Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A685T58 Lonicera japonica HOM05D006247 ORTHO05D007684 3.0e-290 1001.1 499 100.0
Cc06_g13290 Coffea canephora HOM05D006247 ORTHO05D007684 1.7e-168 596.7 552 56.9
CSS0031352 Camellia sinensis var. sinensis HOM05D006247 ORTHO05D007684 8.4e-168 594.3 555 56.8
ECA234G4502 Erigeron canadensis HOM05D006247 ORTHO05D007684 2.1e-163 579.7 558 55.4
Oeu025222.1 Olea europaea HOM05D006247 ORTHO05D007684 9.9e-161 570.9 556 55.4
HanXRQChr10g0308211 Helianthus annuus HOM05D006247 ORTHO05D007684 3.0e-157 559.3 547 53.0
Actinidia04160 Actinidia chinensis HOM05D006247 ORTHO05D007684 7.3e-156 554.7 550 54.2
Lsat_1_v5_gn_5_84660 Lactuca sativa HOM05D006247 ORTHO05D007684 6.2e-155 551.6 550 55.6
DCAR_014704 Daucus carota HOM05D006247 ORTHO05D007684 1.8e-154 550.1 546 54.8
Dinv42726 Davidia involucrata HOM05D006247 ORTHO05D007684 5.3e-154 548.5 479 61.0
Dinv43375 Davidia involucrata HOM05D006247 ORTHO05D007684 5.3e-154 548.5 479 61.0
vmacro13121 Vaccinium macrocarpon HOM05D006247 ORTHO05D007684 2.9e-152 542.7 558 53.4
MSTRG.10736 Avicennia marina HOM05D006247 ORTHO05D007684 7.1e-151 538.1 550 51.6
Glyma.17G063800 Glycine max HOM05D006247 ORTHO05D007684 1.3e-149 533.9 548 50.4
Migut.K00244 Erythranthe guttata HOM05D006247 ORTHO05D007684 3.9e-149 532.3 543 52.1
TAR383G1025 Trochodendron aralioides HOM05D006247 ORTHO05D007684 8.7e-149 531.2 545 53.2
QL02p097643 Quercus lobata HOM05D006247 ORTHO05D007684 1.6e-147 526.9 548 51.3
SalBow1G0102 Salvia bowleyana HOM05D006247 ORTHO05D007684 2.8e-147 526.2 551 51.4
Thecc.09G172600 Theobroma cacao HOM05D006247 ORTHO05D007684 8.1e-147 524.6 557 51.3
GSVIVG01029207001 Vitis vinifera HOM05D006247 ORTHO05D007684 8.1e-147 524.6 549 51.7
Solyc02g014520.4 Solanum lycopersicum HOM05D006247 ORTHO05D007684 2.4e-146 523.1 538 53.7
TWI34G1331 Tripterygium wilfordii HOM05D006247 ORTHO05D007684 2.4e-146 523.1 556 51.1
Sopen02g003860 Solanum pennellii HOM05D006247 ORTHO05D007684 5.3e-146 521.9 556 52.5
Ciclev10007836m.g Citrus clementina HOM05D006247 ORTHO05D007684 6.9e-146 521.5 549 52.3
Potri.006G168900 Populus trichocarpa HOM05D006247 ORTHO05D007684 2.6e-145 519.6 546 52.6
arahy.Tifrunner.gnm1.ann1.B1Q0FL Arachis hypogaea HOM05D006247 ORTHO05D007684 4.5e-145 518.8 548 50.4
Manes.14G152800 Manihot esculenta HOM05D006247 ORTHO05D007684 6.5e-144 515.0 547 51.4
Phvul.003G146300 Phaseolus vulgaris HOM05D006247 ORTHO05D007684 1.1e-143 514.2 548 49.5
Duzib168G0886 Durio zibethinus HOM05D006247 ORTHO05D007684 1.4e-143 513.8 567 49.9
VMungo1215G1070 Vigna mungo HOM05D006247 ORTHO05D007684 1.0e-141 507.7 550 48.9
CiPaw.07G192000 Carya illinoinensis HOM05D006247 ORTHO05D007684 3.0e-141 506.1 553 50.8
Ca_21220_v3 Cicer arietinum L. HOM05D006247 ORTHO05D007684 3.9e-141 505.8 548 49.8
Atru.chr7.645 Acer truncatum HOM05D006247 ORTHO05D007684 8.7e-141 504.6 560 50.5
Gorai.004G100200 Gossypium raimondii HOM05D006247 ORTHO05D007684 8.7e-141 504.6 543 50.5
ClCG11G012190 Citrullus lanatus HOM05D006247 ORTHO05D007684 1.5e-140 503.8 557 48.3
RcHm_v2.0_Chr4g0402581 Rosa chinensis HOM05D006247 ORTHO05D007684 1.5e-140 503.8 546 51.5
Prupe.1G086300 Prunus persica HOM05D006247 ORTHO05D007684 7.4e-140 501.5 551 49.5
Medtr4g128240 Medicago truncatula HOM05D006247 ORTHO05D007684 1.6e-139 500.4 550 48.4
Rhsim01G0005100 Rhododendron simsii HOM05D006247 ORTHO05D007684 2.4e-138 496.5 553 49.7
Gohir.D08G094300 Gossypium hirsutum HOM05D006247 ORTHO05D007684 1.5e-137 493.8 543 49.7
Gohir.A08G084700 Gossypium hirsutum HOM05D006247 ORTHO05D007684 2.0e-137 493.4 543 49.2
Lalb_Chr12g0199361 Lupinus albus HOM05D006247 ORTHO05D007684 5.8e-137 491.9 548 49.1
Sc18g0007480 Simmondsia chinensis HOM05D006247 ORTHO05D007684 6.5e-136 488.4 552 50.5
Lj4g0017814 Lotus japonicus HOM05D006247 ORTHO05D007684 1.2e-134 484.2 550 47.8
Psat4g012560 Pisum sativum HOM05D006247 ORTHO05D007684 1.2e-134 484.2 548 47.4
SGA_v2.0_scaffold12G06066 Striga asiatica HOM05D006247 ORTHO05D007684 6.7e-133 478.4 523 49.1
CANSAT11G2703 Cannabis sativa HOM05D006247 ORTHO05D007684 1.9e-132 476.9 550 47.3
Nn2g12713 Nelumbo nucifera HOM05D006247 ORTHO05D007684 5.3e-130 468.8 544 47.8
PSO170G0820 Papaver somniferum HOM05D006247 ORTHO05D007684 2.0e-129 466.8 530 49.1
A07p01840 Brassica napus HOM05D006247 ORTHO05D007684 2.6e-129 466.5 538 48.3
BraA07t27984Z Brassica rapa HOM05D006247 ORTHO05D007684 5.9e-129 465.3 537 48.4
CsaV3_2G008340 Cucumis sativus L. HOM05D006247 ORTHO05D007684 1.4e-127 460.7 546 46.2
FvH4_4g08310 Fragaria vesca HOM05D006247 ORTHO05D007684 1.9e-127 460.3 527 49.1
Aqoxy7G02323 Aquilegia oxysepala HOM05D006247 ORTHO05D007684 2.1e-126 456.8 545 46.8
PSO017G3786 Papaver somniferum HOM05D006247 ORTHO05D007684 3.6e-126 456.1 530 48.3
PGR102G2305 Punica granatum HOM05D006247 ORTHO05D007684 4.6e-126 455.7 550 45.6
Carub.0003s3308 Capsella rubella HOM05D006247 ORTHO05D007684 6.1e-126 455.3 541 48.4
AT2G18850 Arabidopsis thaliana HOM05D006247 ORTHO05D007684 5.1e-125 452.2 548 47.4
EL10Ac4g10223 Beta vulgaris HOM05D006247 ORTHO05D007684 5.1e-125 452.2 549 47.0
THA.LOC104803499 Tarenaya hassleriana HOM05D006247 ORTHO05D007684 2.0e-124 450.3 565 46.9
EL10Ac4g10218 Beta vulgaris HOM05D006247 ORTHO05D007684 4.3e-124 449.1 549 46.8
BolC7t40784H Brassica oleracea HOM05D006247 ORTHO05D007684 4.3e-124 449.1 541 47.1
C07p03920 Brassica napus HOM05D006247 ORTHO05D007684 5.7e-124 448.7 541 47.0
Sp3g32310 Schrenkiella parvula HOM05D006247 ORTHO05D007684 5.7e-124 448.7 547 47.3
Sed0001652 Sechium edule HOM05D006247 ORTHO05D007684 9.7e-124 448.0 540 46.9
BcaC06g36474 Brassica carinata HOM05D006247 ORTHO05D007684 2.2e-123 446.8 544 46.9
Eucgr.C02305 Eucalyptus grandis HOM05D006247 ORTHO05D007684 3.7e-123 446.0 493 48.9
COL.COLO4_07069 Corchorus olitorius HOM05D006247 ORTHO05D007684 1.8e-122 443.7 575 45.0
AL3G53100 Arabidopsis lyrata HOM05D006247 ORTHO05D007684 4.1e-122 442.6 547 46.6
AUR62033213 Chenopodium quinoa HOM05D006247 ORTHO05D007684 5.3e-122 442.2 571 45.9
EL10Ac8g18280 Beta vulgaris HOM05D006247 ORTHO05D007684 9.1e-122 441.4 589 44.1
AUR62021296 Chenopodium quinoa HOM05D006247 ORTHO05D007684 1.5e-121 440.7 527 48.4
Hund09028 Selenicereus undatus HOM05D006247 ORTHO05D007684 5.9e-121 438.7 551 44.6
Rhsim01G0005000 Rhododendron simsii HOM05D006247 ORTHO05D007684 1.7e-120 437.2 526 47.9
BcaB03g16669 Brassica carinata HOM05D006247 ORTHO05D007684 6.5e-120 435.3 533 47.1
TPR.G5375 Trifolium pratense HOM05D006247 ORTHO05D007684 8.5e-120 434.9 471 48.8
Sabra06G0130300 Salix brachista HOM05D006247 ORTHO05D007684 3.2e-119 433.0 559 46.7
AUR62040315 Chenopodium quinoa HOM05D006247 ORTHO05D007684 1.6e-118 430.6 518 47.3
Aa31LG8G15940 Aethionema arabicum HOM05D006247 ORTHO05D007684 1.8e-117 427.2 549 46.1
MBI14_g17363_MAGBIO Magnolia biondii HOM05D006247 ORTHO05D007684 2.8e-115 419.9 543 44.4
MELO3C004030.2 Cucumis melo HOM05D006247 ORTHO05D007684 8.2e-115 418.3 484 46.9
Thhalv10001950m.g Eutrema salsugineum HOM05D006247 ORTHO05D007684 7.0e-114 415.2 575 43.3
FAN22G0611 Fragaria x ananassa HOM05D006247 ORTHO05D007684 1.2e-113 414.5 550 44.9
CARHR109410 Cardamine hirsuta HOM05D006247 ORTHO05D007684 3.5e-113 412.9 541 46.2
FAN07G1589 Fragaria x ananassa HOM05D006247 ORTHO05D007684 8.0e-110 401.7 523 45.3
Ah.09g229830 Amaranthus hybridus HOM05D006247 ORTHO05D007684 2.6e-108 396.7 541 43.4
FAN17G2058 Fragaria x ananassa HOM05D006247 ORTHO05D007684 3.0e-101 373.2 644 38.4
HPP92_015229 Vanilla planifolia HOM05D006247 ORTHO05D007684 9.4e-95 351.7 530 39.6
ATR0580G346 Amborella trichopoda HOM05D006247 ORTHO05D007684 2.7e-89 333.6 470 41.1
Zm00001eb414720 Zea mays HOM05D006247 ORTHO05D007684 2.0e-81 307.4 454 40.5
Os08g0244400 Oryza sativa ssp. japonica HOM05D006247 ORTHO05D007684 2.7e-81 307.0 448 40.0
Hma1.2p1_3184F.1_g333740 Hydrangea macrophylla HOM05D006247 ORTHO05D007684 1.6e-78 297.7 193 71.5
Cpa.g.sc95.55 Carica papaya HOM05D006247 ORTHO05D007684 5.4e-74 282.7 281 54.8
Peaxi162Scf00113g01818 Petunia axillaris HOM05D006247 ORTHO05D007684 2.7e-73 280.4 202 66.3
Nitab4.5_0000018g0080 Nicotiana tabacum HOM05D006247 ORTHO05D007684 3.3e-71 273.5 197 67.0
CDE05G3038 Ceratophyllum demersum HOM05D006247 ORTHO05D007684 1.2e-70 271.6 407 42.5
FAN12G4057 Fragaria x ananassa HOM05D006247 ORTHO05D007684 1.6e-70 271.2 309 49.2
Nitab4.5_0019045g0010 Nicotiana tabacum HOM05D006247 ORTHO05D007684 2.3e-69 267.3 197 65.0
MD16G1258400 Malus domestica HOM05D006247 ORTHO05D007684 8.9e-69 265.4 279 52.3
arahy.Tifrunner.gnm1.ann1.M2FXAD Arachis hypogaea HOM05D006247 ORTHO05D007684 3.4e-68 263.5 201 61.2
TPR.G20696 Trifolium pratense HOM05D006247 ORTHO05D007684 2.4e-66 257.3 201 60.7
Haze_22104 Corylus avellana HOM05D006247 ORTHO05D007684 5.1e-64 249.6 199 61.3
MD16G1258300 Malus domestica HOM05D006247 ORTHO05D007684 2.3e-61 240.7 197 58.9
Mapoly0146s0042 Marchantia polymorpha HOM05D006247 ORTHO05D007684 6.0e-57 226.1 533 29.3
SHI12522 Sapria himalayana HOM05D006247 ORTHO05D007684 2.9e-51 207.2 210 51.4
AagrBONN_evm.TU.Sc2ySwM_117.653 Anthoceros agrestis HOM05D006247 ORTHO05D007684 2.7e-49 200.7 396 34.8
Peaxi162Scf00113g01819 Petunia axillaris HOM05D006247 ORTHO05D007684 1.3e-43 181.8 222 45.9
TAR383G0012 Trochodendron aralioides HOM05D006247 ORTHO05D007684 3.5e-41 173.7 138 62.3
MD13G1255300 Malus domestica HOM05D006247 ORTHO05D007684 8.7e-40 169.1 250 42.4
Glyma.13G096300 Glycine max HOM05D006247 ORTHO05D007684 1.1e-37 162.2 150 56.0
Eucgr.L03644 Eucalyptus grandis HOM05D006247 ORTHO05D007684 1.2e-36 158.7 183 48.1
Nitab4.5_0004255g0020 Nicotiana tabacum HOM05D006247 ORTHO05D007684 7.6e-36 156.0 232 42.7
Nitab4.5_0000018g0090 Nicotiana tabacum HOM05D006247 ORTHO05D007684 2.9e-35 154.1 214 43.9
CBR_g47154 Chara braunii HOM05D006247 ORTHO05D007684 1.3e-22 112.1 318 26.7
Cpa.g.sc95.54 Carica papaya HOM05D006247 ORTHO05D007684 2.1e-22 111.3 96 56.2
CBR_g35033 Chara braunii HOM05D006247 ORTHO05D007684 1.2e-12 79.0 75 40.0
CARHR109420 Cardamine hirsuta HOM05D006247 ORTHO05D007684 2.5e-10 71.2 65 56.9
Cre13.g573000 Chlamydomonas reinhardtii HOM05D006247 ORTHO05D007684 2.5e-10 71.2 239 25.5
Hma1.2p1_3184F.1_g333730 Hydrangea macrophylla HOM05D006247 ORTHO05D007684 1.0e-08 65.9 55 63.6
SMO172G0057 Selaginella moellendorffii HOM05D006247 ORTHO05D007684 3.0e-08 64.3 75 41.3
SEGI_19089 Sequoiadendron giganteum HOM05D006247 ORTHO05D007684 1.1e-07 62.4 114 40.4
SMO172G0104 Selaginella moellendorffii HOM05D006247 ORTHO05D007684 9.7e-07 59.3 152 30.3
TAR383G0048 Trochodendron aralioides HOM05D006247 ORTHO05D007684 2.2e-06 58.2 74 43.2
CBR_g35035 Chara braunii HOM05D000019 ORTHO05D000002 3.7e-06 57.4 101 31.7
Eucgr.A01370 Eucalyptus grandis HOM05D004224 ORTHO05D006437 8.2e-06 56.2 68 42.6


User provided reference genes

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