Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A592T71 Lonicera japonica HOM05D008545 ORTHO05D010341 8.4e-134 480.3 238 100.0
Dinv43892 Davidia involucrata HOM05D008545 ORTHO05D010341 5.2e-51 205.3 224 51.3
TAR629G2366 Trochodendron aralioides HOM05D008545 ORTHO05D010341 1.1e-43 181.0 245 44.1
GSVIVG01027047001 Vitis vinifera HOM05D008545 ORTHO05D010341 8.9e-43 177.9 236 46.2
Duzib138G0500 Durio zibethinus HOM05D008545 ORTHO05D010341 1.2e-42 177.6 243 43.6
Thecc.01G347700 Theobroma cacao HOM05D008545 ORTHO05D010341 1.1e-40 171.0 239 41.0
Atru.chr5.619 Acer truncatum HOM05D008545 ORTHO05D010341 3.5e-39 166.0 237 42.6
Potri.002G167500 Populus trichocarpa HOM05D008545 ORTHO05D010341 2.3e-38 163.3 247 43.7
Lj7A504G55 Lonicera japonica HOM05D008545 ORTHO05D010341 8.6e-38 161.4 199 45.7
Nitab4.5_0002262g0100 Nicotiana tabacum HOM05D008545 ORTHO05D010341 3.3e-37 159.5 201 45.3
Potri.014G094600 Populus trichocarpa HOM05D008545 ORTHO05D010341 2.4e-35 153.3 246 41.1
Manes.01G249300 Manihot esculenta HOM05D008545 ORTHO05D010341 8.9e-35 151.4 237 42.6
Gohir.A07G139700 Gossypium hirsutum HOM05D008545 ORTHO05D010341 2.6e-34 149.8 243 38.7
Gohir.D07G144800 Gossypium hirsutum HOM05D008545 ORTHO05D010341 5.8e-34 148.7 243 38.3
Gorai.001G156800 Gossypium raimondii HOM05D008545 ORTHO05D010341 5.8e-34 148.7 243 38.3
Peaxi162Scf00403g00718 Petunia axillaris HOM05D008545 ORTHO05D010341 5.8e-34 148.7 206 41.3
PGR031G2054 Punica granatum HOM05D008545 ORTHO05D010341 1.3e-30 137.5 250 38.0
Eucgr.D02345 Eucalyptus grandis HOM05D008545 ORTHO05D010341 8.7e-30 134.8 247 37.2
MD07G1144400 Malus domestica HOM05D008545 ORTHO05D010341 8.7e-30 134.8 215 39.5
CSS0024380 Camellia sinensis var. sinensis HOM05D008545 ORTHO05D010341 4.3e-29 132.5 240 36.2
DCAR_016077 Daucus carota HOM05D009167 ORTHO05D010341 4.3e-29 132.5 239 35.6
PGSC0003DMG400033878 Solanum tuberosum HOM05D008545 ORTHO05D010341 2.1e-28 130.2 240 37.9
Prupe.2G183300 Prunus persica HOM05D008545 ORTHO05D010341 2.4e-27 126.7 237 38.8
CAN.G310.5 Capsicum annuum HOM05D008545 ORTHO05D010341 1.5e-26 124.0 242 35.1
Solyc05g050240.3 Solanum lycopersicum HOM05D008545 ORTHO05D010341 7.6e-26 121.7 240 35.4
MSTRG.17319 Avicennia marina HOM05D008545 ORTHO05D010341 1.4e-24 117.5 236 36.9
FvH4_7g15870 Fragaria vesca HOM05D008545 ORTHO05D010341 3.2e-24 116.3 227 36.1
FAN06G5050 Fragaria x ananassa HOM05D008545 ORTHO05D010341 4.2e-24 115.9 227 35.7
Sabra14G0069200 Salix brachista HOM05D008545 ORTHO05D010341 7.1e-24 115.2 163 42.3
Actinidia20194 Actinidia chinensis HOM05D008545 ORTHO05D010341 6.0e-23 112.1 249 34.9
FAN01G1302 Fragaria x ananassa HOM05D008545 ORTHO05D010341 6.0e-23 112.1 227 35.2
CANSAT56G3993 Cannabis sativa HOM05D008545 ORTHO05D010341 1.7e-22 110.5 244 35.2
Nitab4.5_0003779g0040 Nicotiana tabacum HOM05D008545 ORTHO05D010341 1.7e-22 110.5 197 38.1
FAN03G1297 Fragaria x ananassa HOM05D008545 ORTHO05D010341 3.9e-22 109.4 227 34.8
FAN10G0919 Fragaria x ananassa HOM05D008545 ORTHO05D010341 3.9e-22 109.4 227 35.7
FAN10G3148 Fragaria x ananassa HOM05D008545 ORTHO05D010341 6.6e-22 108.6 227 35.7
RcHm_v2.0_Chr1g0358691 Rosa chinensis HOM05D008545 ORTHO05D010341 1.3e-20 104.4 227 36.1
SGA_v2.0_scaffold5G02985 Striga asiatica HOM05D008545 ORTHO05D010341 6.2e-20 102.1 236 33.5
Sopen05g028690 Solanum pennellii HOM05D008545 ORTHO05D010341 5.3e-19 99.0 191 35.6
MBI06_g22406_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D010341 9.0e-19 98.2 260 31.5
Hma1.2p1_0384F.1_g141050 Hydrangea macrophylla HOM05D008545 ORTHO05D010341 3.2e-16 89.7 102 49.0
DCAR_008649 Daucus carota HOM05D008545 ORTHO05D010341 3.0e-14 83.2 167 34.7
FAN06G3211 Fragaria x ananassa HOM05D008545 ORTHO05D010341 1.5e-13 80.9 172 32.6
COL.COLO4_06334 Corchorus olitorius HOM05D002314 ORTHO05D002538 7.4e-13 78.6 76 55.3
Nn1g01793 Nelumbo nucifera HOM05D008545 ORTHO05D010341 7.4e-13 78.6 167 31.7
Oeu007845.1 Olea europaea HOM05D008545 ORTHO05D010341 2.1e-12 77.0 240 30.4
MD01G1075500 Malus domestica HOM05D008545 ORTHO05D010341 3.7e-12 76.3 92 45.7
SalBow3G1564 Salvia bowleyana HOM05D008545 ORTHO05D010341 9.0e-11 71.6 235 28.5
Migut.B01833 Erythranthe guttata HOM05D008545 ORTHO05D010341 5.8e-10 68.9 114 33.3
Actinidia10102 Actinidia chinensis HOM05D008545 ORTHO05D010341 1.2e-07 61.2 112 37.5
SGA_v2.0_scaffold548G52844 Striga asiatica HOM05D046447 ORTHO05D010341 1.3e-06 57.8 70 42.9
CANSAT56G3625 Cannabis sativa HOM05D008545 ORTHO05D010341 1.8e-06 57.4 77 41.6


User provided reference genes

Program Settings