pisum sativum HOM05D001538 ORTHO05D000007 5.2e-15 86.3 144 34.0
TPR.G39433 Trifolium pratense HOM05D001538 ORTHO05D000007 5.2e-15 86.3 115 39.1
Lj8P741T37 Lonicera japonica HOM05D001538 ORTHO05D000007 8.9e-15 85.5 69 66.7
TPR.G33855 Trifolium pratense HOM05D001538 ORTHO05D000007 1.2e-14 85.1 130 38.5
Medtr6g045237 Medicago truncatula HOM05D001538 ORTHO05D000007 1.5e-14 84.7 121 34.7
Lj9C305T8 Lonicera japonica HOM05D001538 ORTHO05D000007 2.0e-14 84.3 164 26.8
TPR.G27280 Trifolium pratense HOM05D001538 ORTHO05D000007 2.6e-14 84.0 115 37.4
Medtr4g108010 Medicago truncatula HOM05D001538 ORTHO05D000007 3.4e-14 83.6 129 34.1
PSO761G0353 Papaver somniferum HOM05D001538 ORTHO05D000007 3.4e-14 83.6 110 40.9
Phvul.004G102400 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 4.4e-14 83.2 124 34.7
TPR.G28466 Trifolium pratense HOM05D001538 ORTHO05D000007 4.4e-14 83.2 130 36.2
Lj4A924T29 Lonicera japonica HOM05D001538 ORTHO05D000007 5.7e-14 82.8 109 35.8
TPR.G39675 Trifolium pratense HOM05D001538 ORTHO05D000007 5.7e-14 82.8 163 31.9
TPR.G19027 Trifolium pratense HOM05D001538 ORTHO05D000007 7.5e-14 82.4 121 36.4
Lj1P271T5 Lonicera japonica HOM05D012945 ORTHO05D000007 1.7e-13 81.3 112 39.3
TPR.G13832 Trifolium pratense HOM05D001538 ORTHO05D000007 2.8e-13 80.5 124 37.1
Lj4A815T24 Lonicera japonica HOM05D012945 ORTHO05D000007 3.7e-13 80.1 266 27.1
Psat4g039840 Pisum sativum HOM05D001538 ORTHO05D000007 4.9e-13 79.7 125 37.6
Lalb_Chr09g0334161 Lupinus albus HOM05D001538 ORTHO05D000007 8.3e-13 79.0 126 34.9
Medtr0195s0010 Medicago truncatula HOM05D001538 ORTHO05D000007 8.3e-13 79.0 124 32.3
Medtr0195s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 8.3e-13 79.0 124 32.3
Phvul.002G232500 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 1.1e-12 78.6 82 45.1
Lj1P491T18 Lonicera japonica HOM05D001538 ORTHO05D000007 1.8e-12 77.8 173 27.2
Lj9P687T30 Lonicera japonica HOM05D012945 ORTHO05D000007 3.2e-12 77.0 243 27.2
Medtr4g096760 Medicago truncatula HOM05D001538 ORTHO05D000007 5.4e-12 76.3 167 29.9
TPR.G19697 Trifolium pratense HOM05D001538 ORTHO05D004353 5.4e-12 76.3 120 37.5
Phvul.001G160900 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 7.0e-12 75.9 111 36.9
Lj5P781T15 Lonicera japonica HOM05D001538 ORTHO05D000007 9.2e-12 75.5 130 27.7
Lalb_Chr02g0151671 Lupinus albus HOM05D001538 ORTHO05D000007 9.2e-12 75.5 82 45.1
Medtr5g046930 Medicago truncatula HOM05D001538 ORTHO05D000007 9.2e-12 75.5 116 37.1
TPR.G2656 Trifolium pratense HOM05D001538 ORTHO05D000007 1.2e-11 75.1 108 38.9
Aqoxy5G03703 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 1.6e-11 74.7 121 34.7
Phvul.004G102600 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 2.0e-11 74.3 73 46.6
Aqoxy5G03278 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 2.7e-11 73.9 180 31.1
Medtr8g063620 Medicago truncatula HOM05D001538 ORTHO05D000007 2.7e-11 73.9 86 39.5
Phvul.008G032300 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 2.7e-11 73.9 115 37.4
Phvul.004G102200 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 3.5e-11 73.6 104 39.4
Aqoxy2G00535 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 4.5e-11 73.2 121 33.9
Aqoxy3G01784 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 4.5e-11 73.2 128 32.0
Aqoxy3G01719 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 7.8e-11 72.4 150 32.7
Aqoxy5G01605 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.8e-11 72.4 195 30.3
Medtr0012s0140 Medicago truncatula HOM05D001538 ORTHO05D000007 7.8e-11 72.4 120 35.0
TPR.G14439 Trifolium pratense HOM05D000092 ORTHO05D000042 7.8e-11 72.4 125 33.6
Medtr1g033070 Medicago truncatula HOM05D001538 ORTHO05D000007 1.0e-10 72.0 144 33.3
Medtr3g449600 Medicago truncatula HOM05D001538 ORTHO05D000007 1.0e-10 72.0 135 33.3
Medtr7g445700 Medicago truncatula HOM05D001538 ORTHO05D000007 1.0e-10 72.0 149 32.2
FvH4_2g29541 Fragaria vesca HOM05D001538 ORTHO05D000007 1.3e-10 71.6 143 32.9
Lj3P676T23 Lonicera japonica HOM05D001538 ORTHO05D000007 1.3e-10 71.6 137 29.2
TPR.G25855 Trifolium pratense HOM05D001538 ORTHO05D000007 1.3e-10 71.6 100 43.0
Psat7g105720 Pisum sativum HOM05D001538 ORTHO05D000007 2.3e-10 70.9 79 44.3
TPR.G15478 Trifolium pratense HOM05D001538 ORTHO05D000007 2.3e-10 70.9 116 34.5
FvH4_1g13572 Fragaria vesca HOM05D001538 ORTHO05D000007 2.9e-10 70.5 145 32.4
Lju760C7G6 Lonicera japonica HOM05D012945 ORTHO05D000007 2.9e-10 70.5 310 27.1
TPR.G21298 Trifolium pratense HOM05D001538 ORTHO05D000007 2.9e-10 70.5 121 35.5
Lj5C834G10 Lonicera japonica HOM05D001538 ORTHO05D000007 3.9e-10 70.1 94 45.7
Medtr0098s0100 Medicago truncatula HOM05D001538 ORTHO05D000007 3.9e-10 70.1 76 40.8
Medtr0566s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 3.9e-10 70.1 117 31.6
Medtr1g063810 Medicago truncatula HOM05D001538 ORTHO05D000007 3.9e-10 70.1 86 34.9
Medtr5g079060 Medicago truncatula HOM05D001538 ORTHO05D000007 3.9e-10 70.1 103 36.9
Medtr7g013110 Medicago truncatula HOM05D016686 ORTHO05D000007 3.9e-10 70.1 131 32.1
FvH4_3g06911 Fragaria vesca HOM05D001538 ORTHO05D000007 6.6e-10 69.3 127 31.5
Medtr1g034250 Medicago truncatula HOM05D001538 ORTHO05D000007 6.6e-10 69.3 151 32.5
Medtr5g037520 Medicago truncatula HOM05D001538 ORTHO05D000007 6.6e-10 69.3 176 26.7
Medtr4g093740 Medicago truncatula HOM05D001538 ORTHO05D000007 8.6e-10 68.9 82 36.6
Aqoxy3G02984 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 1.1e-09 68.6 143 33.6
Phvul.001G068900 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 1.1e-09 68.6 89 37.1
Medtr5g048840 Medicago truncatula HOM05D001538 ORTHO05D000007 1.5e-09 68.2 72 38.9
Medtr8g445450 Medicago truncatula HOM05D001538 ORTHO05D000007 1.5e-09 68.2 118 34.7
TPR.G576 Trifolium pratense HOM05D001538 ORTHO05D000007 1.5e-09 68.2 82 39.0
Psat4g055000 Pisum sativum HOM05D001538 ORTHO05D000007 1.9e-09 67.8 151 31.1
TPR.G40148 Trifolium pratense HOM05D001538 ORTHO05D000007 1.9e-09 67.8 81 43.2
FvH4_7g18611 Fragaria vesca HOM05D001538 ORTHO05D000007 2.5e-09 67.4 87 39.1
TPR.G15063 Trifolium pratense HOM05D001538 ORTHO05D000007 3.3e-09 67.0 162 29.0
FvH4_4g05601 Fragaria vesca HOM05D001538 ORTHO05D000007 4.3e-09 66.6 133 31.6
Lj8C478T4 Lonicera japonica HOM05D001538 ORTHO05D000007 4.3e-09 66.6 373 24.1
Aqoxy1G02954 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 5.6e-09 66.2 136 34.6
Aqoxy2G01513 Aquilegia oxysepala HOM05D000024 ORTHO05D000007 5.6e-09 66.2 134 33.6
Lj1P173T42 Lonicera japonica HOM05D001538 ORTHO05D000007 5.6e-09 66.2 90 42.2
Medtr6g049130 Medicago truncatula HOM05D001538 ORTHO05D000007 5.6e-09 66.2 129 35.7
Medtr7g111460 Medicago truncatula HOM05D001538 ORTHO05D000007 5.6e-09 66.2 121 28.1
Aqoxy5G00984 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 7.3e-09 65.9 163 28.2
Medtr3g062250 Medicago truncatula HOM05D027863 ORTHO05D000007 7.3e-09 65.9 123 31.7
FvH4_2g03281 Fragaria vesca HOM05D001538 ORTHO05D000007 9.5e-09 65.5 122 32.0
Aqoxy1G01858 Aquilegia oxysepala HOM05D000072 ORTHO05D000026 1.2e-08 65.1 200 27.5
Medtr1g032900 Medicago truncatula HOM05D016686 ORTHO05D000007 1.2e-08 65.1 78 34.6
Aqoxy4G00948 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 2.1e-08 64.3 175 30.3
Aqoxy4G01322 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 2.1e-08 64.3 127 32.3
Medtr3g086820 Medicago truncatula HOM05D001538 ORTHO05D000007 2.1e-08 64.3 103 30.1
Aqoxy4G02792 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 2.8e-08 63.9 102 34.3
Medtr6g022050 Medicago truncatula HOM05D001538 ORTHO05D000007 4.7e-08 63.2 121 29.8
Medtr6g076110 Medicago truncatula HOM05D001538 ORTHO05D000007 4.7e-08 63.2 69 40.6
PSO541G3845 Papaver somniferum HOM05D001538 ORTHO05D000007 4.7e-08 63.2 90 38.9
Psat1g141600 Pisum sativum HOM05D001538 ORTHO05D000007 6.1e-08 62.8 82 41.5
Aqoxy4G00128 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 8.0e-08 62.4 173 30.1
Medtr5g047910 Medicago truncatula HOM05D001538 ORTHO05D000007 1.0e-07 62.0 67 43.3
Aqoxy2G02235 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.4e-07 61.6 151 29.8
Medtr2g034230 Medicago truncatula HOM05D001538 ORTHO05D000007 2.3e-07 60.8 82 34.1
PSO675G8250 Papaver somniferum HOM05D001538 ORTHO05D000007 2.3e-07 60.8 93 36.6
Medtr5g034920 Medicago truncatula HOM05D001538 ORTHO05D000007 4.0e-07 60.1 69 37.7
PSO063G6686 Papaver somniferum HOM05D002145 ORTHO05D000007 5.2e-07 59.7 110 36.4
Aqoxy5G02677 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 6.8e-07 59.3 135 31.1
Medtr7g037570 Medicago truncatula HOM05D001538 ORTHO05D000007 6.8e-07 59.3 57 47.4
TPR.G20035 Trifolium pratense HOM05D001538 ORTHO05D000007 6.8e-07 59.3 65 40.0
TPR.G28566 Trifolium pratense HOM05D001538 ORTHO05D000007 6.8e-07 59.3 67 37.3
Psat5g123120 Pisum sativum HOM05D001538 ORTHO05D000007 8.9e-07 58.9 113 33.6
Lju427A2T11 Lonicera japonica HOM05D001538 ORTHO05D000007 1.2e-06 58.5 93 33.3
Medtr5g037100 Medicago truncatula HOM05D001538 ORTHO05D000007 1.2e-06 58.5 84 36.9
TPR.G22375 Trifolium pratense HOM05D001538 ORTHO05D000007 1.2e-06 58.5 70 42.9
Medtr4g060870 Medicago truncatula HOM05D001538 ORTHO05D000007 1.5e-06 58.2 71 33.8
PSO017G2083 Papaver somniferum HOM05D002145 ORTHO05D000007 1.5e-06 58.2 116 31.9
PSO384G0156 Papaver somniferum HOM05D002145 ORTHO05D000007 1.5e-06 58.2 196 25.0
Aqoxy7G02800 Aquilegia oxysepala HOM05D000024 ORTHO05D000007 2.0e-06 57.8 135 29.6
Lju41C61G11 Lonicera japonica HOM05D001538 ORTHO05D000007 2.0e-06 57.8 30 90.0
Medtr6g042480 Medicago truncatula HOM05D001538 ORTHO05D000007 2.0e-06 57.8 75 37.3
Psat4g149040 Pisum sativum HOM05D001538 ORTHO05D000007 2.6e-06 57.4 67 44.8
Lju926C7G0 Lonicera japonica HOM05D001538 ORTHO05D000007 3.4e-06 57.0 72 34.7
Psat3g124560 Pisum sativum HOM05D001538 ORTHO05D000007 3.4e-06 57.0 114 28.9
PSO210G1058 Papaver somniferum HOM05D002145 ORTHO05D000007 4.4e-06 56.6 161 26.1
Medtr2g074890 Medicago truncatula HOM05D026100 ORTHO05D000007 5.8e-06 56.2 63 36.5
Medtr8g104170 Medicago truncatula HOM05D001538 ORTHO05D000007 5.8e-06 56.2 111 31.5
PSO764G0075 Papaver somniferum HOM05D002145 ORTHO05D000007 7.5e-06 55.8 137 24.1
PSO782G2697 Papaver somniferum HOM05D002145 ORTHO05D000007 7.5e-06 55.8 120 25.8
Medtr8g045340 Medicago truncatula HOM05D001538 ORTHO05D000007 9.8e-06 55.5 95 33.7
PSO832G2371 Papaver somniferum HOM05D002145 ORTHO05D000007 9.8e-06 55.5 150 26.7


User provided reference genes

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