Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A557T37 Lonicera japonica HOM05D004530 ORTHO05D005839 5.1e-70 267.7 141 100.0
Migut.B01535 Erythranthe guttata HOM05D004530 ORTHO05D005839 1.2e-18 97.1 138 44.2
Actinidia12143 Actinidia chinensis HOM05D004530 ORTHO05D005839 1.5e-18 96.7 143 43.4
Dinv44062 Davidia involucrata HOM05D004530 ORTHO05D005839 2.6e-18 95.9 146 45.9
Hma1.2p1_0041F.1_g025360 Hydrangea macrophylla HOM05D004530 ORTHO05D005839 1.4e-16 90.1 146 39.0
Hma1.2p1_0041F.1_g025350 Hydrangea macrophylla HOM05D004530 ORTHO05D005839 2.7e-15 85.9 143 38.5
Lsat_1_v5_gn_3_126420 Lactuca sativa HOM05D004530 ORTHO05D005839 3.0e-14 82.4 133 40.6
Peaxi162Scf00475g00418 Petunia axillaris HOM05D004530 ORTHO05D005839 3.9e-14 82.0 124 43.5
RcHm_v2.0_Chr1g0347921 Rosa chinensis HOM05D004530 ORTHO05D005839 5.2e-14 81.6 143 37.1
arahy.Tifrunner.gnm1.ann1.BH8PB4 Arachis hypogaea HOM05D004530 ORTHO05D005839 6.7e-14 81.3 141 36.9
Ca_25804_v3 Cicer arietinum L. HOM05D004530 ORTHO05D005839 6.7e-14 81.3 137 38.7
ECA240G1126 Erigeron canadensis HOM05D004530 ORTHO05D005839 6.7e-14 81.3 137 40.9
FAN10G1666 Fragaria x ananassa HOM05D004530 ORTHO05D005839 2.0e-13 79.7 143 39.2
FAN03G1354 Fragaria x ananassa HOM05D004530 ORTHO05D005839 2.6e-13 79.3 138 37.0
FAN10G4098 Fragaria x ananassa HOM05D004530 ORTHO05D005839 2.6e-13 79.3 143 39.2
Medtr8g006895 Medicago truncatula HOM05D004530 ORTHO05D005839 2.6e-13 79.3 140 36.4
arahy.Tifrunner.gnm1.ann1.WR8IC8 Arachis hypogaea HOM05D004530 ORTHO05D005839 3.3e-13 79.0 141 36.2
GSVIVG01018280001 Vitis vinifera HOM05D004530 ORTHO05D005839 3.3e-13 79.0 133 36.8
Cc00_g35630 Coffea canephora HOM05D004530 ORTHO05D005839 5.7e-13 78.2 143 38.5
Potri.014G047600 Populus trichocarpa HOM05D004530 ORTHO05D005839 5.7e-13 78.2 140 37.1
FAN06G2217 Fragaria x ananassa HOM05D004530 ORTHO05D005839 7.4e-13 77.8 144 39.6
FAN06G5079 Fragaria x ananassa HOM05D004530 ORTHO05D005839 7.4e-13 77.8 144 39.6
HanXRQChr03g0093061 Helianthus annuus HOM05D004530 ORTHO05D005839 2.8e-12 75.9 135 37.0
FvH4_7g10200 Fragaria vesca HOM05D004530 ORTHO05D005839 4.8e-12 75.1 144 38.9
TWI14G0541 Tripterygium wilfordii HOM05D004530 ORTHO05D005839 4.8e-12 75.1 138 35.5
MSTRG.20690 Avicennia marina HOM05D004530 ORTHO05D005839 6.3e-12 74.7 143 35.7
Lj7A546T15 Lonicera japonica HOM05D004530 ORTHO05D005839 8.2e-12 74.3 100 50.0
TPR.G33134 Trifolium pratense HOM05D004530 ORTHO05D005839 8.2e-12 74.3 141 35.5
vmacro13497 Vaccinium macrocarpon HOM05D004530 ORTHO05D005839 8.2e-12 74.3 141 36.9
FAN01G0552 Fragaria x ananassa HOM05D004530 ORTHO05D005839 1.8e-11 73.2 142 35.9
Manes.01G274600 Manihot esculenta HOM05D004530 ORTHO05D005839 2.4e-11 72.8 146 35.6
CAN.G1473.6 Capsicum annuum HOM05D004530 ORTHO05D005839 3.1e-11 72.4 118 41.5
Cc02_g25120 Coffea canephora HOM05D004530 ORTHO05D005839 3.1e-11 72.4 139 38.1
Glyma.10G120400 Glycine max HOM05D004530 ORTHO05D005839 3.1e-11 72.4 133 33.8
SalBow5G0820 Salvia bowleyana HOM05D004530 ORTHO05D005839 7.0e-11 71.2 135 34.8
Eucgr.E01549 Eucalyptus grandis HOM05D004530 ORTHO05D005839 9.1e-11 70.9 144 36.8
Glyma.20G070800 Glycine max HOM05D004530 ORTHO05D005839 9.1e-11 70.9 133 33.8
Lalb_Chr07g0195421 Lupinus albus HOM05D004530 ORTHO05D005839 1.2e-10 70.5 138 37.0
Haze_02848 Corylus avellana HOM05D004530 ORTHO05D005839 2.0e-10 69.7 143 37.8
Psat4g224840 Pisum sativum HOM05D004530 ORTHO05D005839 2.0e-10 69.7 140 35.0
CSS0020970 Camellia sinensis var. sinensis HOM05D004530 ORTHO05D005839 4.5e-10 68.6 128 34.4
CSS0024507 Camellia sinensis var. sinensis HOM05D004530 ORTHO05D005839 4.5e-10 68.6 128 34.4
DCAR_029469 Daucus carota HOM05D004530 ORTHO05D005839 4.5e-10 68.6 133 38.3
Lalb_Chr12g0210571 Lupinus albus HOM05D004530 ORTHO05D005839 4.5e-10 68.6 141 34.0
Rhsim07G0036000 Rhododendron simsii HOM05D004530 ORTHO05D005839 4.5e-10 68.6 133 37.6
Lj3g0003084 Lotus japonicus HOM05D004530 ORTHO05D005839 5.9e-10 68.2 134 35.8
QL04p030285 Quercus lobata HOM05D004530 ORTHO05D005839 1.3e-09 67.0 141 36.9
AUR62013743 Chenopodium quinoa HOM05D004530 ORTHO05D005839 1.7e-09 66.6 141 33.3
Nn6g33827 Nelumbo nucifera HOM05D004530 ORTHO05D005839 1.7e-09 66.6 138 34.1
TPR.G23922 Trifolium pratense HOM05D004530 ORTHO05D005839 2.2e-09 66.2 140 34.3
Ah.05g173100 Amaranthus hybridus HOM05D004530 ORTHO05D005839 5.0e-09 65.1 143 32.9
TWI59G1339 Tripterygium wilfordii HOM05D004530 ORTHO05D005839 5.0e-09 65.1 144 35.4
Nn1g00849 Nelumbo nucifera HOM05D004530 ORTHO05D005839 6.5e-09 64.7 138 35.5
Sabra14G0034600 Salix brachista HOM05D004530 ORTHO05D005839 6.5e-09 64.7 124 35.5
unitig_26.g9593 Utricularia gibba HOM05D004530 ORTHO05D005839 6.5e-09 64.7 134 38.1
Ciclev10019258m.g Citrus clementina HOM05D004530 ORTHO05D005839 8.5e-09 64.3 141 34.0
Sopen01g036030 Solanum pennellii HOM05D004530 ORTHO05D005839 8.5e-09 64.3 124 38.7
MD07G1109200 Malus domestica HOM05D004530 ORTHO05D005839 1.1e-08 63.9 143 32.9
CsaV3_3G007220 Cucumis sativus L. HOM05D004530 ORTHO05D005839 1.5e-08 63.5 143 30.8
Sc26g0001580 Simmondsia chinensis HOM05D004530 ORTHO05D005839 1.5e-08 63.5 140 34.3
Solyc01g090230.3 Solanum lycopersicum HOM05D004530 ORTHO05D005839 3.2e-08 62.4 124 38.7
Duzib133G0606 Durio zibethinus HOM05D004530 ORTHO05D005839 4.2e-08 62.0 140 35.7
Hund27405 Selenicereus undatus HOM05D004530 ORTHO05D005839 4.2e-08 62.0 136 31.6
ATR0057G115 Amborella trichopoda HOM05D004530 ORTHO05D005839 5.5e-08 61.6 145 30.3
COL.COLO4_12407 Corchorus olitorius HOM05D004530 ORTHO05D005839 5.5e-08 61.6 141 34.8
Duzib138G0269 Durio zibethinus HOM05D004530 ORTHO05D005839 5.5e-08 61.6 140 34.3
Phvul.010G049900 Phaseolus vulgaris HOM05D004530 ORTHO05D005839 5.5e-08 61.6 142 31.7
Actinidia32503 Actinidia chinensis HOM05D004530 ORTHO05D037961 9.4e-08 60.8 91 37.4
CiPaw.13G026100 Carya illinoinensis HOM05D004530 ORTHO05D005839 9.4e-08 60.8 51 54.9
THA.LOC104817000 Tarenaya hassleriana HOM05D004530 ORTHO05D005839 9.4e-08 60.8 138 32.6
Atru.chr5.126 Acer truncatum HOM05D004530 ORTHO05D005839 1.2e-07 60.5 137 34.3
CARHR000210 Cardamine hirsuta HOM05D004530 ORTHO05D005839 1.2e-07 60.5 82 40.2
MELO3C005943.2 Cucumis melo HOM05D004530 ORTHO05D005839 1.2e-07 60.5 144 29.2
Gohir.A08G138600 Gossypium hirsutum HOM05D004530 ORTHO05D005839 1.2e-07 60.5 141 34.8
EL10Ac1g00762 Beta vulgaris HOM05D004530 ORTHO05D005839 1.6e-07 60.1 136 33.1
PGR042G2176 Punica granatum HOM05D004530 ORTHO05D005839 2.1e-07 59.7 147 31.3
Sed0010787 Sechium edule HOM05D004530 ORTHO05D005839 2.1e-07 59.7 141 32.6
VMungo0331G0336 Vigna mungo HOM05D004530 ORTHO05D005839 2.1e-07 59.7 142 31.0
Gorai.004G166100 Gossypium raimondii HOM05D004530 ORTHO05D005839 3.6e-07 58.9 141 34.8
Thecc.01G394900 Theobroma cacao HOM05D004530 ORTHO05D005839 4.7e-07 58.5 140 32.1
Aqoxy7G00763 Aquilegia oxysepala HOM05D004530 ORTHO05D005839 1.0e-06 57.4 139 31.7
AL1G10110 Arabidopsis lyrata HOM05D004530 ORTHO05D005839 1.0e-06 57.4 41 58.5
AUR62043872 Chenopodium quinoa HOM05D004530 ORTHO05D005839 1.0e-06 57.4 70 41.4
TAR375G0493 Trochodendron aralioides HOM05D004530 ORTHO05D005839 1.0e-06 57.4 139 33.1
MD02G1212800 Malus domestica HOM05D004530 ORTHO05D005839 1.4e-06 57.0 137 30.7
Hund17085 Selenicereus undatus HOM05D004530 ORTHO05D005839 1.4e-06 57.0 140 33.6
PSO675G1201 Papaver somniferum HOM05D004530 ORTHO05D005839 1.8e-06 56.6 143 31.5
BcaB03g13633 Brassica carinata HOM05D004530 ORTHO05D005839 3.0e-06 55.8 37 62.2
Carub.0001s0010 Capsella rubella HOM05D004530 ORTHO05D005839 4.0e-06 55.5 41 56.1
A10p00110 Brassica napus HOM05D004530 ORTHO05D005839 5.2e-06 55.1 58 44.8
C05p00080 Brassica napus HOM05D004530 ORTHO05D005839 5.2e-06 55.1 58 44.8
BolC5t28795H Brassica oleracea HOM05D004530 ORTHO05D005839 5.2e-06 55.1 58 44.8
BraA10t42289Z Brassica rapa HOM05D004530 ORTHO05D005839 5.2e-06 55.1 58 44.8
PSO732G0778 Papaver somniferum HOM05D004530 ORTHO05D005839 5.2e-06 55.1 143 32.2


User provided reference genes

Program Settings