Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A629T99 Lonicera japonica HOM05D005285 ORTHO05D006829 1.1e-212 743.0 360 100.0
Dinv09380 Davidia involucrata HOM05D005285 ORTHO05D006829 3.3e-190 668.3 366 88.3
Actinidia20684 Actinidia chinensis HOM05D005285 ORTHO05D006829 5.4e-185 651.0 362 87.0
Rhsim01G0131200 Rhododendron simsii HOM05D005285 ORTHO05D006829 1.2e-184 649.8 369 84.8
CSS0013341 Camellia sinensis var. sinensis HOM05D005285 ORTHO05D006829 1.0e-183 646.7 363 86.2
GSVIVG01032048001 Vitis vinifera HOM05D005285 ORTHO05D006829 2.3e-183 645.6 366 84.7
Peaxi162Scf00042g00510 Petunia axillaris HOM05D005285 ORTHO05D006829 8.7e-183 643.7 357 86.3
Lsat_1_v5_gn_1_109141 Lactuca sativa HOM05D005285 ORTHO05D006829 4.3e-182 641.3 360 86.1
Hma1.2p1_1011F.1_g247500 Hydrangea macrophylla HOM05D005285 ORTHO05D006829 2.1e-181 639.0 389 80.7
Gohir.A08G026900 Gossypium hirsutum HOM05D005285 ORTHO05D006829 1.4e-180 636.3 362 85.6
Oeu064272.1 Olea europaea HOM05D005285 ORTHO05D006829 1.8e-180 636.0 358 85.2
Gorai.004G035700 Gossypium raimondii HOM05D005285 ORTHO05D006829 3.1e-180 635.2 362 85.6
Nitab4.5_0002012g0040 Nicotiana tabacum HOM05D005285 ORTHO05D006829 3.1e-180 635.2 355 85.9
Cfa010729 Carpinus fangiana HOM05D005285 ORTHO05D006829 4.0e-180 634.8 360 85.6
Haze_03242 Corylus avellana HOM05D005285 ORTHO05D006829 4.0e-180 634.8 360 85.3
Cc02_g27470 Coffea canephora HOM05D005285 ORTHO05D006829 5.3e-180 634.4 364 84.1
Thecc.01G414500 Theobroma cacao HOM05D005285 ORTHO05D006829 5.3e-180 634.4 360 85.6
TAR636G1692 Trochodendron aralioides HOM05D005285 ORTHO05D006829 2.6e-179 632.1 360 83.9
Gohir.D08G037700 Gossypium hirsutum HOM05D005285 ORTHO05D006829 4.5e-179 631.3 362 85.1
DCAR_029637 Daucus carota HOM05D005285 ORTHO05D006829 7.6e-179 630.6 357 85.7
Duzib268G1126 Durio zibethinus HOM05D005285 ORTHO05D006829 1.3e-178 629.8 360 84.4
Nn7g36086 Nelumbo nucifera HOM05D005285 ORTHO05D006829 6.4e-178 627.5 365 82.2
QL04p004838 Quercus lobata HOM05D005285 ORTHO05D006829 8.4e-178 627.1 360 84.7
Potri.001G271100 Populus trichocarpa HOM05D005285 ORTHO05D006829 1.1e-177 626.7 367 82.8
Nitab4.5_0000050g0030 Nicotiana tabacum HOM05D005285 ORTHO05D006829 1.9e-177 625.9 353 85.0
TWI09G0675 Tripterygium wilfordii HOM05D005285 ORTHO05D006829 1.9e-177 625.9 358 83.2
Sopen10g011740 Solanum pennellii HOM05D005285 ORTHO05D006829 2.4e-177 625.5 357 84.3
Migut.B01343 Erythranthe guttata HOM05D005285 ORTHO05D006829 9.3e-177 623.6 361 82.5
ClCG10G012540 Citrullus lanatus HOM05D005285 ORTHO05D006829 1.6e-176 622.9 361 83.4
ECA248G0026 Erigeron canadensis HOM05D005285 ORTHO05D006829 1.6e-176 622.9 358 83.5
Oeu039102.1 Olea europaea HOM05D005285 ORTHO05D006829 2.1e-176 622.5 359 84.1
MSTRG.20606 Avicennia marina HOM05D005285 ORTHO05D006829 2.7e-176 622.1 364 83.5
PGR044G0372 Punica granatum HOM05D005285 ORTHO05D006829 7.9e-176 620.5 364 82.1
Ciclev10031943m.g Citrus clementina HOM05D005285 ORTHO05D006829 1.8e-175 619.4 358 83.2
Manes.10G147800 Manihot esculenta HOM05D005285 ORTHO05D006829 2.3e-175 619.0 367 81.5
Sed0014745 Sechium edule HOM05D005285 ORTHO05D006829 6.7e-175 617.5 362 81.2
Cpa.g.sc234.2 Carica papaya HOM05D005285 ORTHO05D006829 2.5e-174 615.5 364 80.5
Eucgr.J01257 Eucalyptus grandis HOM05D005285 ORTHO05D006829 3.3e-174 615.1 365 80.8
FAN03G1002 Fragaria x ananassa HOM05D005285 ORTHO05D006829 4.3e-174 614.8 358 82.1
SalBow5G3096 Salvia bowleyana HOM05D005285 ORTHO05D006829 9.6e-174 613.6 365 81.4
MBI04_g14265_MAGBIO Magnolia biondii HOM05D005285 ORTHO05D006829 1.6e-173 612.8 355 82.3
SalBow5G3836 Salvia bowleyana HOM05D005285 ORTHO05D006829 2.8e-173 612.1 365 81.1
FvH4_7g00610 Fragaria vesca HOM05D005285 ORTHO05D006829 3.7e-173 611.7 358 82.4
FAN06G0391 Fragaria x ananassa HOM05D005285 ORTHO05D006829 3.7e-173 611.7 358 82.4
FAN10G3755 Fragaria x ananassa HOM05D005285 ORTHO05D006829 6.2e-173 610.9 358 82.4
Lalb_Chr03g0033921 Lupinus albus HOM05D005285 ORTHO05D006829 8.1e-173 610.5 354 81.1
FAN01G1197 Fragaria x ananassa HOM05D005285 ORTHO05D006829 1.8e-172 609.4 358 82.1
PSO339G1127 Papaver somniferum HOM05D005285 ORTHO05D006829 3.1e-172 608.6 368 79.1
TWI53G0546 Tripterygium wilfordii HOM05D005285 ORTHO05D006829 4.0e-172 608.2 360 80.8
CsaV3_3G032330 Cucumis sativus L. HOM05D005285 ORTHO05D006829 1.2e-171 606.7 361 81.2
Aqoxy2G00109 Aquilegia oxysepala HOM05D005285 ORTHO05D006829 1.5e-171 606.3 359 79.7
SGA_v2.0_scaffold646G53323 Striga asiatica HOM05D005285 ORTHO05D006829 2.0e-171 605.9 359 81.6
COL.COLO4_23903 Corchorus olitorius HOM05D005285 ORTHO05D006829 2.6e-171 605.5 350 84.0
MELO3C023957.2 Cucumis melo HOM05D005285 ORTHO05D006829 3.4e-171 605.1 361 81.4
CANSAT21G0587 Cannabis sativa HOM05D005285 ORTHO05D006829 5.8e-171 604.4 358 81.0
vmacro21170 Vaccinium macrocarpon HOM05D005285 ORTHO05D006829 5.8e-171 604.4 416 74.3
RcHm_v2.0_Chr1g0314801 Rosa chinensis HOM05D005285 ORTHO05D006829 7.6e-171 604.0 358 81.6
arahy.Tifrunner.gnm1.ann1.DICK3U Arachis hypogaea HOM05D005285 ORTHO05D006829 1.3e-170 603.2 354 80.8
Glyma.12G239400 Glycine max HOM05D005285 ORTHO05D006829 1.7e-170 602.8 354 81.9
MD07G1005600 Malus domestica HOM05D005285 ORTHO05D006829 1.7e-170 602.8 355 81.4
Aa31LG11G7560 Aethionema arabicum HOM05D005285 ORTHO05D006829 2.2e-170 602.4 360 80.8
PSO384G1382 Papaver somniferum HOM05D005285 ORTHO05D006829 3.8e-170 601.7 366 79.0
MD02G1316300 Malus domestica HOM05D005285 ORTHO05D006829 4.9e-170 601.3 355 82.0
Phvul.011G213800 Phaseolus vulgaris HOM05D005285 ORTHO05D006829 4.9e-170 601.3 354 82.2
Eucgr.J01254 Eucalyptus grandis HOM05D005285 ORTHO05D006829 1.1e-169 600.1 365 78.4
Eucgr.J01253 Eucalyptus grandis HOM05D005285 ORTHO05D006829 1.4e-169 599.7 365 78.1
Eucgr.J01256 Eucalyptus grandis HOM05D005285 ORTHO05D006829 1.4e-169 599.7 365 78.1
EL10Ac2g04308 Beta vulgaris HOM05D005285 ORTHO05D006829 5.5e-169 597.8 355 80.3
Psat4g195080 Pisum sativum HOM05D005285 ORTHO05D006829 7.1e-169 597.4 354 80.5
VMungo1127G2059 Vigna mungo HOM05D005285 ORTHO05D006829 7.1e-169 597.4 354 81.6
THA.LOC104819060 Tarenaya hassleriana HOM05D005285 ORTHO05D006829 9.3e-169 597.0 360 79.4
unitig_26.g9596 Utricularia gibba HOM05D005285 ORTHO05D006829 9.3e-169 597.0 355 79.4
Lj3g0011351 Lotus japonicus HOM05D005285 ORTHO05D006829 2.7e-168 595.5 353 80.5
Hund03676 Selenicereus undatus HOM05D005285 ORTHO05D006829 3.5e-168 595.1 346 81.8
Lj9C629T1 Lonicera japonica HOM05D005285 ORTHO05D006829 7.9e-168 594.0 352 81.8
Medtr8g036165 Medicago truncatula HOM05D005285 ORTHO05D006829 7.9e-168 594.0 354 80.5
AUR62023050 Chenopodium quinoa HOM05D005285 ORTHO05D006829 1.0e-167 593.6 354 80.5
Sp2g18470 Schrenkiella parvula HOM05D005285 ORTHO05D006829 1.8e-167 592.8 354 80.8
Hund03675 Selenicereus undatus HOM05D005285 ORTHO05D006829 2.3e-167 592.4 386 74.9
Thhalv10004473m.g Eutrema salsugineum HOM05D005285 ORTHO05D006829 1.9e-166 589.3 357 79.0
Carub.0008s0757 Capsella rubella HOM05D005285 ORTHO05D006829 2.5e-166 589.0 357 79.8
CDE04G1667 Ceratophyllum demersum HOM05D005285 ORTHO05D006829 3.3e-166 588.6 367 75.7
AL8G20280 Arabidopsis lyrata HOM05D005285 ORTHO05D006829 9.6e-166 587.0 357 79.6
AT5G48020 Arabidopsis thaliana HOM05D005285 ORTHO05D006829 2.8e-165 585.5 357 78.7
A06p39410 Brassica napus HOM05D005285 ORTHO05D006829 8.2e-165 583.9 354 79.9
BraA06t26856Z Brassica rapa HOM05D005285 ORTHO05D006829 8.2e-165 583.9 354 79.9
BcaC06g30830 Brassica carinata HOM05D005285 ORTHO05D006829 3.1e-164 582.0 354 79.4
Sabra16G0166500 Salix brachista HOM05D005285 ORTHO05D006829 9.0e-164 580.5 438 68.7
Ca_23856_v3 Cicer arietinum L. HOM05D005285 ORTHO05D006829 2.6e-163 578.9 354 78.8
ATR0605G013 Amborella trichopoda HOM05D005285 ORTHO05D006829 3.4e-163 578.6 364 76.1
BolC7t44405H Brassica oleracea HOM05D005285 ORTHO05D006829 1.0e-162 577.0 354 79.1
C07p38860 Brassica napus HOM05D005285 ORTHO05D006829 3.8e-162 575.1 354 79.1
CARHR184290 Cardamine hirsuta HOM05D005285 ORTHO05D006829 3.8e-162 575.1 357 77.0
Zm00001eb189240 Zea mays HOM05D005285 ORTHO05D006829 6.5e-162 574.3 354 76.0
FAN01G1198 Fragaria x ananassa HOM05D005285 ORTHO05D006829 1.9e-161 572.8 450 65.6
Os02g0717500 Oryza sativa ssp. japonica HOM05D005285 ORTHO05D006829 5.5e-161 571.2 357 74.8
SGA_v2.0_scaffold646G53324 Striga asiatica HOM05D005285 ORTHO05D006829 7.1e-161 570.9 453 62.7
SEGI_06931 Sequoiadendron giganteum HOM05D005285 ORTHO05D006829 1.6e-157 559.7 371 72.0
AUR62009369 Chenopodium quinoa HOM05D005285 ORTHO05D006829 1.2e-155 553.5 330 80.3
Lsat_1_v5_gn_1_111020 Lactuca sativa HOM05D005285 ORTHO05D006829 2.2e-154 549.3 359 72.7
ECA248G2079 Erigeron canadensis HOM05D005285 ORTHO05D006829 6.5e-154 547.7 356 73.9
ECA248G2524 Erigeron canadensis HOM05D005285 ORTHO05D006829 2.1e-152 542.7 357 72.3
HanXRQChr11g0330581 Helianthus annuus HOM05D005285 ORTHO05D006829 1.0e-151 540.4 359 71.9
Atru.chr11.2010 Acer truncatum HOM05D005285 ORTHO05D006829 1.4e-151 540.0 350 74.0
QL04p004878 Quercus lobata HOM05D005285 ORTHO05D006829 6.7e-151 537.7 360 71.4
AagrBONN_evm.TU.Sc2ySwM_228.3236 Anthoceros agrestis HOM05D005285 ORTHO05D006829 6.9e-148 527.7 361 67.9
QL04p004868 Quercus lobata HOM05D005285 ORTHO05D006829 9.1e-148 527.3 360 69.2
HanXRQChr11g0330561 Helianthus annuus HOM05D005285 ORTHO05D006829 7.7e-147 524.2 358 69.6
Atru.chr11.2632 Acer truncatum HOM05D005285 ORTHO05D006829 1.0e-146 523.9 386 71.0
QL04p004849 Quercus lobata HOM05D005285 ORTHO05D006829 1.7e-146 523.1 361 67.3
Prupe.2G008000 Prunus persica HOM05D005285 ORTHO05D006829 1.1e-140 503.8 274 88.0
Mapoly0019s0106 Marchantia polymorpha HOM05D005285 ORTHO05D006829 9.1e-140 500.7 356 66.0
SHI04065 Sapria himalayana HOM05D000259 ORTHO05D000155 1.0e-138 497.3 519 52.4
SMO364G0792 Selaginella moellendorffii HOM05D005285 ORTHO05D006829 6.5e-138 494.6 353 64.6
Prupe.2G008200 Prunus persica HOM05D005285 ORTHO05D006829 1.9e-129 466.5 255 86.7
Sc11g0009350 Simmondsia chinensis HOM05D005285 ORTHO05D006829 1.5e-126 456.8 270 81.5
Sed0008744 Sechium edule HOM05D005285 ORTHO05D006829 8.3e-125 451.1 344 68.3
Pp3c17_23530 Physcomitrium patens HOM05D005285 ORTHO05D006829 5.4e-124 448.4 384 57.6
HPP92_022786 Vanilla planifolia HOM05D005285 ORTHO05D006829 3.0e-119 432.6 273 75.5
Lsat_1_v5_gn_1_72821 Lactuca sativa HOM05D005285 ORTHO05D006829 7.5e-110 401.4 345 59.1
Ca_24082_v3 Cicer arietinum L. HOM05D005285 ORTHO05D006829 4.0e-103 379.0 345 53.9
Cre13.g586400 Chlamydomonas reinhardtii HOM05D005285 ORTHO05D006829 3.4e-102 375.9 378 50.5
Pp3c14_26250 Physcomitrium patens HOM05D005285 ORTHO05D006829 2.3e-98 363.2 241 69.7
Solyc10g037950.2 Solanum lycopersicum HOM05D005285 ORTHO05D006829 1.7e-90 337.0 197 82.2
arahy.Tifrunner.gnm1.ann1.A7HRCY Arachis hypogaea HOM05D005285 ORTHO05D006829 5.8e-86 322.0 269 62.5
HanXRQChr11g0330591 Helianthus annuus HOM05D005285 ORTHO05D006829 1.3e-85 320.9 223 70.4
Solyc10g037960.3 Solanum lycopersicum HOM05D005285 ORTHO05D006829 6.2e-80 302.0 176 81.8
TPR.G21737 Trifolium pratense HOM05D005285 ORTHO05D006829 6.8e-79 298.5 162 85.8
Eucgr.L03705 Eucalyptus grandis HOM05D005285 ORTHO05D006829 3.4e-78 296.2 180 78.9
HanXRQChr01g0017351 Helianthus annuus HOM05D005285 ORTHO05D006829 1.6e-75 287.3 179 74.3
TPR.G21746 Trifolium pratense HOM05D005285 ORTHO05D006829 6.2e-72 275.4 180 73.3
Ca_24079_v3 Cicer arietinum L. HOM05D005285 ORTHO05D006829 1.2e-62 244.6 349 42.4
Cpa.g.sc2760.1 Carica papaya HOM05D005285 ORTHO05D006829 1.2e-59 234.6 174 63.2
Rhsim06G0016300 Rhododendron simsii HOM05D005285 ORTHO05D006829 3.4e-54 216.5 118 89.0
Peaxi162Scf00451g00621 Petunia axillaris HOM05D005285 ORTHO05D006829 2.7e-51 206.8 170 62.9
HanXRQChr11g0330601 Helianthus annuus HOM05D005285 ORTHO05D006829 3.5e-43 179.9 106 77.4
Actinidia21565 Actinidia chinensis HOM05D005285 ORTHO05D006829 8.2e-40 168.7 106 79.2
Oeu039103.1 Olea europaea HOM05D005285 ORTHO05D008854 2.6e-38 163.7 91 86.8
Oeu039101.1 Olea europaea HOM05D000288 ORTHO05D000173 6.5e-29 132.5 88 75.0
Atru.ctg794.7 Acer truncatum HOM05D005285 ORTHO05D037890 2.2e-24 117.5 177 42.4
TPR.G13313 Trifolium pratense HOM05D005285 ORTHO05D413460 7.2e-20 102.4 77 63.6
CDE07G0090 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 9.4e-20 102.1 232 30.6
arahy.Tifrunner.gnm1.ann1.J91U4H Arachis hypogaea HOM05D000001 ORTHO05D004533 1.4e-18 98.2 62 69.4
vmacro21176 Vaccinium macrocarpon HOM05D005285 ORTHO05D006829 1.4e-18 98.2 112 51.8
Atru.chr13.2215 Acer truncatum HOM05D005285 ORTHO05D037890 3.7e-16 90.1 55 72.7
Lsat_1_v5_gn_0_6420 Lactuca sativa HOM05D002112 ORTHO05D007960 4.8e-16 89.7 83 56.6
VMungo1127G1344 Vigna mungo HOM05D000839 ORTHO05D000664 6.3e-16 89.4 68 67.6
arahy.Tifrunner.gnm1.ann1.43BKZS Arachis hypogaea HOM05D000001 ORTHO05D000003 2.2e-13 80.9 47 74.5
TPR.G1074 Trifolium pratense HOM05D005285 ORTHO05D411165 2.2e-08 64.3 74 45.9
arahy.Tifrunner.gnm1.ann1.81AB3J Arachis hypogaea HOM05D000001 ORTHO05D084391 7.0e-07 59.3 43 58.1
QL11p038890 Quercus lobata HOM05D000018 ORTHO05D001172 2.0e-06 57.8 364 23.1
QL11p040202 Quercus lobata HOM05D000018 ORTHO05D001172 2.0e-06 57.8 364 23.4
Lsat_1_v5_gn_9_64201 Lactuca sativa HOM05D000310 ORTHO05D005377 7.7e-06 55.8 32 78.1


User provided reference genes

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