Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 2.5e-167 592.0 302 100.0
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 1.3e-107 393.7 302 68.5
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 1.6e-105 386.7 303 69.6
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 1.8e-104 383.3 302 68.2
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 2.3e-104 382.9 305 67.5
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 3.0e-104 382.5 302 67.9
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 4.0e-104 382.1 306 68.3
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 5.2e-104 381.7 305 67.5
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 8.8e-104 380.9 305 66.9
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 1.1e-103 380.6 305 68.5
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 1.5e-103 380.2 303 69.0
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 2.6e-103 379.4 301 67.1
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 1.7e-102 376.7 243 77.8
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 4.8e-102 375.2 303 67.0
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 8.2e-102 374.4 304 67.1
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 2.4e-101 372.9 297 66.7
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 4.1e-101 372.1 303 67.0
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 9.1e-101 370.9 303 66.7
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 1.6e-100 370.2 302 65.9
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 2.6e-100 369.4 302 67.5
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 2.6e-100 369.4 304 67.4
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 5.9e-100 368.2 303 66.3
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 5.9e-100 368.2 302 63.9
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 1.7e-99 366.7 302 65.6
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 2.2e-99 366.3 302 66.6
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.2e-99 366.3 302 65.9
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 2.2e-99 366.3 304 66.8
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 2.9e-99 365.9 317 63.7
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 6.5e-99 364.8 302 66.2
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 8.5e-99 364.4 302 66.9
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 8.5e-99 364.4 302 66.2
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 1.1e-98 364.0 306 64.1
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 4.2e-98 362.1 307 66.1
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 1.2e-97 360.5 302 66.9
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 1.6e-97 360.1 302 64.2
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 2.7e-97 359.4 304 64.8
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 2.7e-97 359.4 304 64.1
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 2.7e-97 359.4 306 63.4
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 3.6e-97 359.0 302 65.9
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 3.6e-97 359.0 302 63.6
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 4.7e-97 358.6 307 64.5
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 8.0e-97 357.8 303 64.0
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 1.0e-96 357.5 303 63.4
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 1.4e-96 357.1 306 64.1
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 3.0e-96 355.9 302 64.2
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 3.0e-96 355.9 302 64.6
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 3.0e-96 355.9 304 64.8
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 4.0e-96 355.5 302 64.2
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 4.0e-96 355.5 202 83.2
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 5.2e-96 355.1 287 68.6
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 8.8e-96 354.4 202 83.2
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 1.5e-95 353.6 303 65.7
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 1.5e-95 353.6 302 63.9
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 2.0e-95 353.2 285 66.3
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 2.6e-95 352.8 310 62.9
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 4.4e-95 352.1 302 62.3
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 4.4e-95 352.1 306 62.1
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 1.7e-94 350.1 302 61.9
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 2.2e-94 349.7 304 62.2
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 1.1e-93 347.4 302 62.9
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 1.1e-93 347.4 306 62.7
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.8e-93 346.7 259 69.1
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 1.8e-93 346.7 310 61.9
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 2.4e-93 346.3 244 71.7
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 2.4e-93 346.3 331 61.0
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 4.1e-93 345.5 236 73.7
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 9.1e-93 344.4 248 71.8
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 9.1e-93 344.4 248 71.8
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 9.1e-93 344.4 248 71.8
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 9.1e-93 344.4 248 71.8
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 1.6e-92 343.6 213 79.8
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 4.5e-92 342.0 283 65.7
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 5.9e-92 341.7 207 80.2
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 5.9e-92 341.7 312 61.2
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 7.7e-92 341.3 302 60.6
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 1.0e-91 340.9 248 71.0
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.0e-91 340.9 276 65.6
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 1.0e-91 340.9 313 59.7
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 1.3e-91 340.5 203 82.3
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 3.8e-91 339.0 303 60.7
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 6.5e-91 338.2 304 60.5
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 6.5e-91 338.2 237 71.7
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 1.9e-90 336.7 248 70.2
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 9.4e-90 334.3 248 69.4
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 1.2e-89 334.0 304 61.5
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 2.7e-89 332.8 304 62.5
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 8.0e-89 331.3 202 78.7
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 1.0e-88 330.9 302 59.9
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 1.2e-87 327.4 200 80.0
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 1.6e-84 317.0 178 87.1
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 1.7e-83 313.5 267 64.8
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 6.6e-83 311.6 204 74.5
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 8.6e-83 311.2 303 57.8
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 4.2e-82 308.9 301 58.5
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 1.2e-81 307.4 205 73.7
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 1.2e-79 300.8 194 75.8
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 5.7e-79 298.5 214 70.6
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 3.7e-78 295.8 213 70.0
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 2.4e-77 293.1 271 62.7
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 4.6e-76 288.9 270 57.0
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 1.3e-75 287.3 248 63.3
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 2.3e-75 286.6 200 72.0
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.0e-72 277.7 304 55.9
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 2.2e-70 270.0 199 68.3
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 2.7e-68 263.1 157 80.9
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 4.6e-68 262.3 247 57.1
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.3e-67 260.8 305 52.1
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 1.5e-66 257.3 247 56.7
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 7.3e-66 255.0 211 62.6
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 4.7e-65 252.3 155 81.9
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 4.0e-64 249.2 250 57.6
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 1.6e-60 237.3 225 57.8
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 7.8e-60 235.0 208 59.6
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 8.4e-54 214.9 273 46.2
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 1.0e-51 208.0 201 52.7
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 7.3e-50 201.8 116 82.8
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 5.4e-45 185.7 201 57.7
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 1.6e-44 184.1 114 77.2
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 4.4e-39 166.0 231 45.9
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 2.1e-25 120.6 116 56.0
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 3.8e-22 109.8 69 69.6
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 9.7e-10 68.6 63 58.7
GSVIVG01001070001 Vitis vinifera HOM05D006631 ORTHO05D008359 5.9e-07 59.3 34 79.4
Prupe.6G248300 Prunus persica HOM05D006631 ORTHO05D334351 5.0e-06 56.2 44 65.9


User provided reference genes

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