Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A656G41 Lonicera japonica HOM05D005878 ORTHO05D007433 3.3e-84 315.1 168 100.0
Lalb_Chr01g0007451 Lupinus albus HOM05D005878 ORTHO05D007433 2.4e-50 202.6 162 72.2
Aqoxy2G00498 Aquilegia oxysepala HOM05D005878 ORTHO05D007433 3.4e-49 198.7 165 65.5
Gohir.A05G398900 Gossypium hirsutum HOM05D005878 ORTHO05D007433 7.7e-49 197.6 162 66.7
Nn7g36933 Nelumbo nucifera HOM05D005878 ORTHO05D007433 1.3e-48 196.8 165 66.7
Actinidia01690 Actinidia chinensis HOM05D005878 ORTHO05D007433 1.7e-48 196.4 167 68.3
Gohir.D04G017000 Gossypium hirsutum HOM05D005878 ORTHO05D007433 2.2e-48 196.1 162 67.3
Gorai.012G019700 Gossypium raimondii HOM05D005878 ORTHO05D007433 2.2e-48 196.1 162 67.3
TAR636G2836 Trochodendron aralioides HOM05D005878 ORTHO05D007433 2.9e-48 195.7 153 69.3
Dinv02557 Davidia involucrata HOM05D005878 ORTHO05D007433 3.8e-48 195.3 164 65.9
Nitab4.5_0002838g0030 Nicotiana tabacum HOM05D005878 ORTHO05D007433 3.8e-48 195.3 130 77.7
Cfa010961 Carpinus fangiana HOM05D005878 ORTHO05D007433 6.5e-48 194.5 159 66.7
COL.COLO4_05616 Corchorus olitorius HOM05D005878 ORTHO05D007433 1.1e-47 193.7 159 67.3
CiPaw.14G010200 Carya illinoinensis HOM05D005878 ORTHO05D007433 1.4e-47 193.4 154 68.2
Ca_14245_v3 Cicer arietinum L. HOM05D005878 ORTHO05D007433 1.9e-47 193.0 162 67.9
Rhsim10G0180100 Rhododendron simsii HOM05D005878 ORTHO05D007433 1.9e-47 193.0 149 71.1
TWI38G1150 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 1.9e-47 193.0 148 66.2
Dinv32002 Davidia involucrata HOM05D005878 ORTHO05D007433 4.2e-47 191.8 126 81.7
arahy.Tifrunner.gnm1.ann1.RJ91AH Arachis hypogaea HOM05D005878 ORTHO05D007433 5.5e-47 191.4 150 69.3
TAR633G2731 Trochodendron aralioides HOM05D005878 ORTHO05D007433 7.2e-47 191.0 164 65.9
Actinidia01520 Actinidia chinensis HOM05D005878 ORTHO05D007433 1.2e-46 190.3 164 66.5
CANSAT01G2833 Cannabis sativa HOM05D005878 ORTHO05D007433 1.2e-46 190.3 166 63.9
Duzib114G0830 Durio zibethinus HOM05D005878 ORTHO05D007433 1.6e-46 189.9 151 67.5
Thecc.10G140600 Theobroma cacao HOM05D005878 ORTHO05D007433 1.6e-46 189.9 160 64.4
Cc00_g09800 Coffea canephora HOM05D005878 ORTHO05D007433 2.1e-46 189.5 162 64.8
TWI15G0528 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 2.1e-46 189.5 160 64.4
arahy.Tifrunner.gnm1.ann1.7Y8XE1 Arachis hypogaea HOM05D005878 ORTHO05D007433 3.6e-46 188.7 150 68.7
Nitab4.5_0004168g0090 Nicotiana tabacum HOM05D005878 ORTHO05D007433 3.6e-46 188.7 174 62.6
FAN01G0732 Fragaria x ananassa HOM05D005878 ORTHO05D007433 4.7e-46 188.3 162 68.5
Prupe.2G044200 Prunus persica HOM05D005878 ORTHO05D007433 4.7e-46 188.3 149 69.8
Migut.B01182 Erythranthe guttata HOM05D005878 ORTHO05D007433 6.1e-46 188.0 176 59.1
Haze_02979 Corylus avellana HOM05D005878 ORTHO05D007433 7.9e-46 187.6 177 61.0
FvH4_7g03940 Fragaria vesca HOM05D005878 ORTHO05D007433 1.0e-45 187.2 162 67.3
RcHm_v2.0_Chr1g0327631 Rosa chinensis HOM05D005878 ORTHO05D007433 1.4e-45 186.8 149 69.8
Eucgr.G03205 Eucalyptus grandis HOM05D005878 ORTHO05D007433 1.8e-45 186.4 153 67.3
Manes.11G008200 Manihot esculenta HOM05D005878 ORTHO05D007433 1.8e-45 186.4 138 71.0
CSS0046372 Camellia sinensis var. sinensis HOM05D005878 ORTHO05D007433 2.3e-45 186.0 149 69.1
FAN06G2676 Fragaria x ananassa HOM05D005878 ORTHO05D007433 3.0e-45 185.7 162 66.7
THA.LOC104799332 Tarenaya hassleriana HOM05D005878 ORTHO05D007433 3.0e-45 185.7 154 64.9
BcaB05g21635 Brassica carinata HOM05D005878 ORTHO05D007433 3.9e-45 185.3 128 75.0
BcaC03g13174 Brassica carinata HOM05D005878 ORTHO05D007433 3.9e-45 185.3 128 75.0
BolC2t06258H Brassica oleracea HOM05D005878 ORTHO05D007433 3.9e-45 185.3 128 75.0
Peaxi162Scf00220g00235 Petunia axillaris HOM05D005878 ORTHO05D007433 3.9e-45 185.3 128 76.6
PGSC0003DMG400003288 Solanum tuberosum HOM05D005878 ORTHO05D007433 5.1e-45 184.9 171 63.7
Ciclev10002378m.g Citrus clementina HOM05D005878 ORTHO05D007433 6.7e-45 184.5 162 64.2
MBI03_g46805_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 6.7e-45 184.5 154 64.9
Solyc01g096660.3 Solanum lycopersicum HOM05D005878 ORTHO05D007433 8.8e-45 184.1 171 63.7
MBI03_g45113_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 1.1e-44 183.7 154 64.9
Sopen01g040380 Solanum pennellii HOM05D005878 ORTHO05D007433 1.1e-44 183.7 169 63.9
BcaC06g32524 Brassica carinata HOM05D005878 ORTHO05D007433 2.6e-44 182.6 144 67.4
C02p02970 Brassica napus HOM05D005878 ORTHO05D007433 2.6e-44 182.6 144 68.1
SalBow2G0433 Salvia bowleyana HOM05D005878 ORTHO05D007433 2.6e-44 182.6 151 66.2
SalBow2G2419 Salvia bowleyana HOM05D005878 ORTHO05D007433 2.6e-44 182.6 151 66.2
Sc14g0005230 Simmondsia chinensis HOM05D005878 ORTHO05D007433 2.6e-44 182.6 160 63.8
ATR1136G020 Amborella trichopoda HOM05D005878 ORTHO05D007433 3.3e-44 182.2 165 61.2
PGR031G0581 Punica granatum HOM05D005878 ORTHO05D007433 3.3e-44 182.2 153 66.0
BcaNung04204 Brassica carinata HOM05D005878 ORTHO05D007433 4.4e-44 181.8 127 73.2
C09p69150 Brassica napus HOM05D005878 ORTHO05D007433 4.4e-44 181.8 127 73.2
BolC9t59659H Brassica oleracea HOM05D005878 ORTHO05D007433 4.4e-44 181.8 127 73.2
Sp6g35860 Schrenkiella parvula HOM05D005878 ORTHO05D007433 4.4e-44 181.8 162 62.3
BraA10t44928Z Brassica rapa HOM05D005878 ORTHO05D007433 9.7e-44 180.6 159 63.5
TPR.G1450 Trifolium pratense HOM05D005878 ORTHO05D007433 9.7e-44 180.6 133 72.9
AT5G07020 Arabidopsis thaliana HOM05D005878 ORTHO05D007433 1.3e-43 180.3 128 74.2
AUR62032609 Chenopodium quinoa HOM05D005878 ORTHO05D007433 1.3e-43 180.3 121 74.4
Thhalv10014567m.g Eutrema salsugineum HOM05D005878 ORTHO05D007433 1.3e-43 180.3 145 67.6
Medtr3g013460 Medicago truncatula HOM05D005878 ORTHO05D007433 1.3e-43 180.3 134 74.6
AL6G17170 Arabidopsis lyrata HOM05D005878 ORTHO05D007433 1.7e-43 179.9 128 74.2
Carub.0006s0594 Capsella rubella HOM05D005878 ORTHO05D007433 1.7e-43 179.9 128 74.2
CARHR206130 Cardamine hirsuta HOM05D005878 ORTHO05D007433 1.7e-43 179.9 143 68.5
QL04p021553 Quercus lobata HOM05D005878 ORTHO05D007433 1.7e-43 179.9 160 62.5
EL10Ac2g02748 Beta vulgaris HOM05D005878 ORTHO05D007433 2.2e-43 179.5 129 71.3
A10p28810 Brassica napus HOM05D005878 ORTHO05D007433 2.2e-43 179.5 159 62.9
Aa31sc25G160 Aethionema arabicum HOM05D005878 ORTHO05D007433 2.8e-43 179.1 119 73.9
BcaB05g21633 Brassica carinata HOM05D005878 ORTHO05D007433 2.8e-43 179.1 162 62.3
Glyma.06G309000 Glycine max HOM05D005878 ORTHO05D007433 2.8e-43 179.1 131 74.0
Phvul.005G018300 Phaseolus vulgaris HOM05D005878 ORTHO05D007433 2.8e-43 179.1 150 67.3
vmacro20585 Vaccinium macrocarpon HOM05D005878 ORTHO05D007433 3.7e-43 178.7 200 55.0
AUR62001069 Chenopodium quinoa HOM05D005878 ORTHO05D007433 4.8e-43 178.3 119 74.8
Hund13399 Selenicereus undatus HOM05D005878 ORTHO05D007433 4.8e-43 178.3 164 61.6
ECA248G2695 Erigeron canadensis HOM05D005878 ORTHO05D007433 6.3e-43 177.9 154 64.3
FAN03G0529 Fragaria x ananassa HOM05D005878 ORTHO05D007433 6.3e-43 177.9 167 64.7
MD00G1152600 Malus domestica HOM05D005878 ORTHO05D007433 8.2e-43 177.6 152 64.5
Lj3g0011478 Lotus japonicus HOM05D005878 ORTHO05D007433 1.4e-42 176.8 137 70.1
ClCG05G027000 Citrullus lanatus HOM05D005878 ORTHO05D007433 3.1e-42 175.6 150 63.3
MELO3C012494.2 Cucumis melo HOM05D005878 ORTHO05D007433 3.1e-42 175.6 142 66.2
MD07G1043600 Malus domestica HOM05D005878 ORTHO05D007433 4.1e-42 175.3 150 66.7
SGA_v2.0_scaffold430G51553 Striga asiatica HOM05D005878 ORTHO05D007433 4.1e-42 175.3 123 75.6
VMungo1080G0593 Vigna mungo HOM05D005878 ORTHO05D007433 4.1e-42 175.3 120 76.7
CsaV3_5G036960 Cucumis sativus L. HOM05D005878 ORTHO05D007433 1.6e-41 173.3 148 62.8
Glyma.04G132400 Glycine max HOM05D005878 ORTHO05D007433 1.6e-41 173.3 131 72.5
Cpa.g.sc188.4 Carica papaya HOM05D005878 ORTHO05D007433 1.0e-40 170.6 112 75.9
DCAR_006594 Daucus carota HOM05D005878 ORTHO05D007433 1.3e-40 170.2 197 51.8
MSTRG.16973 Avicennia marina HOM05D005878 ORTHO05D007433 2.2e-40 169.5 143 65.0
Oeu006783.1 Olea europaea HOM05D005878 ORTHO05D007433 3.8e-40 168.7 165 60.6
PSO339G1146 Papaver somniferum HOM05D005878 ORTHO05D007433 6.5e-40 167.9 148 60.1
Sed0004070 Sechium edule HOM05D005878 ORTHO05D007433 6.5e-40 167.9 150 60.7
Lsat_1_v5_gn_9_74980 Lactuca sativa HOM05D005878 ORTHO05D007433 4.2e-39 165.2 163 58.3
Os02g0556800 Oryza sativa ssp. japonica HOM05D005878 ORTHO05D007433 4.2e-39 165.2 111 74.8
PSO384G4469 Papaver somniferum HOM05D005878 ORTHO05D007433 2.7e-38 162.5 148 58.1
unitig_22.g5332 Utricularia gibba HOM05D005878 ORTHO05D007433 6.1e-38 161.4 172 57.6
Potri.003G192800 Populus trichocarpa HOM05D005878 ORTHO05D007433 8.0e-38 161.0 151 61.6
Zm00001eb182020 Zea mays HOM05D005878 ORTHO05D007433 1.8e-37 159.8 117 69.2
HPP92_016121 Vanilla planifolia HOM05D005878 ORTHO05D007433 3.0e-37 159.1 165 55.2
HanXRQChr11g0341301 Helianthus annuus HOM05D005878 ORTHO05D007433 4.0e-37 158.7 131 64.9
SEGI_13955 Sequoiadendron giganteum HOM05D005878 ORTHO05D007433 8.8e-37 157.5 158 57.6
A03p56860 Brassica napus HOM05D005878 ORTHO05D007433 2.6e-36 156.0 131 65.6
BraA02t04902Z Brassica rapa HOM05D005878 ORTHO05D007433 5.7e-36 154.8 172 54.7
GSVIVG01036595001 Vitis vinifera HOM05D005878 ORTHO05D007433 4.8e-35 151.8 125 64.8
Hma1.2p1_0233F.1_g098360 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 1.1e-34 150.6 104 76.9
Hma1.2p1_0233F.1_g098370 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 1.1e-34 150.6 104 76.9
AagrBONN_evm.TU.Sc2ySwM_117.450 Anthoceros agrestis HOM05D005878 ORTHO05D007433 4.1e-34 148.7 159 53.5
CDE02G0435 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 7.0e-34 147.9 121 63.6
Atru.chr12.1246 Acer truncatum HOM05D005878 ORTHO05D007433 2.0e-33 146.4 136 63.2
CDE08G0208 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 3.5e-33 145.6 160 55.6
AagrBONN_evm.TU.Sc2ySwM_117.1283 Anthoceros agrestis HOM05D005878 ORTHO05D007433 5.9e-33 144.8 120 61.7
Mapoly0116s0014 Marchantia polymorpha HOM05D005878 ORTHO05D007433 5.2e-29 131.7 163 49.7
SMO143G0125 Selaginella moellendorffii HOM05D005878 ORTHO05D007433 6.8e-29 131.3 115 63.5
Pp3c3_32790 Physcomitrium patens HOM05D005878 ORTHO05D007433 1.3e-27 127.1 141 48.9
Pp3c8_5370 Physcomitrium patens HOM05D005878 ORTHO05D007433 1.3e-27 127.1 163 47.2
Psat5g223120 Pisum sativum HOM05D005878 ORTHO05D007433 2.7e-25 119.4 145 55.2
TAR628G0990 Trochodendron aralioides HOM05D005878 ORTHO05D007433 2.7e-25 119.4 164 48.2
AUR62031722 Chenopodium quinoa HOM05D005878 ORTHO05D007433 3.6e-22 109.0 153 45.1
Atru.chr2.3038 Acer truncatum HOM05D005878 ORTHO05D007433 1.4e-13 80.5 97 49.5
BcaC03g13176 Brassica carinata HOM05D005878 ORTHO05D007433 3.0e-13 79.3 40 85.0
Eucgr.L03611 Eucalyptus grandis HOM05D005878 ORTHO05D007433 3.4e-12 75.9 40 82.5
Atru.chr7.1915 Acer truncatum HOM05D005878 ORTHO05D007433 7.5e-12 74.7 109 41.3
Atru.chr3.2623 Acer truncatum HOM05D005878 ORTHO05D007433 2.2e-11 73.2 80 52.5
CBR_g50344 Chara braunii HOM05D005878 ORTHO05D007433 2.4e-10 69.7 188 32.4
Potri.001G032200 Populus trichocarpa HOM05D005878 ORTHO05D007433 4.1e-10 68.9 141 42.6
PGSC0003DMG400040390 Solanum tuberosum HOM05D005878 ORTHO05D007433 5.9e-09 65.1 72 48.6
BolC7t45992H Brassica oleracea HOM05D005878 ORTHO05D033170 6.2e-06 55.1 62 62.9


User provided reference genes

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