Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A576T36 Lonicera japonica HOM05D006557 ORTHO05D008177 4.0e-295 1017.3 501 100.0
Dinv32417 Davidia involucrata HOM05D006557 ORTHO05D008177 3.0e-210 735.3 509 74.9
CSS0001854 Camellia sinensis var. sinensis HOM05D006557 ORTHO05D008177 1.9e-199 699.5 504 71.4
Cfa004174 Carpinus fangiana HOM05D006557 ORTHO05D008177 7.3e-196 687.6 504 69.8
Prupe.2G153600 Prunus persica HOM05D006557 ORTHO05D008177 1.6e-195 686.4 500 70.8
Actinidia33449 Actinidia chinensis HOM05D006557 ORTHO05D008177 2.1e-195 686.0 503 69.4
TAR375G0852 Trochodendron aralioides HOM05D006557 ORTHO05D008177 3.7e-192 675.2 505 69.7
QL08p050821 Quercus lobata HOM05D006557 ORTHO05D008177 1.9e-191 672.9 500 69.6
CiPaw.01G052200 Carya illinoinensis HOM05D006557 ORTHO05D008177 6.0e-190 667.9 497 69.6
Manes.01G262900 Manihot esculenta HOM05D006557 ORTHO05D008177 7.8e-190 667.5 502 68.1
CANSAT56G3931 Cannabis sativa HOM05D006557 ORTHO05D008177 2.3e-189 666.0 500 67.8
DCAR_008582 Daucus carota HOM05D006557 ORTHO05D008177 1.1e-188 663.7 502 67.1
RcHm_v2.0_Chr1g0352061 Rosa chinensis HOM05D006557 ORTHO05D008177 1.4e-186 656.8 495 67.9
GSVIVG01026363001 Vitis vinifera HOM05D006557 ORTHO05D008177 2.4e-186 656.0 505 67.9
Atru.chr5.390 Acer truncatum HOM05D006557 ORTHO05D008177 5.2e-186 654.8 505 67.1
Ciclev10019481m.g Citrus clementina HOM05D006557 ORTHO05D008177 5.2e-186 654.8 507 67.5
COL.COLO4_12633 Corchorus olitorius HOM05D006557 ORTHO05D008177 8.9e-186 654.1 504 66.3
Atru.chr5.396 Acer truncatum HOM05D006557 ORTHO05D008177 1.2e-185 653.7 505 67.1
Lsat_1_v5_gn_7_8181 Lactuca sativa HOM05D006557 ORTHO05D008177 2.2e-184 649.4 500 66.0
Thecc.01G369600 Theobroma cacao HOM05D006557 ORTHO05D008177 6.4e-184 647.9 509 65.4
Oeu058605.1 Olea europaea HOM05D006557 ORTHO05D008177 1.1e-183 647.1 498 65.5
Gorai.001G172000 Gossypium raimondii HOM05D006557 ORTHO05D008177 2.4e-183 646.0 501 65.1
FvH4_7g12930 Fragaria vesca HOM05D006557 ORTHO05D008177 3.2e-183 645.6 498 66.9
Gohir.D07G150201 Gossypium hirsutum HOM05D006557 ORTHO05D008177 5.4e-183 644.8 501 64.9
FAN10G0459 Fragaria x ananassa HOM05D006557 ORTHO05D008177 7.1e-183 644.4 498 66.7
Nn6g34278 Nelumbo nucifera HOM05D006557 ORTHO05D008177 1.2e-182 643.7 510 65.9
Peaxi162Scf00021g00314 Petunia axillaris HOM05D006557 ORTHO05D008177 1.6e-182 643.3 502 65.9
Potri.014G077700 Populus trichocarpa HOM05D006557 ORTHO05D008177 7.8e-182 641.0 498 66.5
FAN01G0615 Fragaria x ananassa HOM05D006557 ORTHO05D008177 1.0e-181 640.6 498 65.9
PGSC0003DMG400000131 Solanum tuberosum HOM05D006557 ORTHO05D008177 2.3e-181 639.4 503 66.0
Gohir.A07G144300 Gossypium hirsutum HOM05D006557 ORTHO05D008177 3.9e-181 638.6 503 64.4
MBI04_g40842_MAGBIO Magnolia biondii HOM05D006557 ORTHO05D008177 5.1e-181 638.3 500 65.8
FAN06G2259 Fragaria x ananassa HOM05D006557 ORTHO05D008177 8.7e-181 637.5 506 65.6
Hund27329 Selenicereus undatus HOM05D006557 ORTHO05D008177 8.7e-181 637.5 519 62.2
Solyc01g091860.4 Solanum lycopersicum HOM05D006557 ORTHO05D008177 1.5e-180 636.7 505 65.5
Sopen01g037630 Solanum pennellii HOM05D006557 ORTHO05D008177 5.6e-180 634.8 507 64.7
Cc02_g37160 Coffea canephora HOM05D006557 ORTHO05D008177 3.6e-179 632.1 500 65.2
FAN10G2465 Fragaria x ananassa HOM05D006557 ORTHO05D008177 3.6e-179 632.1 498 65.7
Aqoxy7G00469 Aquilegia oxysepala HOM05D006557 ORTHO05D008177 8.1e-179 630.9 504 65.1
Nitab4.5_0009025g0010 Nicotiana tabacum HOM05D006557 ORTHO05D008177 2.4e-178 629.4 517 63.8
MSTRG.17229 Avicennia marina HOM05D006557 ORTHO05D008177 1.2e-177 627.1 498 66.3
TWI23G0976 Tripterygium wilfordii HOM05D006557 ORTHO05D008177 1.2e-177 627.1 503 65.2
arahy.Tifrunner.gnm1.ann1.P0RXA9 Arachis hypogaea HOM05D006557 ORTHO05D008177 2.0e-177 626.3 500 65.0
Nitab4.5_0006706g0040 Nicotiana tabacum HOM05D006557 ORTHO05D008177 2.6e-177 625.9 544 61.0
PGR042G0062 Punica granatum HOM05D006557 ORTHO05D008177 4.4e-177 625.2 505 63.8
CARHR000440 Cardamine hirsuta HOM05D006557 ORTHO05D008177 5.8e-177 624.8 496 63.9
Thhalv10007294m.g Eutrema salsugineum HOM05D006557 ORTHO05D008177 2.2e-176 622.9 501 63.5
FAN03G1058 Fragaria x ananassa HOM05D006557 ORTHO05D008177 3.8e-176 622.1 559 60.1
Sp1g00380 Schrenkiella parvula HOM05D006557 ORTHO05D008177 6.4e-176 621.3 496 64.3
HanXRQChr04g0121771 Helianthus annuus HOM05D006557 ORTHO05D008177 1.1e-175 620.5 500 63.2
Lj1g0000530 Lotus japonicus HOM05D006557 ORTHO05D008177 1.1e-175 620.5 500 64.6
Sc02g0002240 Simmondsia chinensis HOM05D006557 ORTHO05D008177 1.9e-175 619.8 505 62.4
Medtr7g076590 Medicago truncatula HOM05D006557 ORTHO05D008177 3.2e-175 619.0 500 64.0
Phvul.008G069900 Phaseolus vulgaris HOM05D006557 ORTHO05D008177 3.2e-175 619.0 504 62.9
Lalb_Chr01g0021061 Lupinus albus HOM05D006557 ORTHO05D008177 4.2e-175 618.6 507 62.9
Glyma.09G263800 Glycine max HOM05D006557 ORTHO05D008177 5.4e-175 618.2 500 62.6
Glyma.18G228300 Glycine max HOM05D006557 ORTHO05D008177 3.5e-174 615.5 500 63.2
Migut.B01677 Erythranthe guttata HOM05D006557 ORTHO05D008177 4.6e-174 615.1 496 63.5
Carub.0001s0032 Capsella rubella HOM05D006557 ORTHO05D008177 2.3e-173 612.8 498 63.5
ECA236G4623 Erigeron canadensis HOM05D006557 ORTHO05D008177 5.1e-173 611.7 500 63.2
MELO3C024600.2 Cucumis melo HOM05D006557 ORTHO05D008177 6.6e-173 611.3 520 62.3
Aa31LG1G11240 Aethionema arabicum HOM05D006557 ORTHO05D008177 2.8e-171 605.9 540 60.6
Sed0001202 Sechium edule HOM05D006557 ORTHO05D008177 1.1e-170 604.0 503 62.8
Rhsim01G0154800 Rhododendron simsii HOM05D006557 ORTHO05D008177 1.8e-170 603.2 541 61.0
TPR.G37774 Trifolium pratense HOM05D006557 ORTHO05D008177 5.3e-170 601.7 500 63.0
EL10Ac1g00969 Beta vulgaris HOM05D006557 ORTHO05D008177 2.0e-169 599.7 500 61.2
Duzib133G0555 Durio zibethinus HOM05D006557 ORTHO05D008177 3.4e-169 599.0 504 61.3
Eucgr.E00220 Eucalyptus grandis HOM05D006557 ORTHO05D008177 3.4e-169 599.0 501 61.5
AL1G10410 Arabidopsis lyrata HOM05D006557 ORTHO05D008177 4.5e-169 598.6 496 63.3
CsaV3_6G041250 Cucumis sativus L. HOM05D006557 ORTHO05D008177 3.8e-168 595.5 508 62.2
ClCG01G015140 Citrullus lanatus HOM05D006557 ORTHO05D008177 1.1e-167 594.0 532 59.6
AUR62033372 Chenopodium quinoa HOM05D006557 ORTHO05D008177 5.4e-167 591.7 505 60.2
vmacro04846 Vaccinium macrocarpon HOM05D006557 ORTHO05D008177 5.4e-167 591.7 463 66.5
PSO478G0993 Papaver somniferum HOM05D006557 ORTHO05D008177 1.3e-165 587.0 498 60.4
BolC8t52906H Brassica oleracea HOM05D006557 ORTHO05D008177 4.0e-162 575.5 503 60.4
C08p53930 Brassica napus HOM05D006557 ORTHO05D008177 9.0e-162 574.3 503 60.2
SalBow3G2355 Salvia bowleyana HOM05D006557 ORTHO05D008177 9.3e-159 564.3 496 59.5
AT1G01920 Arabidopsis thaliana HOM05D006557 ORTHO05D008177 2.1e-158 563.1 458 64.0
BraA09t42268Z Brassica rapa HOM05D006557 ORTHO05D008177 1.3e-157 560.5 528 58.0
Psat3g112120 Pisum sativum HOM05D006557 ORTHO05D008177 3.1e-154 549.3 449 62.8
arahy.Tifrunner.gnm1.ann1.1L2ERA Arachis hypogaea HOM05D006557 ORTHO05D008177 5.3e-154 548.5 481 60.5
ATR0757G115 Amborella trichopoda HOM05D006557 ORTHO05D008177 4.2e-151 538.9 505 56.0
Dinv43750 Davidia involucrata HOM05D006557 ORTHO05D008177 2.7e-150 536.2 376 73.9
AUR62004285 Chenopodium quinoa HOM05D006557 ORTHO05D008177 3.3e-148 529.3 497 56.5
HPP92_025368 Vanilla planifolia HOM05D006557 ORTHO05D008177 6.3e-147 525.0 502 54.8
Os06g0127200 Oryza sativa ssp. japonica HOM05D006557 ORTHO05D008177 1.4e-138 497.3 502 51.2
CAN.G170.58 Capsicum annuum HOM05D006557 ORTHO05D008177 2.0e-137 493.4 410 63.7
Zm00001eb269430 Zea mays HOM05D006557 ORTHO05D008177 1.5e-132 477.2 498 50.6
MD02G1195100 Malus domestica HOM05D006557 ORTHO05D008177 1.2e-126 457.6 366 65.8
FAN06G3640 Fragaria x ananassa HOM05D006557 ORTHO05D008177 5.9e-121 438.7 615 44.7
Haze_15235 Corylus avellana HOM05D006557 ORTHO05D008177 1.3e-120 437.6 341 66.0
unitig_8.g3814 Utricularia gibba HOM05D006557 ORTHO05D008177 8.5e-120 434.9 487 53.6
VMungo1383G0754 Vigna mungo HOM05D006557 ORTHO05D008177 7.5e-108 395.2 328 63.4
CDE11G1252 Ceratophyllum demersum HOM05D006557 ORTHO05D008177 6.1e-102 375.6 341 56.9
AagrBONN_evm.TU.Sc2ySwM_228.962 Anthoceros agrestis HOM05D006557 ORTHO05D008177 1.3e-99 367.9 550 40.0
Pp3c20_15200 Physcomitrium patens HOM05D006557 ORTHO05D008177 6.3e-99 365.5 560 39.6
Mapoly0052s0068 Marchantia polymorpha HOM05D006557 ORTHO05D008177 4.0e-93 346.3 558 40.5
SMO165G0089 Selaginella moellendorffii HOM05D006557 ORTHO05D008177 6.2e-86 322.4 511 39.1
Hma1.2p1_0033F.1_g020720 Hydrangea macrophylla HOM05D006557 ORTHO05D008177 1.4e-74 284.6 186 75.3
unitig_31.g34034 Utricularia gibba HOM05D006557 ORTHO05D008177 1.3e-67 261.5 398 45.7
Haze_15236 Corylus avellana HOM05D006557 ORTHO05D008177 2.4e-61 240.7 139 82.7
Sabra14G0054700 Salix brachista HOM05D006557 ORTHO05D008177 9.3e-58 228.8 199 57.3
SGA_v2.0_scaffold95G28878 Striga asiatica HOM05D006557 ORTHO05D008177 1.7e-56 224.6 186 62.4
CSS0034846 Camellia sinensis var. sinensis HOM05D006557 ORTHO05D008177 4.6e-49 199.9 223 51.6
HPP92_025494 Vanilla planifolia HOM05D006557 ORTHO05D008177 4.0e-45 186.8 174 52.9
VMungo1383G3400 Vigna mungo HOM05D006557 ORTHO05D008177 1.3e-38 165.2 136 61.8
CBR_g54105 Chara braunii HOM05D006557 ORTHO05D008177 1.7e-35 154.8 503 25.8
CDE11G0468 Ceratophyllum demersum HOM05D006557 ORTHO05D008177 5.0e-27 126.7 100 60.0
Cre07.g321200 Chlamydomonas reinhardtii HOM05D006557 ORTHO05D008177 4.3e-23 113.6 327 29.4
MD02G1195000 Malus domestica HOM05D006557 ORTHO05D008177 7.7e-20 102.8 69 71.0
Glyma.15G277300 Glycine max HOM05D006557 ORTHO05D008177 1.2e-17 95.5 78 56.4
MCO11G922 Micromonas commoda HOM05D006557 ORTHO05D008177 4.8e-14 83.6 333 26.1
SEGI_29223 Sequoiadendron giganteum HOM05D006557 ORTHO05D008177 1.4e-13 82.0 120 40.8
CAN.G170.57 Capsicum annuum HOM05D006557 ORTHO05D008177 1.3e-11 75.5 55 65.5
PGR119G0095 Punica granatum HOM05D005456 ORTHO05D006805 4.7e-09 67.0 143 30.8
Ciclev10031325m.g Citrus clementina HOM05D005456 ORTHO05D006805 6.7e-08 63.2 149 28.2
Manes.01G033300 Manihot esculenta HOM05D005456 ORTHO05D006805 1.1e-07 62.4 140 29.3
Pp3c3_17260 Physcomitrium patens HOM05D005456 ORTHO05D006805 1.1e-07 62.4 155 28.4
Cpa.g.sc991.1 Carica papaya HOM05D005456 ORTHO05D006805 2.0e-07 61.6 139 28.8
Eucgr.G02479 Eucalyptus grandis HOM05D005456 ORTHO05D006805 2.0e-07 61.6 158 25.3
Mapoly0036s0143 Marchantia polymorpha HOM05D006557 ORTHO05D048806 3.3e-07 60.8 192 26.6
Potri.008G090500 Populus trichocarpa HOM05D005456 ORTHO05D006805 3.3e-07 60.8 134 29.1
MCO01G414 Micromonas commoda HOM05D004224 ORTHO05D048806 4.4e-07 60.5 195 29.7
Medtr4g082305 Medicago truncatula HOM05D005456 ORTHO05D006805 7.4e-07 59.7 132 30.3
Phvul.002G169400 Phaseolus vulgaris HOM05D005456 ORTHO05D006805 9.7e-07 59.3 151 27.2
Sabra08G0067900 Salix brachista HOM05D005456 ORTHO05D006805 9.7e-07 59.3 142 29.6
CBR_g780 Chara braunii HOM05D005456 ORTHO05D006805 2.2e-06 58.2 135 31.1
Lj4g0024233 Lotus japonicus HOM05D005456 ORTHO05D006805 2.2e-06 58.2 132 31.1
VMungo0251G2245 Vigna mungo HOM05D005456 ORTHO05D006805 2.2e-06 58.2 132 31.1
CiPaw.05G130300 Carya illinoinensis HOM05D005456 ORTHO05D006805 2.8e-06 57.8 149 26.8
Oeu021071.2 Olea europaea HOM05D005456 ORTHO05D006805 2.8e-06 57.8 141 27.0
SEGI_15167 Sequoiadendron giganteum HOM05D006557 ORTHO05D008177 3.7e-06 57.4 40 60.0
ClCG09G021880 Citrullus lanatus HOM05D005456 ORTHO05D006805 4.8e-06 57.0 157 27.4
Glyma.20G031600 Glycine max HOM05D005456 ORTHO05D006805 4.8e-06 57.0 151 27.2
vmacro16348 Vaccinium macrocarpon HOM05D005456 ORTHO05D006805 4.8e-06 57.0 174 26.4
MELO3C008524.2 Cucumis melo HOM05D005456 ORTHO05D006805 8.2e-06 56.2 134 27.6


User provided reference genes

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