Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A612T47 Lonicera japonica HOM05D001900 ORTHO05D009822 2.3e-27 124.8 60 100.0
Lj9C614G16 Lonicera japonica HOM05D001900 ORTHO05D009822 6.8e-24 113.2 56 96.4
Cc02_g26280 Coffea canephora HOM05D001900 ORTHO05D009822 1.3e-19 99.0 53 83.0
SalBow5G2409 Salvia bowleyana HOM05D001900 ORTHO05D009822 3.9e-19 97.4 57 78.9
Lj7A558G40 Lonicera japonica HOM05D001900 ORTHO05D009822 1.1e-18 95.9 54 83.3
Cpa.g.sc33.201 Carica papaya HOM05D001900 ORTHO05D009822 2.5e-18 94.7 60 70.0
Oeu060679.1 Olea europaea HOM05D001900 ORTHO05D009822 4.3e-18 94.0 56 73.2
Migut.I00453 Erythranthe guttata HOM05D001900 ORTHO05D009822 1.6e-17 92.0 56 78.6
MBI04_g33885_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 2.1e-17 91.7 50 84.0
Solyc01g081080.3 Solanum lycopersicum HOM05D001900 ORTHO05D009822 3.6e-17 90.9 53 79.2
Sopen01g032700 Solanum pennellii HOM05D001900 ORTHO05D009822 3.6e-17 90.9 53 79.2
GSVIVG01026718001 Vitis vinifera HOM05D001900 ORTHO05D009822 3.6e-17 90.9 52 76.9
Dinv43982 Davidia involucrata HOM05D001900 ORTHO05D009822 8.1e-17 89.7 51 78.4
Aqoxy3G02315 Aquilegia oxysepala HOM05D001900 ORTHO05D009822 1.4e-16 89.0 52 76.9
Thecc.03G317800 Theobroma cacao HOM05D001900 ORTHO05D009822 1.4e-16 89.0 52 80.8
MBI04_g28367_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 2.3e-16 88.2 52 76.9
Actinidia05814 Actinidia chinensis HOM05D001900 ORTHO05D009822 3.1e-16 87.8 56 76.8
CAN.G700.25 Capsicum annuum HOM05D001900 ORTHO05D009822 5.2e-16 87.0 48 83.3
TAR629G0128 Trochodendron aralioides HOM05D001900 ORTHO05D009822 8.9e-16 86.3 51 76.5
Duzib068G0353 Durio zibethinus HOM05D001900 ORTHO05D009822 1.2e-15 85.9 51 76.5
Gohir.D01G189200 Gossypium hirsutum HOM05D001900 ORTHO05D009822 1.2e-15 85.9 51 80.4
Gorai.002G232800 Gossypium raimondii HOM05D001900 ORTHO05D009822 1.2e-15 85.9 51 80.4
ECA236G3998 Erigeron canadensis HOM05D001900 ORTHO05D009822 1.5e-15 85.5 56 71.4
TWI23G0622 Tripterygium wilfordii HOM05D001900 ORTHO05D009822 1.5e-15 85.5 51 76.5
DCAR_025009 Daucus carota HOM05D001900 ORTHO05D009822 2.0e-15 85.1 53 71.7
Lsat_1_v5_gn_7_10680 Lactuca sativa HOM05D001900 ORTHO05D009822 2.0e-15 85.1 53 73.6
Manes.09G009000 Manihot esculenta HOM05D001900 ORTHO05D009822 2.0e-15 85.1 51 78.4
FAN01G1173 Fragaria x ananassa HOM05D001900 ORTHO05D009822 2.6e-15 84.7 52 75.0
FAN03G2269 Fragaria x ananassa HOM05D001900 ORTHO05D009822 2.6e-15 84.7 52 75.0
FAN10G3152 Fragaria x ananassa HOM05D001900 ORTHO05D009822 2.6e-15 84.7 52 75.0
Prupe.2G108000 Prunus persica HOM05D001900 ORTHO05D009822 2.6e-15 84.7 57 73.7
RcHm_v2.0_Chr1g0341191 Rosa chinensis HOM05D001900 ORTHO05D009822 2.6e-15 84.7 52 76.9
CSS0049577 Camellia sinensis var. sinensis HOM05D001900 ORTHO05D009822 3.4e-15 84.3 51 78.4
Gohir.A01G199100 Gossypium hirsutum HOM05D001900 ORTHO05D009822 3.4e-15 84.3 51 78.4
PGR083G1425 Punica granatum HOM05D001900 ORTHO05D009822 3.4e-15 84.3 53 77.4
Atru.chr5.3 Acer truncatum HOM05D001900 ORTHO05D009822 4.4e-15 84.0 52 75.0
PSO478G4208 Papaver somniferum HOM05D001900 ORTHO05D009822 4.4e-15 84.0 56 64.3
Duzib093G0448 Durio zibethinus HOM05D001900 ORTHO05D009822 5.8e-15 83.6 51 78.4
DCAR_029556 Daucus carota HOM05D001900 ORTHO05D009822 7.5e-15 83.2 53 71.7
FAN06G3246 Fragaria x ananassa HOM05D001900 ORTHO05D009822 9.8e-15 82.8 52 73.1
CANSAT25G3499 Cannabis sativa HOM05D001900 ORTHO05D009822 1.3e-14 82.4 51 74.5
Sed0002012 Sechium edule HOM05D001900 ORTHO05D009822 1.3e-14 82.4 52 67.3
ATR0665G407 Amborella trichopoda HOM05D001900 ORTHO05D009822 2.9e-14 81.3 56 71.4
TWI59G1258 Tripterygium wilfordii HOM05D001900 ORTHO05D009822 3.7e-14 80.9 51 72.5
PSO478G4786 Papaver somniferum HOM05D001900 ORTHO05D009822 4.9e-14 80.5 50 68.0
MELO3C006229.2 Cucumis melo HOM05D001900 ORTHO05D009822 8.3e-14 79.7 52 65.4
HanXRQChr04g0123561 Helianthus annuus HOM05D001900 ORTHO05D009822 1.4e-13 79.0 53 69.8
Lj1g0008985 Lotus japonicus HOM05D001900 ORTHO05D009822 1.2e-12 75.9 53 64.2
TPR.G38535 Trifolium pratense HOM05D001900 ORTHO05D009822 1.2e-12 75.9 53 66.0
Oeu034874.1 Olea europaea HOM05D001900 ORTHO05D009822 2.1e-12 75.1 54 57.4
Oeu034875.1 Olea europaea HOM05D001900 ORTHO05D009822 2.1e-12 75.1 54 57.4
Hma1.2p1_0915F.1_g236310 Hydrangea macrophylla HOM05D001900 ORTHO05D009822 2.7e-12 74.7 73 52.1
Hma1.2p1_2755F.1_g327980 Hydrangea macrophylla HOM05D001900 ORTHO05D009822 2.7e-12 74.7 73 52.1
Os10g0574500 Oryza sativa ssp. japonica HOM05D001900 ORTHO05D009822 2.7e-12 74.7 50 66.0
Ciclev10024044m.g Citrus clementina HOM05D001900 ORTHO05D009822 4.6e-12 73.9 51 68.6
Medtr3g118160 Medicago truncatula HOM05D001900 ORTHO05D009822 2.3e-11 71.6 53 58.5
Zm00001eb024430 Zea mays HOM05D001900 ORTHO05D009822 2.3e-11 71.6 50 58.0
Phvul.009G118000 Phaseolus vulgaris HOM05D001900 ORTHO05D009822 3.9e-11 70.9 53 56.6
Psat5g001640 Pisum sativum HOM05D001900 ORTHO05D009822 6.6e-11 70.1 53 60.4
Glyma.06G002200 Glycine max HOM05D001900 ORTHO05D009822 8.6e-11 69.7 53 60.4
Ca_15288_v3 Cicer arietinum L. HOM05D001900 ORTHO05D009822 1.9e-10 68.6 54 57.4
VMungo1309G1285 Vigna mungo HOM05D001900 ORTHO05D009822 1.9e-10 68.6 53 56.6
ClCG05G002630 Citrullus lanatus HOM05D001900 ORTHO05D009822 5.6e-10 67.0 44 63.6
Potri.003G093400 Populus trichocarpa HOM05D001900 ORTHO05D009822 3.6e-09 64.3 51 52.9
Actinidia31751 Actinidia chinensis HOM05D001900 ORTHO05D009822 1.8e-08 62.0 53 62.3
Dinv43536 Davidia involucrata HOM05D001900 ORTHO05D009822 3.4e-07 57.8 29 86.2
Duzib068G0331 Durio zibethinus HOM05D001900 ORTHO05D009822 2.2e-06 55.1 50 48.0
Thecc.03G225300 Theobroma cacao HOM05D001900 ORTHO05D009822 2.9e-06 54.7 49 44.9
Haze_16320 Corylus avellana HOM05D001900 ORTHO05D009822 8.4e-06 53.1 30 76.7


User provided reference genes

Program Settings