Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 0.0e+00 1294.3 663 100.0
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 1.9e-239 832.8 657 68.2
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 1.5e-236 823.2 641 67.6
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 4.9e-224 781.6 649 65.3
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 8.7e-221 770.8 684 62.1
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 4.8e-219 765.0 646 64.2
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 5.8e-217 758.1 641 64.0
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 9.9e-217 757.3 649 64.4
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 1.1e-215 753.8 640 63.3
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 9.3e-215 750.7 642 63.6
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 7.9e-214 747.7 642 63.1
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 1.3e-213 746.9 654 62.1
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 2.3e-213 746.1 642 63.2
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 3.9e-213 745.3 642 62.6
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 3.9e-213 745.3 656 62.7
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 3.9e-213 745.3 628 64.2
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 5.1e-213 745.0 645 62.0
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 1.5e-212 743.4 644 63.4
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 1.5e-212 743.4 581 66.3
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 5.6e-212 741.5 641 62.6
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 2.8e-211 739.2 640 63.0
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 5.3e-210 734.9 645 61.1
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 7.6e-209 731.1 642 60.0
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 8.4e-208 727.6 643 60.7
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 1.1e-207 727.2 652 62.0
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 1.9e-207 726.5 642 59.7
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 1.3e-205 720.3 632 62.0
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 4.3e-204 715.3 660 59.4
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 7.4e-204 714.5 636 61.5
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 6.2e-203 711.4 655 59.5
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 2.4e-202 709.5 642 59.5
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 2.4e-202 709.5 647 60.1
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 3.1e-202 709.1 659 58.9
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 4.5e-201 705.3 646 59.3
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 1.7e-200 703.4 624 61.4
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 3.8e-200 702.2 658 59.1
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 1.4e-199 700.3 646 59.4
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 2.5e-199 699.5 661 59.8
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 2.5e-199 699.5 660 60.8
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 6.0e-198 694.9 640 61.9
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 5.1e-197 691.8 652 59.0
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 6.7e-197 691.4 642 60.9
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 4.3e-196 688.7 642 60.3
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 2.8e-195 686.0 657 56.5
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 3.7e-195 685.6 645 60.5
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 6.3e-195 684.9 643 59.6
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 1.1e-194 684.1 674 57.7
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 1.1e-194 684.1 634 58.7
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 1.1e-194 684.1 649 59.3
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 1.4e-194 683.7 532 63.7
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 2.0e-193 679.9 673 57.7
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 2.0e-193 679.9 642 60.1
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 3.4e-193 679.1 647 58.6
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 3.4e-193 679.1 648 58.8
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 5.9e-193 678.3 651 57.1
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 2.9e-192 676.0 643 58.0
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 3.8e-192 675.6 639 58.8
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 1.4e-191 673.7 648 57.7
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 1.4e-191 673.7 636 57.4
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 1.9e-191 673.3 641 59.0
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 7.2e-191 671.4 547 64.4
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 2.7e-190 669.5 656 57.8
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 8.7e-189 664.5 650 57.7
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 4.3e-188 662.1 653 55.4
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 4.3e-188 662.1 439 72.7
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 4.8e-187 658.7 643 58.2
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 4.8e-187 658.7 650 58.5
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 2.6e-185 652.9 647 59.0
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 2.6e-185 652.9 647 59.0
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 1.0e-184 651.0 644 57.6
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 4.2e-183 645.6 656 54.9
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 1.6e-182 643.7 641 53.7
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 1.4e-181 640.6 661 55.1
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 1.8e-181 640.2 654 54.6
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 1.8e-181 640.2 641 58.2
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 3.9e-181 639.0 533 61.7
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 4.4e-180 635.6 663 54.8
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 1.3e-179 634.0 651 55.0
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 6.9e-178 628.2 634 56.5
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.3e-176 624.0 640 55.2
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 1.7e-176 623.6 645 54.3
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 2.2e-176 623.2 632 54.9
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.8e-176 622.5 651 54.4
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 5.0e-176 622.1 650 53.8
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 8.5e-176 621.3 652 54.9
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 1.4e-175 620.5 640 55.2
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 9.4e-175 617.8 651 53.5
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 5.2e-173 612.1 643 54.0
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 6.7e-173 611.7 640 54.7
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 6.7e-173 611.7 640 54.7
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 2.0e-172 610.1 650 53.8
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 2.2e-171 606.7 646 53.3
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 2.2e-171 606.7 634 54.3
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 9.1e-170 601.3 644 52.6
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.2e-169 600.9 640 53.6
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 1.6e-169 600.5 642 52.0
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 7.0e-162 575.1 452 62.6
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 2.9e-152 543.1 395 66.1
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 1.8e-146 523.9 647 49.5
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 1.2e-137 494.6 354 68.1
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 1.2e-129 468.0 521 48.6
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 2.7e-129 466.8 359 63.8
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 8.1e-118 428.7 490 46.1
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 7.6e-116 422.2 483 46.4
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 5.4e-114 416.0 594 40.6
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 2.4e-109 400.6 593 41.1
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 3.5e-105 386.7 481 42.8
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 1.1e-82 312.0 665 31.4
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 6.5e-75 286.2 520 33.7
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 2.3e-56 224.6 467 30.6
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 1.8e-53 214.9 418 34.0
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 2.1e-49 201.4 486 28.0
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 7.8e-28 129.8 98 62.2
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 7.8e-28 129.8 98 62.2
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 4.3e-26 124.0 98 60.2
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 3.9e-19 100.9 439 22.3


User provided reference genes

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