Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A633T62 Lonicera japonica HOM05D001393 ORTHO05D007477 0.0e+00 1132.1 616 100.0
Actinidia21547 Actinidia chinensis HOM05D001393 ORTHO05D007477 9.9e-78 295.4 684 37.9
Dinv09348 Davidia involucrata HOM05D001393 ORTHO05D007477 3.5e-75 287.0 773 35.7
Cfa010777 Carpinus fangiana HOM05D001393 ORTHO05D007477 1.3e-64 251.9 636 35.4
GSVIVG01032121001 Vitis vinifera HOM05D001393 ORTHO05D007477 4.8e-64 250.0 643 34.5
vmacro13675 Vaccinium macrocarpon HOM05D001393 ORTHO05D007477 1.2e-62 245.4 664 36.1
CSS0038724 Camellia sinensis var. sinensis HOM05D001393 ORTHO05D007477 5.8e-62 243.0 506 38.9
Solyc11g007060.2 Solanum lycopersicum HOM05D001393 ORTHO05D007477 4.9e-61 240.0 672 34.2
Sopen11g002980 Solanum pennellii HOM05D001393 ORTHO05D007477 2.5e-60 237.7 672 34.4
CiPaw.14G000700 Carya illinoinensis HOM05D001393 ORTHO05D007477 2.3e-58 231.1 633 35.9
PGSC0003DMG401023992 Solanum tuberosum HOM05D001393 ORTHO05D007477 1.5e-57 228.4 635 32.9
CAN.G1513.5 Capsicum annuum HOM05D001393 ORTHO05D007477 6.3e-56 223.0 674 33.1
Migut.N01605 Erythranthe guttata HOM05D001393 ORTHO05D007477 1.1e-55 222.2 632 33.4
Nitab4.5_0001761g0330 Nicotiana tabacum HOM05D001393 ORTHO05D007477 5.3e-55 219.9 697 32.6
Thecc.01G409700 Theobroma cacao HOM05D001393 ORTHO05D007477 3.4e-54 217.2 637 34.4
Oeu049495.1 Olea europaea HOM05D001393 ORTHO05D007477 1.0e-53 215.7 689 32.8
Atru.chr11.2612 Acer truncatum HOM05D001393 ORTHO05D007477 5.0e-53 213.4 584 35.1
Nitab4.5_0000001g0230 Nicotiana tabacum HOM05D001393 ORTHO05D007477 8.5e-53 212.6 639 32.9
Potri.001G265100 Populus trichocarpa HOM05D001393 ORTHO05D007477 1.4e-52 211.8 578 35.5
QL04p008271 Quercus lobata HOM05D001393 ORTHO05D007477 2.5e-52 211.1 644 34.8
DCAR_029678 Daucus carota HOM05D001393 ORTHO05D007477 1.3e-50 205.3 613 33.1
Sabra16G0162900 Salix brachista HOM05D001393 ORTHO05D007477 3.0e-50 204.1 621 34.5
Manes.10G141000 Manihot esculenta HOM05D001393 ORTHO05D007477 3.3e-49 200.7 586 34.6
COL.COLO4_04862 Corchorus olitorius HOM05D001393 ORTHO05D007477 1.7e-48 198.4 631 33.3
TWI73G0713 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 1.7e-48 198.4 444 39.6
Duzib133G0545 Durio zibethinus HOM05D001393 ORTHO05D007477 2.8e-48 197.6 596 34.9
SalBow7G4183 Salvia bowleyana HOM05D001393 ORTHO05D007477 6.3e-48 196.4 608 34.0
Ciclev10030722m.g Citrus clementina HOM05D001393 ORTHO05D007477 1.4e-47 195.3 627 32.5
Prupe.2G015000 Prunus persica HOM05D001393 ORTHO05D007477 2.4e-47 194.5 604 34.8
CANSAT80G1121 Cannabis sativa HOM05D001393 ORTHO05D007477 6.9e-47 193.0 586 32.3
MSTRG.28063 Avicennia marina HOM05D001393 ORTHO05D007477 1.2e-46 192.2 702 30.8
FAN03G1765 Fragaria x ananassa HOM05D001393 ORTHO05D007477 2.9e-45 187.6 656 30.9
FAN03G3510 Fragaria x ananassa HOM05D001393 ORTHO05D007477 2.9e-45 187.6 656 30.9
PGR044G2234 Punica granatum HOM05D001393 ORTHO05D007477 2.9e-45 187.6 596 32.7
FAN06G3336 Fragaria x ananassa HOM05D001393 ORTHO05D007477 3.2e-44 184.1 612 33.3
FvH4_7g01170 Fragaria vesca HOM05D001393 ORTHO05D007477 5.5e-44 183.3 612 33.3
Sc11g0009120 Simmondsia chinensis HOM05D001393 ORTHO05D007477 1.6e-43 181.8 566 31.6
SalBow6G6124 Salvia bowleyana HOM05D001393 ORTHO05D007477 2.1e-43 181.4 378 39.2
Peaxi162Scf00152g01336 Petunia axillaris HOM05D001393 ORTHO05D007477 3.6e-43 180.6 718 28.1
HanXRQChr09g0251311 Helianthus annuus HOM05D001393 ORTHO05D007477 6.1e-43 179.9 574 34.5
Cpa.g.sc125.11 Carica papaya HOM05D001393 ORTHO05D007477 1.4e-42 178.7 580 32.6
Cc02_g28120 Coffea canephora HOM05D001393 ORTHO05D007477 1.4e-42 178.7 325 38.8
ClCG09G004070 Citrullus lanatus HOM05D001393 ORTHO05D007477 1.8e-42 178.3 583 33.3
MD02G1309200 Malus domestica HOM05D001393 ORTHO05D007477 8.8e-42 176.0 579 33.0
RcHm_v2.0_Chr1g0316471 Rosa chinensis HOM05D001393 ORTHO05D007477 8.8e-42 176.0 587 31.7
TAR623G0231 Trochodendron aralioides HOM05D001393 ORTHO05D007477 1.1e-41 175.6 375 39.7
MD07G1012500 Malus domestica HOM05D001393 ORTHO05D007477 4.4e-41 173.7 315 42.2
Nn2g15307 Nelumbo nucifera HOM05D001393 ORTHO05D007477 2.8e-40 171.0 739 29.6
Potri.009G060000 Populus trichocarpa HOM05D001393 ORTHO05D007477 4.8e-40 170.2 398 36.9
Gohir.A08G143900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 6.3e-40 169.9 604 31.8
FAN01G2686 Fragaria x ananassa HOM05D001393 ORTHO05D007477 8.2e-40 169.5 612 32.0
SGA_v2.0_scaffold5G02964 Striga asiatica HOM05D001393 ORTHO05D007477 1.4e-39 168.7 614 32.4
EL10Ac2g04339 Beta vulgaris HOM05D001393 ORTHO05D007477 1.8e-39 168.3 575 31.8
CsaV3_7G030970 Cucumis sativus L. HOM05D001393 ORTHO05D007477 2.4e-39 167.9 601 32.1
Duzib138G1437 Durio zibethinus HOM05D001393 ORTHO05D007477 1.5e-38 165.2 637 32.7
Gorai.004G171900 Gossypium raimondii HOM05D001393 ORTHO05D007477 1.5e-38 165.2 602 31.7
Eucgr.J01280 Eucalyptus grandis HOM05D001393 ORTHO05D007477 3.4e-38 164.1 590 30.3
Gohir.D08G164900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 4.5e-38 163.7 602 31.7
AUR62009391 Chenopodium quinoa HOM05D001393 ORTHO05D007477 2.9e-37 161.0 620 31.0
Sed0015725 Sechium edule HOM05D001393 ORTHO05D007477 1.1e-36 159.1 616 32.0
AUR62023073 Chenopodium quinoa HOM05D001393 ORTHO05D007477 9.4e-36 156.0 608 30.8
TWI09G0484 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 9.4e-36 156.0 457 35.2
Ah.10g038800 Amaranthus hybridus HOM05D001393 ORTHO05D007477 1.6e-35 155.2 568 29.9
MSTRG.5028 Avicennia marina HOM05D001393 ORTHO05D007477 1.0e-34 152.5 727 28.1
Lj3g0000057 Lotus japonicus HOM05D001393 ORTHO05D007477 1.4e-34 152.1 667 28.5
Glyma.12G007700 Glycine max HOM05D001393 ORTHO05D007477 6.7e-34 149.8 676 28.6
MELO3C023559.2 Cucumis melo HOM05D001393 ORTHO05D007477 2.6e-33 147.9 653 28.9
Hund21482 Selenicereus undatus HOM05D001393 ORTHO05D007477 9.7e-33 146.0 675 29.5
ECA248G1228 Erigeron canadensis HOM05D001393 ORTHO05D007477 2.2e-32 144.8 568 32.2
PSO384G0142 Papaver somniferum HOM05D001393 ORTHO05D007477 4.8e-32 143.7 664 27.7
arahy.Tifrunner.gnm1.ann1.C4Q3NJ Arachis hypogaea HOM05D001393 ORTHO05D007477 1.8e-31 141.7 597 30.2
MBI04_g36081_MAGBIO Magnolia biondii HOM05D001393 ORTHO05D007477 3.1e-31 141.0 396 34.6
Psat7g196360 Pisum sativum HOM05D001393 ORTHO05D007477 1.2e-30 139.0 603 30.5
PSO339G5226 Papaver somniferum HOM05D001393 ORTHO05D007477 1.6e-30 138.7 661 27.1
Phvul.011G009600 Phaseolus vulgaris HOM05D001393 ORTHO05D007477 1.6e-30 138.7 662 27.3
Aqoxy1G00280 Aquilegia oxysepala HOM05D001393 ORTHO05D007477 3.5e-30 137.5 404 33.4
arahy.Tifrunner.gnm1.ann1.S6CP9J Arachis hypogaea HOM05D001393 ORTHO05D007477 5.9e-30 136.7 597 30.0
VMungo1127G2137 Vigna mungo HOM05D001393 ORTHO05D007477 2.9e-29 134.4 641 29.2
Glyma.09G228900 Glycine max HOM05D001393 ORTHO05D007477 2.5e-28 131.3 696 27.2
Medtr4g037495 Medicago truncatula HOM05D001393 ORTHO05D007477 2.5e-28 131.3 630 27.9
Sabra09G0044200 Salix brachista HOM05D001393 ORTHO05D007477 9.4e-28 129.4 394 34.3
TPR.G3660 Trifolium pratense HOM05D001393 ORTHO05D007477 6.1e-27 126.7 634 27.6
Aa31LG11G7400 Aethionema arabicum HOM05D001393 ORTHO05D007477 1.2e-25 122.5 585 28.9
Dinv43433 Davidia involucrata HOM05D001393 ORTHO05D007477 1.5e-25 122.1 112 65.2
Ca_19581_v3 Cicer arietinum L. HOM05D001393 ORTHO05D007477 3.5e-22 110.9 594 28.5
Lalb_Chr19g0140311 Lupinus albus HOM05D001393 ORTHO05D007477 1.3e-21 109.0 680 26.6
Thhalv10003674m.g Eutrema salsugineum HOM05D001393 ORTHO05D007477 2.5e-20 104.8 556 27.2
BolC7t44402H Brassica oleracea HOM05D001393 ORTHO05D007477 5.5e-20 103.6 577 27.6
C07p38830 Brassica napus HOM05D001393 ORTHO05D007477 3.6e-19 100.9 577 27.4
CARHR184320 Cardamine hirsuta HOM05D001393 ORTHO05D007477 1.4e-18 99.0 541 26.1
Lsat_1_v5_gn_1_106561 Lactuca sativa HOM05D001393 ORTHO05D007477 3.4e-17 94.4 634 26.0
Dinv43435 Davidia involucrata HOM05D001393 ORTHO05D007477 7.5e-17 93.2 237 35.4
Carub.0008s0749 Capsella rubella HOM05D001393 ORTHO05D007477 9.8e-17 92.8 598 27.1
Os07g0569000 Oryza sativa ssp. japonica HOM05D001393 ORTHO05D007477 1.7e-16 92.0 342 29.2
AT5G47940 Arabidopsis thaliana HOM05D001393 ORTHO05D007477 2.2e-16 91.7 594 25.9
A06p39440 Brassica napus HOM05D001393 ORTHO05D007477 2.8e-16 91.3 602 26.4
BraA06t26859Z Brassica rapa HOM05D001393 ORTHO05D007477 2.8e-16 91.3 602 26.4
HPP92_015712 Vanilla planifolia HOM05D001393 ORTHO05D007477 2.8e-16 91.3 426 28.4
Sp2g18440 Schrenkiella parvula HOM05D001393 ORTHO05D007477 4.8e-16 90.5 639 25.5
Dinv43434 Davidia involucrata HOM05D001393 ORTHO05D007477 6.3e-16 90.1 103 56.3
BcaC06g30834 Brassica carinata HOM05D001393 ORTHO05D007477 2.4e-15 88.2 353 28.9
HPP92_026649 Vanilla planifolia HOM05D001393 ORTHO05D007477 2.4e-15 88.2 399 29.3
Zm00001eb324710 Zea mays HOM05D001393 ORTHO05D007477 3.1e-15 87.8 320 30.6
AL8G20040 Arabidopsis lyrata HOM05D001393 ORTHO05D007477 4.1e-15 87.4 587 26.9
Eucgr.J01288 Eucalyptus grandis HOM05D001393 ORTHO05D007477 8.6e-13 79.7 110 42.7
ATR0332G069 Amborella trichopoda HOM05D001393 ORTHO05D007477 2.1e-11 75.1 106 48.1
Zm00001eb107220 Zea mays HOM05D001393 ORTHO05D007477 8.0e-11 73.2 315 27.9
unitig_578.g16692 Utricularia gibba HOM05D001393 ORTHO05D007477 1.8e-10 72.0 655 23.4
SEGI_24281 Sequoiadendron giganteum HOM05D000890 ORTHO05D007477 5.7e-09 67.0 94 42.6
SEGI_29291 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 5.7e-09 67.0 94 42.6
CDE05G0268 Ceratophyllum demersum HOM05D001393 ORTHO05D007477 2.8e-08 64.7 594 23.7


User provided reference genes

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